RNA–Protein interactions for RNA: ENST00000619810.4

SHISA5-220, Transcript of shisa family member 5, humanhuman

TSL 2 BASIC

Gene SHISA5, Length 2,385 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-220ENST00000619810 TUBBP07437 444 aa20.88■□□□□ 0.93
SHISA5-220ENST00000619810 KRT83P78385 493 aa20.88■□□□□ 0.93
SHISA5-220ENST00000619810 TBC1D8BQ0IIM8 1120 aa20.88■□□□□ 0.93
SHISA5-220ENST00000619810 SMC1AQ14683 1233 aaKnown RBP20.88■□□□□ 0.93
SHISA5-220ENST00000619810 PODXL2Q9NZ53 605 aa20.88■□□□□ 0.93
SHISA5-220ENST00000619810 PLIN4Q96Q06 1357 aa20.87■□□□□ 0.93
SHISA5-220ENST00000619810 FIGNQ5HY92 759 aa20.87■□□□□ 0.93
SHISA5-220ENST00000619810 ZSCAN29Q8IWY8 852 aaPredicted RBP20.87■□□□□ 0.93
SHISA5-220ENST00000619810 CNOT6LQ96LI5 555 aaKnown RBP20.87■□□□□ 0.93
SHISA5-220ENST00000619810 MTMR9Q96QG7 549 aa20.87■□□□□ 0.93
SHISA5-220ENST00000619810 VAT1LQ9HCJ6 419 aa20.87■□□□□ 0.93
SHISA5-220ENST00000619810 THSD7AQ9UPZ6 1657 aa20.87■□□□□ 0.93
SHISA5-220ENST00000619810 BIN2Q9UBW5 565 aaPredicted RBP20.87■□□□□ 0.93
SHISA5-220ENST00000619810 STK17AQ9UEE5 414 aa20.87■□□□□ 0.93
SHISA5-220ENST00000619810 GUCA1BQ9UMX6 200 aa20.87■□□□□ 0.93
SHISA5-220ENST00000619810 USP17L5A8MUK1 530 aa20.86■□□□□ 0.93
SHISA5-220ENST00000619810 BBOX1O75936 387 aa20.86■□□□□ 0.93
SHISA5-220ENST00000619810 PDHBP11177 359 aa20.86■□□□□ 0.93
SHISA5-220ENST00000619810 TRIM21P19474 475 aaKnown RBP20.86■□□□□ 0.93
SHISA5-220ENST00000619810 HERVK_113P62684 666 aa20.86■□□□□ 0.93
SHISA5-220ENST00000619810 ZBED6P86452 979 aa20.86■□□□□ 0.93
SHISA5-220ENST00000619810 FAM182BQ5T319 152 aa20.86■□□□□ 0.93
SHISA5-220ENST00000619810 MSL3Q8N5Y2 521 aaKnown RBP20.86■□□□□ 0.93
SHISA5-220ENST00000619810 IQCDQ96DY2 449 aa20.86■□□□□ 0.93
SHISA5-220ENST00000619810 RBM17Q96I25 401 aaKnown RBP20.86■□□□□ 0.93
SHISA5-220ENST00000619810 ERGIC2Q96RQ1 377 aa20.86■□□□□ 0.93
SHISA5-220ENST00000619810 RASSF10A6NK89 507 aa20.86■□□□□ 0.93
SHISA5-220ENST00000619810 ERLIN1O75477 346 aa20.86■□□□□ 0.93
SHISA5-220ENST00000619810 FCER1AP12319 257 aa20.86■□□□□ 0.93
SHISA5-220ENST00000619810 CYP2C19P33261 490 aa20.86■□□□□ 0.93
SHISA5-220ENST00000619810 FXR2P51116 673 aaKnown RBP eCLIP20.86■□□□□ 0.93
SHISA5-220ENST00000619810 BEND6Q5SZJ8 279 aaPredicted RBP20.86■□□□□ 0.93
SHISA5-220ENST00000619810 POTEDQ86YR6 584 aa20.86■□□□□ 0.93
SHISA5-220ENST00000619810 CCDC170Q8IYT3 715 aa20.86■□□□□ 0.93
SHISA5-220ENST00000619810 AGPAT5Q9NUQ2 364 aa20.86■□□□□ 0.93
SHISA5-220ENST00000619810 ZNHIT6Q9NWK9 470 aaKnown RBP20.86■□□□□ 0.93
SHISA5-220ENST00000619810 A0A1W2PQJ5 194 aa20.85■□□□□ 0.93
SHISA5-220ENST00000619810 CYLC1P35663 651 aaPredicted RBP20.85■□□□□ 0.93
SHISA5-220ENST00000619810 CDK17Q00537 523 aa20.85■□□□□ 0.93
SHISA5-220ENST00000619810 ASPRV1Q53RT3 343 aa20.85■□□□□ 0.93
SHISA5-220ENST00000619810 MIIPQ5JXC2 388 aa20.85■□□□□ 0.93
SHISA5-220ENST00000619810 SV2BQ7L1I2 683 aa20.85■□□□□ 0.93
SHISA5-220ENST00000619810 TRAPPC11Q7Z392 1133 aa20.85■□□□□ 0.93
SHISA5-220ENST00000619810 PNKPQ96T60 521 aa20.85■□□□□ 0.93
SHISA5-220ENST00000619810 UBA5Q9GZZ9 404 aa20.85■□□□□ 0.93
SHISA5-220ENST00000619810 MTMR4Q9NYA4 1195 aa20.85■□□□□ 0.93
SHISA5-220ENST00000619810 PVALEFA0A1B0GWK0 134 aa20.85■□□□□ 0.93
SHISA5-220ENST00000619810 OAS2P29728 719 aaKnown RBP20.85■□□□□ 0.93
SHISA5-220ENST00000619810 HOXA7P31268 230 aaPredicted RBP20.85■□□□□ 0.93
SHISA5-220ENST00000619810 ST5P78524 1137 aa20.85■□□□□ 0.93
SHISA5-220ENST00000619810 CENPPQ6IPU0 288 aa20.85■□□□□ 0.93
SHISA5-220ENST00000619810 KIAA0895Q8NCT3 520 aa20.85■□□□□ 0.93
SHISA5-220ENST00000619810 EHBP1Q8NDI1 1231 aa20.85■□□□□ 0.93
SHISA5-220ENST00000619810 NOC4LQ9BVI4 516 aaKnown RBP20.85■□□□□ 0.93
SHISA5-220ENST00000619810 SPATA31A6Q5VVP1 1343 aa20.84■□□□□ 0.93
SHISA5-220ENST00000619810 SNHG28P0DPA3 235 aa20.84■□□□□ 0.93
SHISA5-220ENST00000619810 TXKP42681 527 aa20.84■□□□□ 0.93
SHISA5-220ENST00000619810 MTIF2P46199 727 aaKnown RBP20.84■□□□□ 0.93
SHISA5-220ENST00000619810 GRB10Q13322 594 aa20.84■□□□□ 0.93
SHISA5-220ENST00000619810 TAF3Q5VWG9 929 aa20.84■□□□□ 0.93
SHISA5-220ENST00000619810 TBC1D16Q8TBP0 767 aa20.84■□□□□ 0.93
SHISA5-220ENST00000619810 BLOC1S4Q9NUP1 217 aa20.84■□□□□ 0.93
SHISA5-220ENST00000619810 TRIM10Q9UDY6 481 aa20.84■□□□□ 0.93
SHISA5-220ENST00000619810 LRWD1Q9UFC0 647 aa20.84■□□□□ 0.93
SHISA5-220ENST00000619810 EIF3CLB5ME19 914 aaKnown RBP20.83■□□□□ 0.93
SHISA5-220ENST00000619810 KRT86O43790 486 aa20.83■□□□□ 0.93
SHISA5-220ENST00000619810 GABPAQ06546 454 aa20.83■□□□□ 0.93
SHISA5-220ENST00000619810 PDIA5Q14554 519 aa20.83■□□□□ 0.93
SHISA5-220ENST00000619810 CALCRLQ16602 461 aa20.83■□□□□ 0.93
SHISA5-220ENST00000619810 CCDC122Q5T0U0 273 aa20.83■□□□□ 0.93
SHISA5-220ENST00000619810 EIF3CQ99613 913 aaKnown RBP20.83■□□□□ 0.93
SHISA5-220ENST00000619810 TMEM260Q9NX78 707 aa20.83■□□□□ 0.93
SHISA5-220ENST00000619810 POLLQ9UGP5 575 aa20.83■□□□□ 0.93
SHISA5-220ENST00000619810 POLR3GO15318 223 aaPredicted RBP20.83■□□□□ 0.93
SHISA5-220ENST00000619810 TFRCP02786 760 aaKnown RBP20.83■□□□□ 0.93
SHISA5-220ENST00000619810 FKBP15Q5T1M5 1219 aa20.83■□□□□ 0.93
SHISA5-220ENST00000619810 UNC13DQ70J99 1090 aa20.83■□□□□ 0.93
SHISA5-220ENST00000619810 HDXQ7Z353 690 aa20.83■□□□□ 0.93
SHISA5-220ENST00000619810 NHEJ1Q9H9Q4 299 aaPredicted RBP20.83■□□□□ 0.93
SHISA5-220ENST00000619810 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.83■□□□□ 0.93
SHISA5-220ENST00000619810 L1RE1Q9UN81 338 aa20.83■□□□□ 0.93
SHISA5-220ENST00000619810 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.82■□□□□ 0.92
SHISA5-220ENST00000619810 CCDC66A2RUB6 948 aa20.82■□□□□ 0.92
SHISA5-220ENST00000619810 SERPINB2P05120 415 aa20.82■□□□□ 0.92
SHISA5-220ENST00000619810 HOXA10P31260 410 aaPredicted RBP20.82■□□□□ 0.92
SHISA5-220ENST00000619810 ADCY7P51828 1080 aa20.82■□□□□ 0.92
SHISA5-220ENST00000619810 TMEM266Q2M3C6 531 aa20.82■□□□□ 0.92
SHISA5-220ENST00000619810 PAPD7Q5XG87 772 aaKnown RBP20.82■□□□□ 0.92
SHISA5-220ENST00000619810 RAB34Q9BZG1 259 aa20.82■□□□□ 0.92
SHISA5-220ENST00000619810 GBP3Q9H0R5 595 aa20.82■□□□□ 0.92
SHISA5-220ENST00000619810 SEMA6BQ9H3T3 888 aa20.82■□□□□ 0.92
SHISA5-220ENST00000619810 USP21Q9UK80 565 aa20.82■□□□□ 0.92
SHISA5-220ENST00000619810 IPO7O95373 1038 aaKnown RBP20.82■□□□□ 0.92
SHISA5-220ENST00000619810 KIAA1328Q86T90 577 aa20.82■□□□□ 0.92
SHISA5-220ENST00000619810 LARP4BQ92615 738 aaKnown RBP20.82■□□□□ 0.92
SHISA5-220ENST00000619810 EEF2KMTQ96G04 330 aa20.82■□□□□ 0.92
SHISA5-220ENST00000619810 PNMA5Q96PV4 448 aa20.82■□□□□ 0.92
SHISA5-220ENST00000619810 DAGLAQ9Y4D2 1042 aa20.82■□□□□ 0.92
SHISA5-220ENST00000619810 IGKV6D-41A0A0C4DH26 115 aa20.81■□□□□ 0.92
SHISA5-220ENST00000619810 EDIL3O43854 480 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms