RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 HOXA13P31271 388 aaPredicted RBP24.57■■□□□ 1.52
SCARB2-212ENST00000638663 ZNF280CQ8ND82 737 aa24.57■■□□□ 1.52
SCARB2-212ENST00000638663 MTMR9Q96QG7 549 aa24.57■■□□□ 1.52
SCARB2-212ENST00000638663 TXKP42681 527 aa24.56■■□□□ 1.52
SCARB2-212ENST00000638663 BACE1P56817 501 aa24.56■■□□□ 1.52
SCARB2-212ENST00000638663 IQUBQ8NA54 791 aa24.56■■□□□ 1.52
SCARB2-212ENST00000638663 PRPF38AQ8NAV1 312 aaKnown RBP24.56■■□□□ 1.52
SCARB2-212ENST00000638663 L3MBTL3Q96JM7 780 aaPredicted RBP24.56■■□□□ 1.52
SCARB2-212ENST00000638663 DDX25Q9UHL0 483 aaKnown RBP24.56■■□□□ 1.52
SCARB2-212ENST00000638663 USP2O75604 605 aaPredicted RBP24.55■■□□□ 1.52
SCARB2-212ENST00000638663 TECP42680 631 aa24.55■■□□□ 1.52
SCARB2-212ENST00000638663 AFMP43652 599 aa24.55■■□□□ 1.52
SCARB2-212ENST00000638663 PLCB2Q00722 1185 aa24.55■■□□□ 1.52
SCARB2-212ENST00000638663 KARSQ15046 597 aaKnown RBP24.55■■□□□ 1.52
SCARB2-212ENST00000638663 E2F4Q16254 413 aa24.55■■□□□ 1.52
SCARB2-212ENST00000638663 MCTP2Q6DN12 878 aa24.55■■□□□ 1.52
SCARB2-212ENST00000638663 PAGE5Q96GU1 130 aa24.55■■□□□ 1.52
SCARB2-212ENST00000638663 CCDC34Q96HJ3 373 aa24.55■■□□□ 1.52
SCARB2-212ENST00000638663 SPDYE3A6NKU9 549 aa24.55■■□□□ 1.52
SCARB2-212ENST00000638663 UBA7P41226 1012 aa24.55■■□□□ 1.52
SCARB2-212ENST00000638663 IQCB1Q15051 598 aa24.55■■□□□ 1.52
SCARB2-212ENST00000638663 LDHDQ86WU2 507 aa24.55■■□□□ 1.52
SCARB2-212ENST00000638663 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.55■■□□□ 1.52
SCARB2-212ENST00000638663 PYM1Q9BRP8 204 aaKnown RBP24.55■■□□□ 1.52
SCARB2-212ENST00000638663 RPAP3Q9H6T3 665 aaPredicted RBP24.55■■□□□ 1.52
SCARB2-212ENST00000638663 FLOT1O75955 427 aa24.54■■□□□ 1.52
SCARB2-212ENST00000638663 FOSP01100 380 aaPredicted RBP24.54■■□□□ 1.52
SCARB2-212ENST00000638663 GCFC2P16383 781 aaKnown RBP24.54■■□□□ 1.52
SCARB2-212ENST00000638663 KRT26Q7Z3Y9 468 aa24.54■■□□□ 1.52
SCARB2-212ENST00000638663 PDLIM2Q96JY6 352 aa24.54■■□□□ 1.52
SCARB2-212ENST00000638663 AK8Q96MA6 479 aa24.54■■□□□ 1.52
SCARB2-212ENST00000638663 NAT10Q9H0A0 1025 aaKnown RBP24.54■■□□□ 1.52
SCARB2-212ENST00000638663 MRPL11Q9Y3B7 192 aaKnown RBP24.54■■□□□ 1.52
SCARB2-212ENST00000638663 PIK3CDO00329 1044 aa24.53■■□□□ 1.52
SCARB2-212ENST00000638663 CFBP00751 764 aa24.53■■□□□ 1.52
SCARB2-212ENST00000638663 EPHX2P34913 555 aa24.53■■□□□ 1.52
SCARB2-212ENST00000638663 USP11P51784 963 aa24.53■■□□□ 1.52
SCARB2-212ENST00000638663 NOL9Q5SY16 702 aaKnown RBP24.53■■□□□ 1.52
SCARB2-212ENST00000638663 SH3RF1Q7Z6J0 888 aa24.53■■□□□ 1.52
SCARB2-212ENST00000638663 RASSF8Q8NHQ8 419 aa24.53■■□□□ 1.52
SCARB2-212ENST00000638663 TBC1D5Q92609 795 aa24.53■■□□□ 1.52
SCARB2-212ENST00000638663 SMARCE1Q969G3 411 aa24.53■■□□□ 1.52
SCARB2-212ENST00000638663 AGBL1Q96MI9 1066 aa24.53■■□□□ 1.52
SCARB2-212ENST00000638663 NAP1L4Q99733 375 aaKnown RBP24.53■■□□□ 1.52
SCARB2-212ENST00000638663 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.53■■□□□ 1.52
SCARB2-212ENST00000638663 HMGCS2P54868 508 aa24.53■■□□□ 1.52
SCARB2-212ENST00000638663 ARHGAP4P98171 946 aa24.53■■□□□ 1.52
SCARB2-212ENST00000638663 PDXDC2PQ6P474 469 aa24.53■■□□□ 1.52
SCARB2-212ENST00000638663 CCSER1Q9C0I3 900 aa24.53■■□□□ 1.52
SCARB2-212ENST00000638663 DISC1Q9NRI5 854 aa24.53■■□□□ 1.52
SCARB2-212ENST00000638663 ABCB11O95342 1321 aa24.53■■□□□ 1.52
SCARB2-212ENST00000638663 AP5Z1O43299 807 aa24.52■■□□□ 1.52
SCARB2-212ENST00000638663 ICAM1P05362 532 aa24.52■■□□□ 1.52
SCARB2-212ENST00000638663 USP50Q70EL3 339 aaPredicted RBP24.52■■□□□ 1.52
SCARB2-212ENST00000638663 FCHSD1Q86WN1 690 aa24.52■■□□□ 1.52
SCARB2-212ENST00000638663 CRYGNQ8WXF5 182 aa24.52■■□□□ 1.52
SCARB2-212ENST00000638663 STAMQ92783 540 aa24.52■■□□□ 1.52
SCARB2-212ENST00000638663 CCPG1Q9ULG6 757 aa24.52■■□□□ 1.52
SCARB2-212ENST00000638663 ZNF536O15090 1300 aa24.52■■□□□ 1.52
SCARB2-212ENST00000638663 GLTPD2A6NH11 291 aa24.51■■□□□ 1.51
SCARB2-212ENST00000638663 CASP1P29466 404 aa24.51■■□□□ 1.51
SCARB2-212ENST00000638663 STAT6P42226 847 aa24.51■■□□□ 1.51
SCARB2-212ENST00000638663 CABP7Q86V35 215 aa24.51■■□□□ 1.51
SCARB2-212ENST00000638663 DHX40Q8IX18 779 aaKnown RBP24.51■■□□□ 1.51
SCARB2-212ENST00000638663 IGSF22Q8N9C0 903 aa24.51■■□□□ 1.51
SCARB2-212ENST00000638663 PLIN2Q99541 437 aa24.51■■□□□ 1.51
SCARB2-212ENST00000638663 MAN1B1Q9UKM7 699 aa24.51■■□□□ 1.51
SCARB2-212ENST00000638663 PPP1R9AQ9ULJ8 1098 aa24.51■■□□□ 1.51
SCARB2-212ENST00000638663 BECN2A8MW95 431 aa24.51■■□□□ 1.51
SCARB2-212ENST00000638663 GCOM1H8Y6P7 765 aaPredicted RBP24.51■■□□□ 1.51
SCARB2-212ENST00000638663 GRIN3BO60391 1043 aa24.51■■□□□ 1.51
SCARB2-212ENST00000638663 ADCY5O95622 1261 aa24.51■■□□□ 1.51
SCARB2-212ENST00000638663 POLR2MP0CAP2 368 aa24.51■■□□□ 1.51
SCARB2-212ENST00000638663 SREBF1P36956 1147 aa24.51■■□□□ 1.51
SCARB2-212ENST00000638663 SARSP49591 514 aaKnown RBP24.51■■□□□ 1.51
SCARB2-212ENST00000638663 TMEM266Q2M3C6 531 aa24.51■■□□□ 1.51
SCARB2-212ENST00000638663 NT5DC1Q5TFE4 455 aa24.51■■□□□ 1.51
SCARB2-212ENST00000638663 RRAGBQ5VZM2 374 aa24.51■■□□□ 1.51
SCARB2-212ENST00000638663 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.51■■□□□ 1.51
SCARB2-212ENST00000638663 AOPEPQ8N6M6 819 aa24.51■■□□□ 1.51
SCARB2-212ENST00000638663 CCDC39Q9UFE4 941 aa24.51■■□□□ 1.51
SCARB2-212ENST00000638663 GOLGA6L19H0YKK7 550 aa24.5■■□□□ 1.51
SCARB2-212ENST00000638663 MARCH6O60337 910 aa24.5■■□□□ 1.51
SCARB2-212ENST00000638663 FXR2P51116 673 aaKnown RBP eCLIP24.5■■□□□ 1.51
SCARB2-212ENST00000638663 MAP3K9P80192 1104 aa24.5■■□□□ 1.51
SCARB2-212ENST00000638663 CPXCR1Q8N123 301 aa24.5■■□□□ 1.51
SCARB2-212ENST00000638663 HAS1Q92839 578 aa24.5■■□□□ 1.51
SCARB2-212ENST00000638663 GJA10Q969M2 543 aa24.5■■□□□ 1.51
SCARB2-212ENST00000638663 SLC38A10Q9HBR0 1119 aa24.5■■□□□ 1.51
SCARB2-212ENST00000638663 PHIPQ8WWQ0 1821 aa24.5■■□□□ 1.51
SCARB2-212ENST00000638663 CYP3A7-CYP3A51PA0A087WV96 503 aa24.49■■□□□ 1.51
SCARB2-212ENST00000638663 C19orf81C9J6K1 198 aa24.49■■□□□ 1.51
SCARB2-212ENST00000638663 PPP1R12BO60237 982 aaPredicted RBP24.49■■□□□ 1.51
SCARB2-212ENST00000638663 SMC2O95347 1197 aa24.49■■□□□ 1.51
SCARB2-212ENST00000638663 CYP3A7P24462 503 aa24.49■■□□□ 1.51
SCARB2-212ENST00000638663 VGLL4Q14135 290 aa24.49■■□□□ 1.51
SCARB2-212ENST00000638663 SPATA20Q8TB22 786 aa24.49■■□□□ 1.51
SCARB2-212ENST00000638663 TTC12Q9H892 705 aaPredicted RBP24.49■■□□□ 1.51
SCARB2-212ENST00000638663 RAVER2Q9HCJ3 691 aaKnown RBP24.49■■□□□ 1.51
SCARB2-212ENST00000638663 LRWD1Q9UFC0 647 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms