RNA–Protein interactions for RNA: ENST00000589575.5

PTBP1-214, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-214ENST00000589575 HOMER1Q86YM7 354 aa15.22■□□□□ 0.03
PTBP1-214ENST00000589575 TDHQ8IZJ6 230 aa15.22■□□□□ 0.03
PTBP1-214ENST00000589575 AMNQ9BXJ7 453 aa15.22■□□□□ 0.03
PTBP1-214ENST00000589575 LSG1Q9H089 658 aaKnown RBP15.22■□□□□ 0.03
PTBP1-214ENST00000589575 UPF3AQ9H1J1 476 aaKnown RBP15.22■□□□□ 0.03
PTBP1-214ENST00000589575 PLXNA1Q9UIW2 1896 aa15.22■□□□□ 0.03
PTBP1-214ENST00000589575 FRMPD3Q5JV73 1810 aa15.22■□□□□ 0.03
PTBP1-214ENST00000589575 LOC102724159A0A0B4J2E5 919 aa15.21■□□□□ 0.03
PTBP1-214ENST00000589575 DCDC2CA8MYV0 355 aa15.21■□□□□ 0.03
PTBP1-214ENST00000589575 SLC27A2O14975 620 aa15.21■□□□□ 0.03
PTBP1-214ENST00000589575 CLTBP09497 229 aa15.21■□□□□ 0.03
PTBP1-214ENST00000589575 SMPD1P17405 629 aa15.21■□□□□ 0.03
PTBP1-214ENST00000589575 PWP2Q15269 919 aaKnown RBP15.21■□□□□ 0.03
PTBP1-214ENST00000589575 FSCN1Q16658 493 aaKnown RBP15.21■□□□□ 0.03
PTBP1-214ENST00000589575 TAPT1Q6NXT6 567 aa15.21■□□□□ 0.03
PTBP1-214ENST00000589575 NFXL1Q6ZNB6 911 aa15.21■□□□□ 0.03
PTBP1-214ENST00000589575 RGS22Q8NE09 1264 aa15.21■□□□□ 0.03
PTBP1-214ENST00000589575 DNERQ8NFT8 737 aa15.21■□□□□ 0.03
PTBP1-214ENST00000589575 MORC4Q8TE76 937 aa15.21■□□□□ 0.03
PTBP1-214ENST00000589575 WDR11Q9BZH6 1224 aa15.21■□□□□ 0.03
PTBP1-214ENST00000589575 SENP2Q9HC62 589 aa15.21■□□□□ 0.03
PTBP1-214ENST00000589575 PDLIM7Q9NR12 457 aa15.21■□□□□ 0.03
PTBP1-214ENST00000589575 MAD2L2Q9UI95 211 aa15.21■□□□□ 0.03
PTBP1-214ENST00000589575 ALPK3Q96L96 1907 aa15.2■□□□□ 0.02
PTBP1-214ENST00000589575 PALM3A6NDB9 673 aaPredicted RBP15.2■□□□□ 0.02
PTBP1-214ENST00000589575 PRC1O43663 620 aa15.2■□□□□ 0.02
PTBP1-214ENST00000589575 CFBP00751 764 aa15.2■□□□□ 0.02
PTBP1-214ENST00000589575 MCM5P33992 734 aa15.2■□□□□ 0.02
PTBP1-214ENST00000589575 GRM4Q14833 912 aa15.2■□□□□ 0.02
PTBP1-214ENST00000589575 RNF20Q5VTR2 975 aa15.2■□□□□ 0.02
PTBP1-214ENST00000589575 CREB3L3Q68CJ9 461 aa15.2■□□□□ 0.02
PTBP1-214ENST00000589575 CCSAPQ6IQ19 270 aaPredicted RBP15.2■□□□□ 0.02
PTBP1-214ENST00000589575 MB21D2Q8IYB1 491 aaPredicted RBP15.2■□□□□ 0.02
PTBP1-214ENST00000589575 TMEM39AQ9NV64 488 aa15.2■□□□□ 0.02
PTBP1-214ENST00000589575 GNEQ9Y223 722 aaKnown RBP15.2■□□□□ 0.02
PTBP1-214ENST00000589575 ELP1O95163 1332 aa15.19■□□□□ 0.02
PTBP1-214ENST00000589575 A0A0U1RQG5 324 aaPredicted RBP15.19■□□□□ 0.02
PTBP1-214ENST00000589575 CCDC69A6NI79 296 aa15.19■□□□□ 0.02
PTBP1-214ENST00000589575 ZBTB5O15062 677 aa15.19■□□□□ 0.02
PTBP1-214ENST00000589575 CDC45O75419 566 aa15.19■□□□□ 0.02
PTBP1-214ENST00000589575 RAG1P15918 1043 aa15.19■□□□□ 0.02
PTBP1-214ENST00000589575 PTGS1P23219 599 aa15.19■□□□□ 0.02
PTBP1-214ENST00000589575 ANTXR2P58335 489 aa15.19■□□□□ 0.02
PTBP1-214ENST00000589575 TRAF1Q13077 416 aa15.19■□□□□ 0.02
PTBP1-214ENST00000589575 PPP2R5BQ15173 497 aa15.19■□□□□ 0.02
PTBP1-214ENST00000589575 CXCL17Q6UXB2 119 aa15.19■□□□□ 0.02
PTBP1-214ENST00000589575 SH3RF1Q7Z6J0 888 aa15.19■□□□□ 0.02
PTBP1-214ENST00000589575 CTCFLQ8NI51 663 aaPredicted RBP15.19■□□□□ 0.02
PTBP1-214ENST00000589575 SYTL5Q8TDW5 730 aaPredicted RBP15.19■□□□□ 0.02
PTBP1-214ENST00000589575 IGDCC4Q8TDY8 1250 aa15.19■□□□□ 0.02
PTBP1-214ENST00000589575 PIBF1Q8WXW3 757 aa15.19■□□□□ 0.02
PTBP1-214ENST00000589575 TBC1D5Q92609 795 aa15.19■□□□□ 0.02
PTBP1-214ENST00000589575 BADQ92934 168 aa15.19■□□□□ 0.02
PTBP1-214ENST00000589575 PCDHA1Q9Y5I3 950 aa15.19■□□□□ 0.02
PTBP1-214ENST00000589575 MROH7Q68CQ1 1323 aa15.18■□□□□ 0.02
PTBP1-214ENST00000589575 TRIM43BA6NCK2 446 aa15.18■□□□□ 0.02
PTBP1-214ENST00000589575 DUSP28Q4G0W2 176 aa15.18■□□□□ 0.02
PTBP1-214ENST00000589575 TMEM63BQ5T3F8 832 aa15.18■□□□□ 0.02
PTBP1-214ENST00000589575 ARHGEF16Q5VV41 709 aa15.18■□□□□ 0.02
PTBP1-214ENST00000589575 ZNF654Q8IZM8 581 aa15.18■□□□□ 0.02
PTBP1-214ENST00000589575 OR6J1Q8NGC5 347 aa15.18■□□□□ 0.02
PTBP1-214ENST00000589575 NSUN6Q8TEA1 469 aaKnown RBP15.18■□□□□ 0.02
PTBP1-214ENST00000589575 SCFD2Q8WU76 684 aa15.18■□□□□ 0.02
PTBP1-214ENST00000589575 TRIM43Q96BQ3 446 aaPredicted RBP15.18■□□□□ 0.02
PTBP1-214ENST00000589575 LRCH3Q96II8 777 aa15.18■□□□□ 0.02
PTBP1-214ENST00000589575 TMEM87BQ96K49 555 aa15.18■□□□□ 0.02
PTBP1-214ENST00000589575 TAAR1Q96RJ0 339 aa15.18■□□□□ 0.02
PTBP1-214ENST00000589575 PIGSQ96S52 555 aa15.18■□□□□ 0.02
PTBP1-214ENST00000589575 RMDN3Q96TC7 470 aa15.18■□□□□ 0.02
PTBP1-214ENST00000589575 MYL10Q9BUA6 226 aa15.18■□□□□ 0.02
PTBP1-214ENST00000589575 MAF1Q9H063 256 aa15.18■□□□□ 0.02
PTBP1-214ENST00000589575 GPHNQ9NQX3 736 aaPredicted RBP15.18■□□□□ 0.02
PTBP1-214ENST00000589575 Q9Y3F1 56 aa15.18■□□□□ 0.02
PTBP1-214ENST00000589575 ARVCFO00192 962 aa15.17■□□□□ 0.02
PTBP1-214ENST00000589575 SOX1O00570 391 aaPredicted RBP15.17■□□□□ 0.02
PTBP1-214ENST00000589575 CTAGE5O15320 804 aa15.17■□□□□ 0.02
PTBP1-214ENST00000589575 TLR3O15455 904 aaKnown RBP15.17■□□□□ 0.02
PTBP1-214ENST00000589575 CABYRO75952 493 aa15.17■□□□□ 0.02
PTBP1-214ENST00000589575 DDAH1O94760 285 aa15.17■□□□□ 0.02
PTBP1-214ENST00000589575 EIF2AK2P19525 551 aaKnown RBP15.17■□□□□ 0.02
PTBP1-214ENST00000589575 EDNRBP24530 442 aa15.17■□□□□ 0.02
PTBP1-214ENST00000589575 KIF5BP33176 963 aa15.17■□□□□ 0.02
PTBP1-214ENST00000589575 NKX3-2P78367 333 aa15.17■□□□□ 0.02
PTBP1-214ENST00000589575 TROAPQ12815 778 aa15.17■□□□□ 0.02
PTBP1-214ENST00000589575 NECTIN1Q15223 517 aa15.17■□□□□ 0.02
PTBP1-214ENST00000589575 BRDTQ58F21 947 aaPredicted RBP15.17■□□□□ 0.02
PTBP1-214ENST00000589575 ANKRD33Q7Z3H0 272 aa15.17■□□□□ 0.02
PTBP1-214ENST00000589575 TMTC2Q8N394 836 aa15.17■□□□□ 0.02
PTBP1-214ENST00000589575 TOX2Q96NM4 488 aa15.17■□□□□ 0.02
PTBP1-214ENST00000589575 LY9Q9HBG7 655 aa15.17■□□□□ 0.02
PTBP1-214ENST00000589575 CEP290O15078 2479 aa15.17■□□□□ 0.02
PTBP1-214ENST00000589575 SMCHD1A6NHR9 2005 aa15.16■□□□□ 0.02
PTBP1-214ENST00000589575 PNMA6FA0A0J9YX94 578 aa15.16■□□□□ 0.02
PTBP1-214ENST00000589575 NKRFO15226 690 aaKnown RBP eCLIP15.16■□□□□ 0.022e-8■□□□□ 10.2
PTBP1-214ENST00000589575 PPP1R11O60927 126 aaPredicted RBP15.16■□□□□ 0.02
PTBP1-214ENST00000589575 MYL3P08590 195 aa15.16■□□□□ 0.02
PTBP1-214ENST00000589575 TXNP10599 105 aaKnown RBP15.16■□□□□ 0.02
PTBP1-214ENST00000589575 CPT1AP50416 773 aa15.16■□□□□ 0.02
PTBP1-214ENST00000589575 FAAP100Q0VG06 881 aa15.16■□□□□ 0.02
PTBP1-214ENST00000589575 TTLL4Q14679 1199 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 214.9 ms