RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 TXKP42681 527 aa19.28■□□□□ 0.68
NEK3-206ENST00000611833 GABPAQ06546 454 aa19.28■□□□□ 0.68
NEK3-206ENST00000611833 STK4Q13043 487 aa19.28■□□□□ 0.68
NEK3-206ENST00000611833 FAM114A1Q8IWE2 563 aa19.28■□□□□ 0.68
NEK3-206ENST00000611833 ESYT2A0FGR8 921 aa19.27■□□□□ 0.68
NEK3-206ENST00000611833 KLRG2A4D1S0 409 aaPredicted RBP19.27■□□□□ 0.68
NEK3-206ENST00000611833 SRGNP10124 158 aa19.27■□□□□ 0.68
NEK3-206ENST00000611833 TRIM21P19474 475 aaKnown RBP19.27■□□□□ 0.68
NEK3-206ENST00000611833 TUBB4BP68371 445 aa19.27■□□□□ 0.68
NEK3-206ENST00000611833 BRD3Q15059 726 aa19.27■□□□□ 0.68
NEK3-206ENST00000611833 ANKRD40Q6AI12 368 aa19.27■□□□□ 0.68
NEK3-206ENST00000611833 POTEDQ86YR6 584 aa19.27■□□□□ 0.68
NEK3-206ENST00000611833 LRRC47Q8N1G4 583 aaKnown RBP19.27■□□□□ 0.68
NEK3-206ENST00000611833 PCMTD1Q96MG8 357 aaPredicted RBP19.27■□□□□ 0.68
NEK3-206ENST00000611833 MMTAG2Q9BU76 263 aaKnown RBP19.27■□□□□ 0.68
NEK3-206ENST00000611833 CCDC151A5D8V7 595 aa19.26■□□□□ 0.67
NEK3-206ENST00000611833 F8W031 263 aaPredicted RBP19.26■□□□□ 0.67
NEK3-206ENST00000611833 POTEB2H3BUK9 544 aa19.26■□□□□ 0.67
NEK3-206ENST00000611833 AKR1B1P15121 316 aa19.26■□□□□ 0.67
NEK3-206ENST00000611833 PPP1R2P41236 205 aa19.26■□□□□ 0.67
NEK3-206ENST00000611833 MTIF2P46199 727 aaKnown RBP19.26■□□□□ 0.67
NEK3-206ENST00000611833 TBC1D8BQ0IIM8 1120 aa19.26■□□□□ 0.67
NEK3-206ENST00000611833 CLEC10AQ8IUN9 316 aa19.26■□□□□ 0.67
NEK3-206ENST00000611833 DDX4Q9NQI0 724 aaKnown RBP19.26■□□□□ 0.67
NEK3-206ENST00000611833 PPEF1O14829 653 aaPredicted RBP19.26■□□□□ 0.67
NEK3-206ENST00000611833 FCER1AP12319 257 aa19.26■□□□□ 0.67
NEK3-206ENST00000611833 EIF6P56537 245 aaKnown RBP19.26■□□□□ 0.67
NEK3-206ENST00000611833 FAM193AP78312 1265 aa19.26■□□□□ 0.67
NEK3-206ENST00000611833 ORC2Q13416 577 aaPredicted RBP19.26■□□□□ 0.67
NEK3-206ENST00000611833 WHAMMP3Q1A5X7 153 aa19.26■□□□□ 0.67
NEK3-206ENST00000611833 CNNM4Q6P4Q7 775 aa19.26■□□□□ 0.67
NEK3-206ENST00000611833 COA7Q96BR5 231 aa19.26■□□□□ 0.67
NEK3-206ENST00000611833 CNOT6LQ96LI5 555 aaKnown RBP19.26■□□□□ 0.67
NEK3-206ENST00000611833 NUP58Q9BVL2 599 aa19.26■□□□□ 0.67
NEK3-206ENST00000611833 ZNHIT6Q9NWK9 470 aaKnown RBP19.26■□□□□ 0.67
NEK3-206ENST00000611833 REXO2Q9Y3B8 237 aaKnown RBP19.26■□□□□ 0.67
NEK3-206ENST00000611833 CTAGE15A4D2H0 777 aa19.25■□□□□ 0.67
NEK3-206ENST00000611833 POLR3GO15318 223 aaPredicted RBP19.25■□□□□ 0.67
NEK3-206ENST00000611833 CTAGE8P0CG41 777 aa19.25■□□□□ 0.67
NEK3-206ENST00000611833 CALCRLQ16602 461 aa19.25■□□□□ 0.67
NEK3-206ENST00000611833 SV2BQ7L1I2 683 aa19.25■□□□□ 0.67
NEK3-206ENST00000611833 CTAGE6Q86UF2 777 aa19.25■□□□□ 0.67
NEK3-206ENST00000611833 CTAGE4Q8IX94 777 aa19.25■□□□□ 0.67
NEK3-206ENST00000611833 SP8Q8IXZ3 490 aa19.25■□□□□ 0.67
NEK3-206ENST00000611833 CERS5Q8N5B7 392 aa19.25■□□□□ 0.67
NEK3-206ENST00000611833 HAUS4Q9H6D7 363 aa19.25■□□□□ 0.67
NEK3-206ENST00000611833 ANKZF1Q9H8Y5 726 aa19.25■□□□□ 0.67
NEK3-206ENST00000611833 IGKV6D-41A0A0C4DH26 115 aa19.25■□□□□ 0.67
NEK3-206ENST00000611833 hCG_1984214I3L0E3 225 aa19.25■□□□□ 0.67
NEK3-206ENST00000611833 LONRF2Q1L5Z9 754 aa19.25■□□□□ 0.67
NEK3-206ENST00000611833 SLC27A3Q5K4L6 730 aa19.25■□□□□ 0.67
NEK3-206ENST00000611833 WDR59Q6PJI9 974 aa19.25■□□□□ 0.67
NEK3-206ENST00000611833 DPP8Q6V1X1 898 aaPredicted RBP19.25■□□□□ 0.67
NEK3-206ENST00000611833 ZNF713Q8N859 430 aaPredicted RBP19.25■□□□□ 0.67
NEK3-206ENST00000611833 NOC4LQ9BVI4 516 aaKnown RBP19.25■□□□□ 0.67
NEK3-206ENST00000611833 TRIM10Q9UDY6 481 aa19.25■□□□□ 0.67
NEK3-206ENST00000611833 LRWD1Q9UFC0 647 aa19.25■□□□□ 0.67
NEK3-206ENST00000611833 MYO6Q9UM54 1294 aa19.25■□□□□ 0.67
NEK3-206ENST00000611833 TFRCP02786 760 aaKnown RBP19.24■□□□□ 0.67
NEK3-206ENST00000611833 SNHG28P0DPA3 235 aa19.24■□□□□ 0.67
NEK3-206ENST00000611833 ADCY7P51828 1080 aa19.24■□□□□ 0.67
NEK3-206ENST00000611833 KRT83P78385 493 aa19.24■□□□□ 0.67
NEK3-206ENST00000611833 TMEM266Q2M3C6 531 aa19.24■□□□□ 0.67
NEK3-206ENST00000611833 ASPRV1Q53RT3 343 aa19.24■□□□□ 0.67
NEK3-206ENST00000611833 CDK5RAP3Q96JB5 506 aa19.24■□□□□ 0.67
NEK3-206ENST00000611833 MTMR9Q96QG7 549 aa19.24■□□□□ 0.67
NEK3-206ENST00000611833 FUT8Q9BYC5 575 aa19.24■□□□□ 0.67
NEK3-206ENST00000611833 COA1Q9GZY4 146 aa19.24■□□□□ 0.67
NEK3-206ENST00000611833 AGPAT5Q9NUQ2 364 aa19.24■□□□□ 0.67
NEK3-206ENST00000611833 EDIL3O43854 480 aa19.24■□□□□ 0.67
NEK3-206ENST00000611833 SMC1AQ14683 1233 aaKnown RBP19.24■□□□□ 0.67
NEK3-206ENST00000611833 RETREG2Q8NC44 543 aa19.24■□□□□ 0.67
NEK3-206ENST00000611833 SLC39A2Q9NP94 309 aa19.24■□□□□ 0.67
NEK3-206ENST00000611833 CYLC1P35663 651 aaPredicted RBP19.23■□□□□ 0.67
NEK3-206ENST00000611833 CCDC122Q5T0U0 273 aa19.23■□□□□ 0.67
NEK3-206ENST00000611833 KIAA1328Q86T90 577 aa19.23■□□□□ 0.67
NEK3-206ENST00000611833 HPS3Q969F9 1004 aa19.23■□□□□ 0.67
NEK3-206ENST00000611833 MXD3Q9BW11 206 aa19.23■□□□□ 0.67
NEK3-206ENST00000611833 GPCPD1Q9NPB8 672 aa19.23■□□□□ 0.67
NEK3-206ENST00000611833 ATP6V0A2Q9Y487 856 aa19.23■□□□□ 0.67
NEK3-206ENST00000611833 SLC37A4O43826 429 aa19.23■□□□□ 0.67
NEK3-206ENST00000611833 RHOXF2BP0C7M4 288 aa19.23■□□□□ 0.67
NEK3-206ENST00000611833 KLK7P49862 253 aa19.23■□□□□ 0.67
NEK3-206ENST00000611833 FKBP15Q5T1M5 1219 aa19.23■□□□□ 0.67
NEK3-206ENST00000611833 TMC4Q7Z404 712 aa19.23■□□□□ 0.67
NEK3-206ENST00000611833 RHOXF2Q9BQY4 288 aa19.23■□□□□ 0.67
NEK3-206ENST00000611833 ANKRD31Q8N7Z5 1873 aa19.22■□□□□ 0.67
NEK3-206ENST00000611833 ERLIN1O75477 346 aa19.22■□□□□ 0.67
NEK3-206ENST00000611833 IPO7O95373 1038 aaKnown RBP19.22■□□□□ 0.67
NEK3-206ENST00000611833 TDP2O95551 362 aa19.22■□□□□ 0.67
NEK3-206ENST00000611833 HERVK_113P62684 666 aa19.22■□□□□ 0.67
NEK3-206ENST00000611833 ZBED6P86452 979 aa19.22■□□□□ 0.67
NEK3-206ENST00000611833 GRB10Q13322 594 aa19.22■□□□□ 0.67
NEK3-206ENST00000611833 KIAA0895Q8NCT3 520 aa19.22■□□□□ 0.67
NEK3-206ENST00000611833 MSANTD4Q8NCY6 345 aa19.22■□□□□ 0.67
NEK3-206ENST00000611833 RAB34Q9BZG1 259 aa19.22■□□□□ 0.67
NEK3-206ENST00000611833 SERPINB13Q9UIV8 391 aa19.22■□□□□ 0.67
NEK3-206ENST00000611833 TRPC5Q9UL62 973 aaPredicted RBP19.22■□□□□ 0.67
NEK3-206ENST00000611833 SUGT1Q9Y2Z0 365 aa19.22■□□□□ 0.67
NEK3-206ENST00000611833 QSER1Q2KHR3 1735 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms