RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 GDF11O95390 407 aa22.17■■□□□ 1.14
PCDHB11-202ENST00000624887 PDIA5Q14554 519 aa22.17■■□□□ 1.14
PCDHB11-202ENST00000624887 TMEM266Q2M3C6 531 aa22.17■■□□□ 1.14
PCDHB11-202ENST00000624887 FCHSD1Q86WN1 690 aa22.17■■□□□ 1.14
PCDHB11-202ENST00000624887 GIMAP8Q8ND71 665 aaPredicted RBP22.17■■□□□ 1.14
PCDHB11-202ENST00000624887 MAP7D2Q96T17 732 aa22.17■■□□□ 1.14
PCDHB11-202ENST00000624887 C7orf25Q9BPX7 421 aa22.17■■□□□ 1.14
PCDHB11-202ENST00000624887 TRIM9Q9C026 710 aa22.17■■□□□ 1.14
PCDHB11-202ENST00000624887 LRWD1Q9UFC0 647 aa22.17■■□□□ 1.14
PCDHB11-202ENST00000624887 F5H6K3 240 aa22.16■■□□□ 1.14
PCDHB11-202ENST00000624887 ARHGAP6O43182 974 aa22.16■■□□□ 1.14
PCDHB11-202ENST00000624887 RAD21O60216 631 aa22.16■■□□□ 1.14
PCDHB11-202ENST00000624887 KLRC3Q07444 240 aa22.16■■□□□ 1.14
PCDHB11-202ENST00000624887 RSBN1LQ6PCB5 846 aaPredicted RBP22.16■■□□□ 1.14
PCDHB11-202ENST00000624887 RAB34Q9BZG1 259 aa22.16■■□□□ 1.14
PCDHB11-202ENST00000624887 MYH7BA7E2Y1 1941 aa22.16■■□□□ 1.14
PCDHB11-202ENST00000624887 H7C1D1 291 aa22.16■■□□□ 1.14
PCDHB11-202ENST00000624887 COBLO75128 1261 aa22.16■■□□□ 1.14
PCDHB11-202ENST00000624887 AMPD3Q01432 767 aa22.16■■□□□ 1.14
PCDHB11-202ENST00000624887 GMCL1Q96IK5 515 aa22.16■■□□□ 1.14
PCDHB11-202ENST00000624887 BAG1Q99933 345 aaPredicted RBP22.16■■□□□ 1.14
PCDHB11-202ENST00000624887 MAPK8IP1Q9UQF2 711 aa22.16■■□□□ 1.14
PCDHB11-202ENST00000624887 SPDYE2BA6NHP3 402 aa22.15■■□□□ 1.14
PCDHB11-202ENST00000624887 STX10O60499 249 aa22.15■■□□□ 1.14
PCDHB11-202ENST00000624887 SPDYE6P0CI01 402 aa22.15■■□□□ 1.14
PCDHB11-202ENST00000624887 GCFC2P16383 781 aaKnown RBP22.15■■□□□ 1.14
PCDHB11-202ENST00000624887 STIM1Q13586 685 aa22.15■■□□□ 1.14
PCDHB11-202ENST00000624887 KRT31Q15323 416 aa22.15■■□□□ 1.14
PCDHB11-202ENST00000624887 CDC37Q16543 378 aaPredicted RBP22.15■■□□□ 1.14
PCDHB11-202ENST00000624887 RBM26Q5T8P6 1007 aaKnown RBP22.15■■□□□ 1.14
PCDHB11-202ENST00000624887 ZNF592Q92610 1267 aa22.15■■□□□ 1.14
PCDHB11-202ENST00000624887 CSRNP1Q96S65 589 aa22.15■■□□□ 1.14
PCDHB11-202ENST00000624887 PCDHA1Q9Y5I3 950 aa22.15■■□□□ 1.14
PCDHB11-202ENST00000624887 VIL1P09327 827 aaKnown RBP22.14■■□□□ 1.14
PCDHB11-202ENST00000624887 ADKP55263 362 aaKnown RBP22.14■■□□□ 1.14
PCDHB11-202ENST00000624887 TCP11X2Q5H9J9 407 aa22.14■■□□□ 1.14
PCDHB11-202ENST00000624887 CCDC47Q96A33 483 aaKnown RBP22.14■■□□□ 1.14
PCDHB11-202ENST00000624887 PKNOX2Q96KN3 472 aa22.14■■□□□ 1.14
PCDHB11-202ENST00000624887 NAP1L4Q99733 375 aaKnown RBP22.14■■□□□ 1.14
PCDHB11-202ENST00000624887 GTPBP4Q9BZE4 634 aaKnown RBP22.14■■□□□ 1.14
PCDHB11-202ENST00000624887 TMOD2Q9NZR1 351 aa22.14■■□□□ 1.14
PCDHB11-202ENST00000624887 STK17AQ9UEE5 414 aa22.14■■□□□ 1.14
PCDHB11-202ENST00000624887 DDX25Q9UHL0 483 aaKnown RBP22.14■■□□□ 1.14
PCDHB11-202ENST00000624887 HERC5Q9UII4 1024 aaKnown RBP22.14■■□□□ 1.14
PCDHB11-202ENST00000624887 CTIFO43310 598 aaKnown RBP22.14■■□□□ 1.13
PCDHB11-202ENST00000624887 GH2P01242 217 aa22.14■■□□□ 1.13
PCDHB11-202ENST00000624887 TUBB4AP04350 444 aa22.14■■□□□ 1.13
PCDHB11-202ENST00000624887 JAG1P78504 1218 aa22.14■■□□□ 1.13
PCDHB11-202ENST00000624887 GRB10Q13322 594 aa22.14■■□□□ 1.13
PCDHB11-202ENST00000624887 ANKRD20A12PQ8NF67 263 aa22.14■■□□□ 1.13
PCDHB11-202ENST00000624887 GMLQ99445 158 aa22.14■■□□□ 1.13
PCDHB11-202ENST00000624887 PIM2Q9P1W9 311 aa22.14■■□□□ 1.13
PCDHB11-202ENST00000624887 PSMA7O14818 248 aa22.13■■□□□ 1.13
PCDHB11-202ENST00000624887 NDUFB10O96000 172 aa22.13■■□□□ 1.13
PCDHB11-202ENST00000624887 KIF18AQ8NI77 898 aa22.13■■□□□ 1.13
PCDHB11-202ENST00000624887 SYNPO2Q9UMS6 1093 aa22.13■■□□□ 1.13
PCDHB11-202ENST00000624887 ITIH6Q6UXX5 1313 aa22.13■■□□□ 1.13
PCDHB11-202ENST00000624887 KCNJ18B7U540 433 aa22.12■■□□□ 1.13
PCDHB11-202ENST00000624887 AKR1B15C9JRZ8 316 aaPredicted RBP22.12■■□□□ 1.13
PCDHB11-202ENST00000624887 PSMD14O00487 310 aa22.12■■□□□ 1.13
PCDHB11-202ENST00000624887 KCNJ12Q14500 433 aa22.12■■□□□ 1.13
PCDHB11-202ENST00000624887 RRP1BQ14684 758 aaKnown RBP22.12■■□□□ 1.13
PCDHB11-202ENST00000624887 LARGE2Q8N3Y3 721 aa22.12■■□□□ 1.13
PCDHB11-202ENST00000624887 PNMA5Q96PV4 448 aa22.12■■□□□ 1.13
PCDHB11-202ENST00000624887 PANX2Q96RD6 677 aa22.12■■□□□ 1.13
PCDHB11-202ENST00000624887 BLOC1S4Q9NUP1 217 aa22.12■■□□□ 1.13
PCDHB11-202ENST00000624887 HDAC9Q9UKV0 1011 aa22.12■■□□□ 1.13
PCDHB11-202ENST00000624887 RAD17O75943 681 aa22.12■■□□□ 1.13
PCDHB11-202ENST00000624887 CCT6AP40227 531 aaKnown RBP22.12■■□□□ 1.13
PCDHB11-202ENST00000624887 COPB1P53618 953 aaKnown RBP22.12■■□□□ 1.13
PCDHB11-202ENST00000624887 ASIC1P78348 528 aa22.12■■□□□ 1.13
PCDHB11-202ENST00000624887 RBM10P98175 930 aaKnown RBP22.12■■□□□ 1.13
PCDHB11-202ENST00000624887 SV2BQ7L1I2 683 aa22.12■■□□□ 1.13
PCDHB11-202ENST00000624887 HAS1Q92839 578 aa22.12■■□□□ 1.13
PCDHB11-202ENST00000624887 DHTKD1Q96HY7 919 aaPredicted RBP22.12■■□□□ 1.13
PCDHB11-202ENST00000624887 ZMYND15Q9H091 742 aa22.12■■□□□ 1.13
PCDHB11-202ENST00000624887 EXOC1Q9NV70 894 aa22.12■■□□□ 1.13
PCDHB11-202ENST00000624887 POTEMA6NI47 508 aa22.11■■□□□ 1.13
PCDHB11-202ENST00000624887 USP17L15C9J2P7 530 aa22.11■■□□□ 1.13
PCDHB11-202ENST00000624887 USP17L13C9JLJ4 530 aa22.11■■□□□ 1.13
PCDHB11-202ENST00000624887 USP17L11C9JVI0 530 aa22.11■■□□□ 1.13
PCDHB11-202ENST00000624887 USP17L18D6R9N7 530 aa22.11■■□□□ 1.13
PCDHB11-202ENST00000624887 USP17L22D6RA61 530 aa22.11■■□□□ 1.13
PCDHB11-202ENST00000624887 USP17L17D6RBQ6 530 aa22.11■■□□□ 1.13
PCDHB11-202ENST00000624887 USP17L19D6RCP7 530 aa22.11■■□□□ 1.13
PCDHB11-202ENST00000624887 USP17L20D6RJB6 530 aa22.11■■□□□ 1.13
PCDHB11-202ENST00000624887 N4BP3O15049 544 aa22.11■■□□□ 1.13
PCDHB11-202ENST00000624887 PMS1P54277 932 aaKnown RBP22.11■■□□□ 1.13
PCDHB11-202ENST00000624887 PDE4DQ08499 809 aa22.11■■□□□ 1.13
PCDHB11-202ENST00000624887 USP17L24Q0WX57 530 aa22.11■■□□□ 1.13
PCDHB11-202ENST00000624887 KRT79Q5XKE5 535 aa22.11■■□□□ 1.13
PCDHB11-202ENST00000624887 USP17L6PQ6QN14 398 aa22.11■■□□□ 1.13
PCDHB11-202ENST00000624887 PPFIBP1Q86W92 1011 aa22.11■■□□□ 1.13
PCDHB11-202ENST00000624887 IRF2BP1Q8IU81 584 aa22.11■■□□□ 1.13
PCDHB11-202ENST00000624887 TSC1Q92574 1164 aa22.11■■□□□ 1.13
PCDHB11-202ENST00000624887 SGIP1Q9BQI5 828 aa22.11■■□□□ 1.13
PCDHB11-202ENST00000624887 TRIM49BA6NDI0 452 aa22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 TCP10L2B9ZVM9 353 aa22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 PPP1R2P41236 205 aa22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 USP11P51784 963 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms