RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 IWS1Q96ST2 819 aa16.52■□□□□ 0.24
SDHD-209ENST00000640554 LRRC2Q9BYS8 371 aa16.52■□□□□ 0.24
SDHD-209ENST00000640554 XPNPEP3Q9NQH7 507 aa16.52■□□□□ 0.24
SDHD-209ENST00000640554 SEC63Q9UGP8 760 aaKnown RBP16.52■□□□□ 0.24
SDHD-209ENST00000640554 CCDC196A0A1B0GTZ2 297 aa16.51■□□□□ 0.23
SDHD-209ENST00000640554 ZBTB43O43298 467 aa16.51■□□□□ 0.23
SDHD-209ENST00000640554 RPS6KB1P23443 525 aa16.51■□□□□ 0.23
SDHD-209ENST00000640554 CCDC144BQ3MJ40 725 aa16.51■□□□□ 0.23
SDHD-209ENST00000640554 HOMER1Q86YM7 354 aa16.51■□□□□ 0.23
SDHD-209ENST00000640554 TEX2Q8IWB9 1127 aa16.51■□□□□ 0.23
SDHD-209ENST00000640554 NSUN6Q8TEA1 469 aaKnown RBP16.51■□□□□ 0.23
SDHD-209ENST00000640554 TSEN34Q9BSV6 310 aaKnown RBP16.51■□□□□ 0.23
SDHD-209ENST00000640554 MYL10Q9BUA6 226 aa16.51■□□□□ 0.23
SDHD-209ENST00000640554 KATNBL1Q9H079 304 aa16.51■□□□□ 0.23
SDHD-209ENST00000640554 Q9Y3F1 56 aa16.51■□□□□ 0.23
SDHD-209ENST00000640554 EDNRBP24530 442 aa16.5■□□□□ 0.23
SDHD-209ENST00000640554 HSD17B4P51659 736 aa16.5■□□□□ 0.23
SDHD-209ENST00000640554 PDE4DQ08499 809 aa16.5■□□□□ 0.23
SDHD-209ENST00000640554 LRRC41Q15345 812 aa16.5■□□□□ 0.23
SDHD-209ENST00000640554 SLC35G1Q2M3R5 365 aa16.5■□□□□ 0.23
SDHD-209ENST00000640554 SLC30A10Q6XR72 485 aa16.5■□□□□ 0.23
SDHD-209ENST00000640554 SYTL5Q8TDW5 730 aaPredicted RBP16.5■□□□□ 0.23
SDHD-209ENST00000640554 DIS3LQ8TF46 1054 aaKnown RBP16.5■□□□□ 0.23
SDHD-209ENST00000640554 AGXT2Q9BYV1 514 aa16.5■□□□□ 0.23
SDHD-209ENST00000640554 ZSWIM6Q9HCJ5 1215 aa16.5■□□□□ 0.23
SDHD-209ENST00000640554 ZNFX1Q9P2E3 1918 aaKnown RBP16.5■□□□□ 0.23
SDHD-209ENST00000640554 GCOM1H8Y6P7 765 aaPredicted RBP16.49■□□□□ 0.23
SDHD-209ENST00000640554 EVI5O60447 810 aa16.49■□□□□ 0.23
SDHD-209ENST00000640554 PPP1R11O60927 126 aaPredicted RBP16.49■□□□□ 0.23
SDHD-209ENST00000640554 CFBP00751 764 aa16.49■□□□□ 0.23
SDHD-209ENST00000640554 POLR2MP0CAP2 368 aa16.49■□□□□ 0.23
SDHD-209ENST00000640554 CASTP20810 708 aaKnown RBP16.49■□□□□ 0.23
SDHD-209ENST00000640554 ANAPC15P60006 121 aa16.49■□□□□ 0.23
SDHD-209ENST00000640554 NKX3-2P78367 333 aa16.49■□□□□ 0.23
SDHD-209ENST00000640554 TNFAIP2Q03169 654 aa16.49■□□□□ 0.23
SDHD-209ENST00000640554 COL9A3Q14050 684 aaPredicted RBP16.49■□□□□ 0.23
SDHD-209ENST00000640554 Q6ZUG5 572 aa16.49■□□□□ 0.23
SDHD-209ENST00000640554 TMTC3Q6ZXV5 915 aa16.49■□□□□ 0.23
SDHD-209ENST00000640554 RUFY3Q7L099 469 aa16.49■□□□□ 0.23
SDHD-209ENST00000640554 MICU3Q86XE3 530 aa16.49■□□□□ 0.23
SDHD-209ENST00000640554 SRBD1Q8N5C6 995 aaKnown RBP16.49■□□□□ 0.23
SDHD-209ENST00000640554 PCSK9Q8NBP7 692 aaKnown RBP16.49■□□□□ 0.23
SDHD-209ENST00000640554 RMDN3Q96TC7 470 aa16.49■□□□□ 0.23
SDHD-209ENST00000640554 CYP46A1Q9Y6A2 500 aa16.49■□□□□ 0.23
SDHD-209ENST00000640554 ASTN1O14525 1302 aa16.48■□□□□ 0.23
SDHD-209ENST00000640554 KLF18A0A0U1RQI7 1052 aa16.48■□□□□ 0.23
SDHD-209ENST00000640554 RBM47A0AV96 593 aaKnown RBP16.48■□□□□ 0.23
SDHD-209ENST00000640554 CST5P28325 142 aaPredicted RBP16.48■□□□□ 0.23
SDHD-209ENST00000640554 GJA9P57773 515 aa16.48■□□□□ 0.23
SDHD-209ENST00000640554 RTN1Q16799 776 aa16.48■□□□□ 0.23
SDHD-209ENST00000640554 GJC2Q5T442 439 aaPredicted RBP16.48■□□□□ 0.23
SDHD-209ENST00000640554 ANO1Q5XXA6 986 aa16.48■□□□□ 0.23
SDHD-209ENST00000640554 TAPT1Q6NXT6 567 aa16.48■□□□□ 0.23
SDHD-209ENST00000640554 SENP6Q9GZR1 1112 aaPredicted RBP16.48■□□□□ 0.23
SDHD-209ENST00000640554 UPF3AQ9H1J1 476 aaKnown RBP16.48■□□□□ 0.23
SDHD-209ENST00000640554 BRPF3Q9ULD4 1205 aa16.48■□□□□ 0.23
SDHD-209ENST00000640554 MOXD2PA6NHM9 499 aa16.47■□□□□ 0.23
SDHD-209ENST00000640554 NKRFO15226 690 aaKnown RBP eCLIP16.47■□□□□ 0.23
SDHD-209ENST00000640554 ADAMTS4O75173 837 aa16.47■□□□□ 0.23
SDHD-209ENST00000640554 PLEKHA8P1O95397 391 aa16.47■□□□□ 0.23
SDHD-209ENST00000640554 EVCP57679 992 aa16.47■□□□□ 0.23
SDHD-209ENST00000640554 STXBP2Q15833 593 aa16.47■□□□□ 0.23
SDHD-209ENST00000640554 ARHGEF16Q5VV41 709 aa16.47■□□□□ 0.23
SDHD-209ENST00000640554 NOL8Q76FK4 1167 aaKnown RBP16.47■□□□□ 0.23
SDHD-209ENST00000640554 KLHDC9Q8NEP7 349 aa16.47■□□□□ 0.23
SDHD-209ENST00000640554 SCFD2Q8WU76 684 aa16.47■□□□□ 0.23
SDHD-209ENST00000640554 TBC1D5Q92609 795 aa16.47■□□□□ 0.23
SDHD-209ENST00000640554 BRF1Q92994 677 aa16.47■□□□□ 0.23
SDHD-209ENST00000640554 TCEANC2Q96MN5 208 aa16.47■□□□□ 0.23
SDHD-209ENST00000640554 PURBQ96QR8 312 aaKnown RBP16.47■□□□□ 0.23
SDHD-209ENST00000640554 TAAR1Q96RJ0 339 aa16.47■□□□□ 0.23
SDHD-209ENST00000640554 AP5M1Q9H0R1 490 aa16.47■□□□□ 0.23
SDHD-209ENST00000640554 RBM27Q9P2N5 1060 aaKnown RBP16.47■□□□□ 0.23
SDHD-209ENST00000640554 PHF24Q9UPV7 400 aa16.47■□□□□ 0.23
SDHD-209ENST00000640554 GOLGA8AA7E2F4 631 aa16.46■□□□□ 0.23
SDHD-209ENST00000640554 GOLGA8BA8MQT2 603 aa16.46■□□□□ 0.23
SDHD-209ENST00000640554 hCG_1984214I3L0E3 225 aa16.46■□□□□ 0.23
SDHD-209ENST00000640554 OPLAHO14841 1288 aa16.46■□□□□ 0.23
SDHD-209ENST00000640554 ZEB2O60315 1214 aa16.46■□□□□ 0.23
SDHD-209ENST00000640554 EIF3JO75822 258 aaKnown RBP16.46■□□□□ 0.23
SDHD-209ENST00000640554 PGK1P00558 417 aa16.46■□□□□ 0.23
SDHD-209ENST00000640554 RXRAP19793 462 aa16.46■□□□□ 0.23
SDHD-209ENST00000640554 DUSP28Q4G0W2 176 aa16.46■□□□□ 0.23
SDHD-209ENST00000640554 C1orf53Q5VUE5 145 aa16.46■□□□□ 0.23
SDHD-209ENST00000640554 ZNF713Q8N859 430 aaPredicted RBP16.46■□□□□ 0.23
SDHD-209ENST00000640554 CUL5Q93034 780 aa16.46■□□□□ 0.23
SDHD-209ENST00000640554 GNEQ9Y223 722 aaKnown RBP16.46■□□□□ 0.23
SDHD-209ENST00000640554 BRCA2P51587 3418 aa16.46■□□□□ 0.23
SDHD-209ENST00000640554 SYNRGQ9UMZ2 1314 aa16.45■□□□□ 0.22
SDHD-209ENST00000640554 PIK3CDO00329 1044 aa16.45■□□□□ 0.22
SDHD-209ENST00000640554 MYCNP04198 464 aaPredicted RBP16.45■□□□□ 0.22
SDHD-209ENST00000640554 C6orf222P0C671 652 aaPredicted RBP16.45■□□□□ 0.22
SDHD-209ENST00000640554 ADCYAP1R1P41586 468 aa16.45■□□□□ 0.22
SDHD-209ENST00000640554 METAP2P50579 478 aaKnown RBP eCLIP16.45■□□□□ 0.22
SDHD-209ENST00000640554 TTLL4Q14679 1199 aa16.45■□□□□ 0.22
SDHD-209ENST00000640554 GNASQ5JWF2 1037 aa16.45■□□□□ 0.22
SDHD-209ENST00000640554 FBXO16Q8IX29 292 aaPredicted RBP16.45■□□□□ 0.22
SDHD-209ENST00000640554 SEZ6LQ9BYH1 1024 aa16.45■□□□□ 0.22
SDHD-209ENST00000640554 WDR11Q9BZH6 1224 aa16.45■□□□□ 0.22
SDHD-209ENST00000640554 GLT8D2Q9H1C3 349 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms