RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 SF3A1Q15459 793 aaKnown RBP22.63■■□□□ 1.21
PHGDH-210ENST00000641115 TTC38Q5R3I4 469 aa22.63■■□□□ 1.21
PHGDH-210ENST00000641115 PAXIP1Q6ZW49 1069 aaPredicted RBP22.63■■□□□ 1.21
PHGDH-210ENST00000641115 FAM43AQ8N2R8 423 aa22.63■■□□□ 1.21
PHGDH-210ENST00000641115 SAMD3Q8N6K7 520 aa22.63■■□□□ 1.21
PHGDH-210ENST00000641115 LEO1Q8WVC0 666 aaPredicted RBP22.63■■□□□ 1.21
PHGDH-210ENST00000641115 BTBD7Q9P203 1132 aa22.63■■□□□ 1.21
PHGDH-210ENST00000641115 CEP131Q9UPN4 1083 aa22.63■■□□□ 1.21
PHGDH-210ENST00000641115 RIPK3Q9Y572 518 aa22.63■■□□□ 1.21
PHGDH-210ENST00000641115 MYH7BA7E2Y1 1941 aa22.63■■□□□ 1.21
PHGDH-210ENST00000641115 NFIBO00712 420 aa22.62■■□□□ 1.21
PHGDH-210ENST00000641115 CYP2C8P10632 490 aa22.62■■□□□ 1.21
PHGDH-210ENST00000641115 HOXA13P31271 388 aaPredicted RBP22.62■■□□□ 1.21
PHGDH-210ENST00000641115 NBR1Q14596 966 aa22.62■■□□□ 1.21
PHGDH-210ENST00000641115 MUM1L1Q5H9M0 696 aa22.62■■□□□ 1.21
PHGDH-210ENST00000641115 NEK8Q86SG6 692 aa22.62■■□□□ 1.21
PHGDH-210ENST00000641115 TBCKQ8TEA7 893 aa22.62■■□□□ 1.21
PHGDH-210ENST00000641115 PGBD1Q96JS3 809 aa22.62■■□□□ 1.21
PHGDH-210ENST00000641115 PARK7Q99497 189 aaKnown RBP22.62■■□□□ 1.21
PHGDH-210ENST00000641115 ANO3Q9BYT9 981 aa22.62■■□□□ 1.21
PHGDH-210ENST00000641115 MAP3K20Q9NYL2 800 aaKnown RBP22.62■■□□□ 1.21
PHGDH-210ENST00000641115 RABGAP1Q9Y3P9 1069 aa22.62■■□□□ 1.21
PHGDH-210ENST00000641115 ELP1O95163 1332 aa22.62■■□□□ 1.21
PHGDH-210ENST00000641115 FAM155AB1AL88 458 aaPredicted RBP22.61■■□□□ 1.21
PHGDH-210ENST00000641115 PRPF40AO75400 957 aaKnown RBP22.61■■□□□ 1.21
PHGDH-210ENST00000641115 HSD17B4P51659 736 aa22.61■■□□□ 1.21
PHGDH-210ENST00000641115 INHBEP58166 350 aa22.61■■□□□ 1.21
PHGDH-210ENST00000641115 POTEEQ6S8J3 1075 aa22.61■■□□□ 1.21
PHGDH-210ENST00000641115 PTPN18Q99952 460 aa22.61■■□□□ 1.21
PHGDH-210ENST00000641115 SPATC1LQ9H0A9 340 aa22.61■■□□□ 1.21
PHGDH-210ENST00000641115 ACAD9Q9H845 621 aa22.61■■□□□ 1.21
PHGDH-210ENST00000641115 PCDHB6Q9Y5E3 794 aa22.61■■□□□ 1.21
PHGDH-210ENST00000641115 BMP15O95972 392 aa22.6■■□□□ 1.21
PHGDH-210ENST00000641115 APLP1P51693 650 aa22.6■■□□□ 1.21
PHGDH-210ENST00000641115 GHRHRQ02643 423 aa22.6■■□□□ 1.21
PHGDH-210ENST00000641115 SREBF2Q12772 1141 aa22.6■■□□□ 1.21
PHGDH-210ENST00000641115 RIOX2Q8IUF8 465 aa22.6■■□□□ 1.21
PHGDH-210ENST00000641115 LINC00301Q8NCQ3 95 aa22.6■■□□□ 1.21
PHGDH-210ENST00000641115 KCNG4Q8TDN1 519 aa22.6■■□□□ 1.21
PHGDH-210ENST00000641115 ZCCHC17Q9NP64 241 aaKnown RBP22.6■■□□□ 1.21
PHGDH-210ENST00000641115 CREBZFQ9NS37 354 aa22.6■■□□□ 1.21
PHGDH-210ENST00000641115 RCOR1Q9UKL0 485 aa22.6■■□□□ 1.21
PHGDH-210ENST00000641115 COPB2P35606 906 aa22.6■■□□□ 1.21
PHGDH-210ENST00000641115 FCHSD1Q86WN1 690 aa22.6■■□□□ 1.21
PHGDH-210ENST00000641115 CHST13Q8NET6 341 aa22.6■■□□□ 1.21
PHGDH-210ENST00000641115 TBC1D5Q92609 795 aa22.6■■□□□ 1.21
PHGDH-210ENST00000641115 EHMT1Q9H9B1 1298 aa22.6■■□□□ 1.21
PHGDH-210ENST00000641115 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.6■■□□□ 1.21
PHGDH-210ENST00000641115 FBXO40Q9UH90 709 aa22.6■■□□□ 1.21
PHGDH-210ENST00000641115 CNMDO75829 334 aa22.59■■□□□ 1.21
PHGDH-210ENST00000641115 GCLCP48506 637 aaPredicted RBP22.59■■□□□ 1.21
PHGDH-210ENST00000641115 SLC39A14Q15043 492 aa22.59■■□□□ 1.21
PHGDH-210ENST00000641115 LETM2Q2VYF4 491 aa22.59■■□□□ 1.21
PHGDH-210ENST00000641115 NSMFQ6X4W1 530 aa22.59■■□□□ 1.21
PHGDH-210ENST00000641115 RNF207Q6ZRF8 634 aa22.59■■□□□ 1.21
PHGDH-210ENST00000641115 MAF1Q9H063 256 aa22.59■■□□□ 1.21
PHGDH-210ENST00000641115 LMBRD1Q9NUN5 540 aa22.59■■□□□ 1.21
PHGDH-210ENST00000641115 RBPJLQ9UBG7 517 aa22.59■■□□□ 1.21
PHGDH-210ENST00000641115 SPTLC2O15270 562 aa22.58■■□□□ 1.21
PHGDH-210ENST00000641115 SLC25A27O95847 323 aa22.58■■□□□ 1.21
PHGDH-210ENST00000641115 GRM1Q13255 1194 aa22.58■■□□□ 1.21
PHGDH-210ENST00000641115 PTPAQ15257 358 aa22.58■■□□□ 1.21
PHGDH-210ENST00000641115 ZNF174Q15697 407 aa22.58■■□□□ 1.21
PHGDH-210ENST00000641115 JMYQ8N9B5 988 aa22.58■■□□□ 1.21
PHGDH-210ENST00000641115 TXNRD2Q9NNW7 524 aa22.58■■□□□ 1.21
PHGDH-210ENST00000641115 WNT7AO00755 349 aa22.57■■□□□ 1.2
PHGDH-210ENST00000641115 CCNT1O60563 726 aaKnown RBP22.57■■□□□ 1.2
PHGDH-210ENST00000641115 PEX10O60683 326 aa22.57■■□□□ 1.2
PHGDH-210ENST00000641115 MCM7P33993 719 aa22.57■■□□□ 1.2
PHGDH-210ENST00000641115 ME1P48163 572 aa22.57■■□□□ 1.2
PHGDH-210ENST00000641115 CYP4F22Q6NT55 531 aa22.57■■□□□ 1.2
PHGDH-210ENST00000641115 NCAPG2Q86XI2 1143 aa22.57■■□□□ 1.2
PHGDH-210ENST00000641115 NAP1L4Q99733 375 aaKnown RBP22.57■■□□□ 1.2
PHGDH-210ENST00000641115 MOV10L1Q9BXT6 1211 aaKnown RBP22.57■■□□□ 1.2
PHGDH-210ENST00000641115 GOLGA6L4A6NEF3 574 aa22.57■■□□□ 1.2
PHGDH-210ENST00000641115 IGF2BP3O00425 579 aaKnown RBP eCLIP22.57■■□□□ 1.2
PHGDH-210ENST00000641115 SREBF1P36956 1147 aa22.57■■□□□ 1.2
PHGDH-210ENST00000641115 RPS6P62753 249 aaKnown RBP22.57■■□□□ 1.2
PHGDH-210ENST00000641115 ERVK-9P63128 1117 aa22.57■■□□□ 1.2
PHGDH-210ENST00000641115 ERVK-24P63145 666 aa22.57■■□□□ 1.2
PHGDH-210ENST00000641115 ORC2Q13416 577 aaPredicted RBP22.57■■□□□ 1.2
PHGDH-210ENST00000641115 DEFB115Q30KQ5 88 aa22.57■■□□□ 1.2
PHGDH-210ENST00000641115 RASSF10A6NK89 507 aa22.56■■□□□ 1.2
PHGDH-210ENST00000641115 PPP6R2O75170 966 aa22.56■■□□□ 1.2
PHGDH-210ENST00000641115 CCNA1P78396 465 aa22.56■■□□□ 1.2
PHGDH-210ENST00000641115 ARHGAP4P98171 946 aa22.56■■□□□ 1.2
PHGDH-210ENST00000641115 SLC30A10Q6XR72 485 aa22.56■■□□□ 1.2
PHGDH-210ENST00000641115 IFNL1Q8IU54 200 aa22.56■■□□□ 1.2
PHGDH-210ENST00000641115 GPRC5AQ8NFJ5 357 aa22.56■■□□□ 1.2
PHGDH-210ENST00000641115 GCFC2P16383 781 aaKnown RBP22.55■■□□□ 1.2
PHGDH-210ENST00000641115 USP11P51784 963 aa22.55■■□□□ 1.2
PHGDH-210ENST00000641115 UBE2HP62256 183 aa22.55■■□□□ 1.2
PHGDH-210ENST00000641115 NOGQ13253 232 aa22.55■■□□□ 1.2
PHGDH-210ENST00000641115 ANKRD13CQ8N6S4 541 aa22.55■■□□□ 1.2
PHGDH-210ENST00000641115 SYTL5Q8TDW5 730 aaPredicted RBP22.55■■□□□ 1.2
PHGDH-210ENST00000641115 PFASO15067 1338 aa22.54■■□□□ 1.2
PHGDH-210ENST00000641115 ERCC3P19447 782 aa22.54■■□□□ 1.2
PHGDH-210ENST00000641115 MARCKSP29966 332 aaPredicted RBP22.54■■□□□ 1.2
PHGDH-210ENST00000641115 PTGDRQ13258 359 aa22.54■■□□□ 1.2
PHGDH-210ENST00000641115 BAATQ14032 418 aaPredicted RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms