RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 CASP7P55210 303 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 TUBB8Q3ZCM7 444 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 FAM133BQ5BKY9 247 aaKnown RBP7.38□□□□□ -1.23
LMO3-235ENST00000616247 DTHD1Q6ZMT9 781 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 ADAT2Q7Z6V5 191 aaKnown RBP7.38□□□□□ -1.23
LMO3-235ENST00000616247 SPATS2Q86XZ4 545 aaKnown RBP7.38□□□□□ -1.23
LMO3-235ENST00000616247 SPATA20Q8TB22 786 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 ATP6V1G3Q96LB4 118 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 UIMC1Q96RL1 719 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 AP1M1Q9BXS5 423 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 DPH5Q9H2P9 285 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 GOLPH3Q9H4A6 298 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 GREM2Q9H772 168 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 VCPKMTQ9H867 229 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 EPB41L4AQ9HCS5 686 aaPredicted RBP7.38□□□□□ -1.23
LMO3-235ENST00000616247 SLC39A2Q9NP94 309 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 TPX2Q9ULW0 747 aaKnown RBP7.38□□□□□ -1.23
LMO3-235ENST00000616247 KDM4FA0A1W2PPD8 638 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 GMNCA6NCL1 334 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 KCNK3O14649 394 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 KIF4AO95239 1232 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 VIMP08670 466 aaKnown RBP7.38□□□□□ -1.23
LMO3-235ENST00000616247 CYP7A1P22680 504 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 IFNAR2P48551 515 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 SMTNP53814 917 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 SATB1Q01826 763 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 MKRN4PQ13434 485 aaPredicted RBP7.38□□□□□ -1.23
LMO3-235ENST00000616247 DYMQ7RTS9 669 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 IRF2BP1Q8IU81 584 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 TMTC2Q8N394 836 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 LCORLQ8N3X6 602 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 MMGT1Q8N4V1 131 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 ESR2Q92731 530 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 GPKOWQ92917 476 aaPredicted RBP eCLIP7.38□□□□□ -1.23
LMO3-235ENST00000616247 ZHX3Q9H4I2 956 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 KANSL2Q9H9L4 492 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 DDX20Q9UHI6 824 aaKnown RBP7.38□□□□□ -1.23
LMO3-235ENST00000616247 ENO4A6NNW6 628 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 SLC1A4P43007 532 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 GKAP1Q5VSY0 366 aaPredicted RBP7.37□□□□□ -1.23
LMO3-235ENST00000616247 FMNL3Q8IVF7 1028 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 CCDC170Q8IYT3 715 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 MDM1Q8TC05 714 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 SPDL1Q96EA4 605 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 DNAJC7Q99615 494 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 MTRQ99707 1265 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 NUP58Q9BVL2 599 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 RNF41Q9H4P4 317 aaPredicted RBP7.37□□□□□ -1.23
LMO3-235ENST00000616247 TRMT112Q9UI30 125 aaKnown RBP7.37□□□□□ -1.23
LMO3-235ENST00000616247 STK38LQ9Y2H1 464 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 SOS2Q07890 1332 aaPredicted RBP7.37□□□□□ -1.23
LMO3-235ENST00000616247 CHD2O14647 1828 aaKnown RBP7.37□□□□□ -1.23
LMO3-235ENST00000616247 ZNF263O14978 683 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 FAM107AO95990 144 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 GCFC2P16383 781 aaKnown RBP7.37□□□□□ -1.23
LMO3-235ENST00000616247 EEF1GP26641 437 aaKnown RBP7.37□□□□□ -1.23
LMO3-235ENST00000616247 EPS15P42566 896 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 PREPLQ4J6C6 727 aaPredicted RBP7.37□□□□□ -1.23
LMO3-235ENST00000616247 FAM47AQ5JRC9 791 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 KIF6Q6ZMV9 814 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 DNAAF5Q86Y56 855 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 TEX11Q8IYF3 940 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 HVCN1Q96D96 273 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 PTPRUQ92729 1446 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 LRRC10BA6NIK2 292 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 LRRC53A6NM62 1247 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 MARCH6O60337 910 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 PALMO75781 387 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 MYBL1P10243 752 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 FCER1AP12319 257 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 MAGOHP61326 146 aaKnown RBP7.37□□□□□ -1.23
LMO3-235ENST00000616247 SKOR1P84550 965 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 RAPGEF1Q13905 1077 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 UBE3CQ15386 1083 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 QPCTQ16769 361 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 ANKRD40Q6AI12 368 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 KDM7AQ6ZMT4 941 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 SH3RF1Q7Z6J0 888 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 KSR1Q8IVT5 923 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 FAM114A1Q8IWE2 563 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 ELOA2Q8IYF1 753 aaPredicted RBP7.37□□□□□ -1.23
LMO3-235ENST00000616247 FUKQ8N0W3 1084 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 ADSSL1Q8N142 457 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 CCDC155Q8N6L0 562 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 CASKIN2Q8WXE0 1202 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 MAGOHBQ96A72 148 aaKnown RBP7.37□□□□□ -1.23
LMO3-235ENST00000616247 SGSM3Q96HU1 749 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 SH2D4AQ9H788 454 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 MCM8Q9UJA3 840 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 L3MBTL1Q9Y468 752 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 CD2APQ9Y5K6 639 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 STK36Q9NRP7 1315 aa7.37□□□□□ -1.23
LMO3-235ENST00000616247 DNM1LO00429 736 aa7.36□□□□□ -1.23
LMO3-235ENST00000616247 CTNND1O60716 968 aaKnown RBP7.36□□□□□ -1.23
LMO3-235ENST00000616247 CIAO1O76071 339 aa7.36□□□□□ -1.23
LMO3-235ENST00000616247 VEGFAP15692 232 aaPredicted RBP7.36□□□□□ -1.23
LMO3-235ENST00000616247 TNNC1P63316 161 aa7.36□□□□□ -1.23
LMO3-235ENST00000616247 KIAA0753Q2KHM9 967 aa7.36□□□□□ -1.23
LMO3-235ENST00000616247 SPRED3Q2MJR0 410 aa7.36□□□□□ -1.23
LMO3-235ENST00000616247 ACCSLQ4AC99 568 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms