RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 MYL10Q9BUA6 226 aa16.2■□□□□ 0.18
SNRPA1-216ENST00000626000 UPF2Q9HAU5 1272 aaKnown RBP16.2■□□□□ 0.18
SNRPA1-216ENST00000626000 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-216ENST00000626000 FAM184BQ9ULE4 1060 aa16.2■□□□□ 0.18
SNRPA1-216ENST00000626000 CYTH3O43739 400 aa16.19■□□□□ 0.18
SNRPA1-216ENST00000626000 FARP2O94887 1054 aaPredicted RBP16.19■□□□□ 0.18
SNRPA1-216ENST00000626000 RARBP10826 455 aa16.19■□□□□ 0.18
SNRPA1-216ENST00000626000 CALML3P27482 149 aa16.19■□□□□ 0.18
SNRPA1-216ENST00000626000 CCND3P30281 292 aaPredicted RBP16.19■□□□□ 0.18
SNRPA1-216ENST00000626000 METAP2P50579 478 aaKnown RBP eCLIP16.19■□□□□ 0.18
SNRPA1-216ENST00000626000 MORC4Q8TE76 937 aa16.19■□□□□ 0.18
SNRPA1-216ENST00000626000 NSUN6Q8TEA1 469 aaKnown RBP16.19■□□□□ 0.18
SNRPA1-216ENST00000626000 TCEANC2Q96MN5 208 aa16.19■□□□□ 0.18
SNRPA1-216ENST00000626000 IWS1Q96ST2 819 aa16.19■□□□□ 0.18
SNRPA1-216ENST00000626000 HTATIP2Q9BUP3 242 aa16.19■□□□□ 0.18
SNRPA1-216ENST00000626000 VTA1Q9NP79 307 aa16.19■□□□□ 0.18
SNRPA1-216ENST00000626000 ALDH5A1P51649 535 aaPredicted RBP16.18■□□□□ 0.18
SNRPA1-216ENST00000626000 CNTN2Q02246 1040 aa16.18■□□□□ 0.18
SNRPA1-216ENST00000626000 ACVR2BQ13705 512 aa16.18■□□□□ 0.18
SNRPA1-216ENST00000626000 CPLX2Q6PUV4 134 aaKnown RBP16.18■□□□□ 0.18
SNRPA1-216ENST00000626000 NECAB2Q7Z6G3 386 aa16.18■□□□□ 0.18
SNRPA1-216ENST00000626000 CCDC144CPQ8IYA2 1237 aa16.18■□□□□ 0.18
SNRPA1-216ENST00000626000 CUL5Q93034 780 aa16.18■□□□□ 0.18
SNRPA1-216ENST00000626000 SHISA4Q96DD7 197 aa16.18■□□□□ 0.18
SNRPA1-216ENST00000626000 GLT8D2Q9H1C3 349 aa16.18■□□□□ 0.18
SNRPA1-216ENST00000626000 RNF39Q9H2S5 420 aa16.18■□□□□ 0.18
SNRPA1-216ENST00000626000 SPC25Q9HBM1 224 aa16.18■□□□□ 0.18
SNRPA1-216ENST00000626000 NAP1L2Q9ULW6 460 aaPredicted RBP16.18■□□□□ 0.18
SNRPA1-216ENST00000626000 FRMPD3Q5JV73 1810 aa16.17■□□□□ 0.18
SNRPA1-216ENST00000626000 SOWAHBA6NEL2 793 aa16.17■□□□□ 0.18
SNRPA1-216ENST00000626000 GCOM1H8Y6P7 765 aaPredicted RBP16.17■□□□□ 0.18
SNRPA1-216ENST00000626000 DNM1LO00429 736 aa16.17■□□□□ 0.18
SNRPA1-216ENST00000626000 SNAI1O95863 264 aaPredicted RBP16.17■□□□□ 0.18
SNRPA1-216ENST00000626000 POLR2MP0CAP2 368 aa16.17■□□□□ 0.18
SNRPA1-216ENST00000626000 HSD17B4P51659 736 aa16.17■□□□□ 0.18
SNRPA1-216ENST00000626000 PDE4DQ08499 809 aa16.17■□□□□ 0.18
SNRPA1-216ENST00000626000 PPP1R18Q6NYC8 613 aa16.17■□□□□ 0.18
SNRPA1-216ENST00000626000 SLC30A10Q6XR72 485 aa16.17■□□□□ 0.18
SNRPA1-216ENST00000626000 SRBD1Q8N5C6 995 aaKnown RBP16.17■□□□□ 0.18
SNRPA1-216ENST00000626000 ZNF274Q96GC6 653 aaPredicted RBP16.17■□□□□ 0.18
SNRPA1-216ENST00000626000 FGD4Q96M96 766 aa16.17■□□□□ 0.18
SNRPA1-216ENST00000626000 ALDH8A1Q9H2A2 487 aaPredicted RBP16.17■□□□□ 0.18
SNRPA1-216ENST00000626000 PDRG1Q9NUG6 133 aa16.17■□□□□ 0.18
SNRPA1-216ENST00000626000 ZHX1Q9UKY1 873 aaPredicted RBP16.17■□□□□ 0.18
SNRPA1-216ENST00000626000 BRPF3Q9ULD4 1205 aa16.17■□□□□ 0.18
SNRPA1-216ENST00000626000 SMCHD1A6NHR9 2005 aa16.16■□□□□ 0.18
SNRPA1-216ENST00000626000 KBTBD13C9JR72 458 aa16.16■□□□□ 0.18
SNRPA1-216ENST00000626000 DUSP11O75319 330 aaKnown RBP16.16■□□□□ 0.18
SNRPA1-216ENST00000626000 PLEKHA8P1O95397 391 aa16.16■□□□□ 0.18
SNRPA1-216ENST00000626000 CFBP00751 764 aa16.16■□□□□ 0.18
SNRPA1-216ENST00000626000 ZNF865P0CJ78 1059 aaPredicted RBP16.16■□□□□ 0.18
SNRPA1-216ENST00000626000 RXRAP19793 462 aa16.16■□□□□ 0.18
SNRPA1-216ENST00000626000 AKAP17AQ02040 695 aaKnown RBP16.16■□□□□ 0.18
SNRPA1-216ENST00000626000 APOBRQ0VD83 1088 aa16.16■□□□□ 0.18
SNRPA1-216ENST00000626000 LHX8Q68G74 356 aa16.16■□□□□ 0.18
SNRPA1-216ENST00000626000 RNF180Q86T96 592 aa16.16■□□□□ 0.18
SNRPA1-216ENST00000626000 TRPV1Q8NER1 839 aa16.16■□□□□ 0.18
SNRPA1-216ENST00000626000 SYTL5Q8TDW5 730 aaPredicted RBP16.16■□□□□ 0.18
SNRPA1-216ENST00000626000 CCDC12Q8WUD4 166 aaPredicted RBP16.16■□□□□ 0.18
SNRPA1-216ENST00000626000 BAZ2BQ9UIF8 2168 aaKnown RBP16.16■□□□□ 0.18
SNRPA1-216ENST00000626000 PIK3CDO00329 1044 aa16.15■□□□□ 0.18
SNRPA1-216ENST00000626000 PPP1R11O60927 126 aaPredicted RBP16.15■□□□□ 0.18
SNRPA1-216ENST00000626000 EDNRBP24530 442 aa16.15■□□□□ 0.18
SNRPA1-216ENST00000626000 COL9A3Q14050 684 aaPredicted RBP16.15■□□□□ 0.18
SNRPA1-216ENST00000626000 IQSEC1Q6DN90 963 aa16.15■□□□□ 0.18
SNRPA1-216ENST00000626000 UBE2Q1Q7Z7E8 422 aa16.15■□□□□ 0.18
SNRPA1-216ENST00000626000 RMDN3Q96TC7 470 aa16.15■□□□□ 0.18
SNRPA1-216ENST00000626000 UPF3BQ9BZI7 483 aaKnown RBP16.15■□□□□ 0.18
SNRPA1-216ENST00000626000 XPNPEP3Q9NQH7 507 aa16.15■□□□□ 0.18
SNRPA1-216ENST00000626000 CNTNAP5Q8WYK1 1306 aa16.15■□□□□ 0.18
SNRPA1-216ENST00000626000 MCM3APO60318 1980 aa16.15■□□□□ 0.18
SNRPA1-216ENST00000626000 LCTP09848 1927 aa16.14■□□□□ 0.17
SNRPA1-216ENST00000626000 NKRFO15226 690 aaKnown RBP eCLIP16.14■□□□□ 0.17
SNRPA1-216ENST00000626000 STAM2O75886 525 aa16.14■□□□□ 0.17
SNRPA1-216ENST00000626000 CDKL5O76039 1030 aa16.14■□□□□ 0.17
SNRPA1-216ENST00000626000 CPA1P15085 419 aa16.14■□□□□ 0.17
SNRPA1-216ENST00000626000 SLC35G1Q2M3R5 365 aa16.14■□□□□ 0.17
SNRPA1-216ENST00000626000 CCDC144BQ3MJ40 725 aa16.14■□□□□ 0.17
SNRPA1-216ENST00000626000 C8orf34Q49A92 452 aa16.14■□□□□ 0.17
SNRPA1-216ENST00000626000 PRAMEF19Q5SWL8 479 aa16.14■□□□□ 0.17
SNRPA1-216ENST00000626000 ARHGEF16Q5VV41 709 aa16.14■□□□□ 0.17
SNRPA1-216ENST00000626000 MCTP2Q6DN12 878 aa16.14■□□□□ 0.17
SNRPA1-216ENST00000626000 TRIM22Q8IYM9 498 aa16.14■□□□□ 0.17
SNRPA1-216ENST00000626000 FAM177A1Q8N128 213 aaPredicted RBP16.14■□□□□ 0.17
SNRPA1-216ENST00000626000 RNF26Q9BY78 433 aaPredicted RBP16.14■□□□□ 0.17
SNRPA1-216ENST00000626000 EHMT1Q9H9B1 1298 aa16.14■□□□□ 0.17
SNRPA1-216ENST00000626000 Q9Y3F1 56 aa16.14■□□□□ 0.17
SNRPA1-216ENST00000626000 LRRC37A2A6NM11 1700 aa16.14■□□□□ 0.17
SNRPA1-216ENST00000626000 CPLX1O14810 134 aa16.13■□□□□ 0.17
SNRPA1-216ENST00000626000 PDIA3P30101 505 aaKnown RBP16.13■□□□□ 0.17
SNRPA1-216ENST00000626000 STXBP2Q15833 593 aa16.13■□□□□ 0.17
SNRPA1-216ENST00000626000 XRRA1Q6P2D8 792 aa16.13■□□□□ 0.17
SNRPA1-216ENST00000626000 SMARCC2Q8TAQ2 1214 aa16.13■□□□□ 0.17
SNRPA1-216ENST00000626000 SCFD2Q8WU76 684 aa16.13■□□□□ 0.17
SNRPA1-216ENST00000626000 TSEN34Q9BSV6 310 aaKnown RBP16.13■□□□□ 0.17
SNRPA1-216ENST00000626000 KATNBL1Q9H079 304 aa16.13■□□□□ 0.17
SNRPA1-216ENST00000626000 C11orf49Q9H6J7 331 aa16.13■□□□□ 0.17
SNRPA1-216ENST00000626000 EIF3JO75822 258 aaKnown RBP16.12■□□□□ 0.17
SNRPA1-216ENST00000626000 IFNAR1P17181 557 aa16.12■□□□□ 0.17
SNRPA1-216ENST00000626000 TAL1P17542 331 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms