RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 BICDL1Q6ZP65 573 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 TMEM165Q9HC07 324 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 XDHP47989 1333 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 CNTNAP5Q8WYK1 1306 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 MYH2Q9UKX2 1941 aa13.83□□□□□ -0.2
LITAF-221ENST00000622633 SPDYE3A6NKU9 549 aa13.83□□□□□ -0.2
LITAF-221ENST00000622633 PPP1R12BO60237 982 aaPredicted RBP13.83□□□□□ -0.2
LITAF-221ENST00000622633 DDAH1O94760 285 aa13.83□□□□□ -0.2
LITAF-221ENST00000622633 CASP14P31944 242 aa13.83□□□□□ -0.2
LITAF-221ENST00000622633 MARCH10Q8NA82 808 aaPredicted RBP13.83□□□□□ -0.2
LITAF-221ENST00000622633 BCAS4Q8TDM0 211 aa13.83□□□□□ -0.2
LITAF-221ENST00000622633 CELF1Q92879 486 aaKnown RBP13.83□□□□□ -0.2
LITAF-221ENST00000622633 EPAS1Q99814 870 aa13.83□□□□□ -0.2
LITAF-221ENST00000622633 SLC39A2Q9NP94 309 aa13.83□□□□□ -0.2
LITAF-221ENST00000622633 BATF3Q9NR55 127 aa13.83□□□□□ -0.2
LITAF-221ENST00000622633 MYO6Q9UM54 1294 aa13.83□□□□□ -0.2
LITAF-221ENST00000622633 CICQ96RK0 1608 aaPredicted RBP13.83□□□□□ -0.2
LITAF-221ENST00000622633 TPP2P29144 1249 aaPredicted RBP13.83□□□□□ -0.2
LITAF-221ENST00000622633 MECOMQ03112 1051 aa13.83□□□□□ -0.2
LITAF-221ENST00000622633 SLC4A8Q2Y0W8 1093 aa13.83□□□□□ -0.2
LITAF-221ENST00000622633 CCDC178Q5BJE1 867 aa13.83□□□□□ -0.2
LITAF-221ENST00000622633 RRAGBQ5VZM2 374 aa13.83□□□□□ -0.2
LITAF-221ENST00000622633 SMIM5Q71RC9 77 aa13.83□□□□□ -0.2
LITAF-221ENST00000622633 MSANTD4Q8NCY6 345 aa13.83□□□□□ -0.2
LITAF-221ENST00000622633 MAGEC3Q8TD91 643 aa13.83□□□□□ -0.2
LITAF-221ENST00000622633 NSUN4Q96CB9 384 aaKnown RBP13.83□□□□□ -0.2
LITAF-221ENST00000622633 MTRQ99707 1265 aa13.83□□□□□ -0.2
LITAF-221ENST00000622633 TSPYL2Q9H2G4 693 aaPredicted RBP13.83□□□□□ -0.2
LITAF-221ENST00000622633 DNAJC5Q9H3Z4 198 aa13.83□□□□□ -0.2
LITAF-221ENST00000622633 ZSWIM4Q9H7M6 989 aa13.83□□□□□ -0.2
LITAF-221ENST00000622633 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.83□□□□□ -0.2
LITAF-221ENST00000622633 BAZ2BQ9UIF8 2168 aaKnown RBP13.82□□□□□ -0.2
LITAF-221ENST00000622633 ERLIN1O75477 346 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 FESP07332 822 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 SCG2P13521 617 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 PAX3P23760 479 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 GBP2P32456 591 aaPredicted RBP13.82□□□□□ -0.2
LITAF-221ENST00000622633 FXR1P51114 621 aaKnown RBP eCLIP13.82□□□□□ -0.2
LITAF-221ENST00000622633 CTAGE1Q96RT6 745 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 DCP1AQ9NPI6 582 aaPredicted RBP13.82□□□□□ -0.2
LITAF-221ENST00000622633 TFCP2L1Q9NZI6 479 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 ZNF652Q9Y2D9 606 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 PLCH1Q4KWH8 1693 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 MFAP3LO75121 409 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 GYPCP04921 128 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 CDC25AP30304 524 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 ZBED6P86452 979 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 KRT31Q15323 416 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 SF3B3Q15393 1217 aaKnown RBP13.82□□□□□ -0.2
LITAF-221ENST00000622633 CCDC40Q4G0X9 1142 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 MIS18BP1Q6P0N0 1132 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 FBXO33Q7Z6M2 555 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 VPS16Q9H269 839 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 RANBP17Q9H2T7 1088 aaKnown RBP13.82□□□□□ -0.2
LITAF-221ENST00000622633 CENPHQ9H3R5 247 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 MAPK8IP1Q9UQF2 711 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 JAG2Q9Y219 1238 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 SAMM50Q9Y512 469 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 PCDHGC5Q9Y5F6 944 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 DUOX1Q9NRD9 1551 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 MYH6P13533 1939 aa13.82□□□□□ -0.2
LITAF-221ENST00000622633 BAZ2AQ9UIF9 1905 aaKnown RBP13.81□□□□□ -0.2
LITAF-221ENST00000622633 MEFVO15553 781 aaPredicted RBP13.81□□□□□ -0.2
LITAF-221ENST00000622633 AHCYL1O43865 530 aa13.81□□□□□ -0.2
LITAF-221ENST00000622633 ADAMTS2O95450 1211 aa13.81□□□□□ -0.2
LITAF-221ENST00000622633 MYL1P05976 194 aa13.81□□□□□ -0.2
LITAF-221ENST00000622633 PCP11498 1178 aaKnown RBP13.81□□□□□ -0.2
LITAF-221ENST00000622633 AARSP49588 968 aaKnown RBP eCLIP13.81□□□□□ -0.2
LITAF-221ENST00000622633 KCNQ4P56696 695 aa13.81□□□□□ -0.2
LITAF-221ENST00000622633 CCDC181Q5TID7 509 aa13.81□□□□□ -0.2
LITAF-221ENST00000622633 CWF19L1Q69YN2 538 aaKnown RBP13.81□□□□□ -0.2
LITAF-221ENST00000622633 CAPRIN2Q6IMN6 1127 aaKnown RBP13.81□□□□□ -0.2
LITAF-221ENST00000622633 PDXDC2PQ6P474 469 aa13.81□□□□□ -0.2
LITAF-221ENST00000622633 LZTS2Q9BRK4 669 aa13.81□□□□□ -0.2
LITAF-221ENST00000622633 RABEP2Q9H5N1 569 aa13.81□□□□□ -0.2
LITAF-221ENST00000622633 DOT1LQ8TEK3 1739 aa13.81□□□□□ -0.2
LITAF-221ENST00000622633 RNF225M0QZC1 329 aaPredicted RBP13.81□□□□□ -0.2
LITAF-221ENST00000622633 SEMA3EO15041 775 aa13.81□□□□□ -0.2
LITAF-221ENST00000622633 N4BP3O15049 544 aa13.81□□□□□ -0.2
LITAF-221ENST00000622633 KCNQ2O43526 872 aa13.81□□□□□ -0.2
LITAF-221ENST00000622633 ORC4O43929 436 aa13.81□□□□□ -0.2
LITAF-221ENST00000622633 KCNA4P22459 653 aa13.81□□□□□ -0.2
LITAF-221ENST00000622633 RASA3Q14644 834 aa13.81□□□□□ -0.2
LITAF-221ENST00000622633 E2F5Q15329 346 aa13.81□□□□□ -0.2
LITAF-221ENST00000622633 SNCBQ16143 134 aa13.81□□□□□ -0.2
LITAF-221ENST00000622633 ZNF569Q5MCW4 686 aa13.81□□□□□ -0.2
LITAF-221ENST00000622633 NAA15Q9BXJ9 866 aaKnown RBP13.81□□□□□ -0.2
LITAF-221ENST00000622633 TAB2Q9NYJ8 693 aa13.81□□□□□ -0.2
LITAF-221ENST00000622633 RGL1Q9NZL6 768 aa13.81□□□□□ -0.2
LITAF-221ENST00000622633 CACNA1SQ13698 1873 aa13.8□□□□□ -0.2
LITAF-221ENST00000622633 KIF5CO60282 957 aa13.8□□□□□ -0.2
LITAF-221ENST00000622633 PFKFB3Q16875 520 aaPredicted RBP13.8□□□□□ -0.2
LITAF-221ENST00000622633 SMARCC1Q92922 1105 aaPredicted RBP13.8□□□□□ -0.2
LITAF-221ENST00000622633 CRNKL1Q9BZJ0 848 aaKnown RBP13.8□□□□□ -0.2
LITAF-221ENST00000622633 SLC40A1Q9NP59 571 aa13.8□□□□□ -0.2
LITAF-221ENST00000622633 PUF60Q9UHX1 559 aaKnown RBP13.8□□□□□ -0.2
LITAF-221ENST00000622633 MYH14Q7Z406 1995 aaKnown RBP13.8□□□□□ -0.2
LITAF-221ENST00000622633 SHTN1A0MZ66 631 aa13.8□□□□□ -0.2
LITAF-221ENST00000622633 TSPY2A6NKD2 308 aa13.8□□□□□ -0.2
LITAF-221ENST00000622633 GTPBP6O43824 516 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms