RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 ZBED6P86452 979 aa18.84■□□□□ 0.61
PRKCSH-205ENST00000587327 DIXDC1Q155Q3 683 aa18.84■□□□□ 0.61
PRKCSH-205ENST00000587327 TXNRD1Q16881 649 aa18.84■□□□□ 0.61
PRKCSH-205ENST00000587327 ZNF444Q8N0Y2 327 aaPredicted RBP18.84■□□□□ 0.61
PRKCSH-205ENST00000587327 SH3RF3Q8TEJ3 882 aaPredicted RBP18.84■□□□□ 0.61
PRKCSH-205ENST00000587327 CCDC47Q96A33 483 aaKnown RBP18.84■□□□□ 0.61
PRKCSH-205ENST00000587327 JAKMIP2Q96AA8 810 aa18.84■□□□□ 0.61
PRKCSH-205ENST00000587327 EEF2KMTQ96G04 330 aa18.84■□□□□ 0.61
PRKCSH-205ENST00000587327 LZTS2Q9BRK4 669 aa18.84■□□□□ 0.61
PRKCSH-205ENST00000587327 ZMYND12Q9H0C1 365 aa18.84■□□□□ 0.61
PRKCSH-205ENST00000587327 NHEJ1Q9H9Q4 299 aaPredicted RBP18.84■□□□□ 0.61
PRKCSH-205ENST00000587327 BRWD3Q6RI45 1802 aa18.84■□□□□ 0.61
PRKCSH-205ENST00000587327 LRRIQ3A6PVS8 624 aaPredicted RBP18.83■□□□□ 0.61
PRKCSH-205ENST00000587327 EIF3CLB5ME19 914 aaKnown RBP18.83■□□□□ 0.61
PRKCSH-205ENST00000587327 PDE4DQ08499 809 aa18.83■□□□□ 0.61
PRKCSH-205ENST00000587327 STK4Q13043 487 aa18.83■□□□□ 0.61
PRKCSH-205ENST00000587327 FAM114A1Q8IWE2 563 aa18.83■□□□□ 0.61
PRKCSH-205ENST00000587327 RPGRIP1Q96KN7 1286 aa18.83■□□□□ 0.61
PRKCSH-205ENST00000587327 EIF3CQ99613 913 aaKnown RBP18.83■□□□□ 0.61
PRKCSH-205ENST00000587327 C7orf25Q9BPX7 421 aa18.83■□□□□ 0.61
PRKCSH-205ENST00000587327 TMEM47Q9BQJ4 181 aa18.83■□□□□ 0.61
PRKCSH-205ENST00000587327 LACRTQ9GZZ8 138 aa18.83■□□□□ 0.61
PRKCSH-205ENST00000587327 STX8Q9UNK0 236 aa18.83■□□□□ 0.61
PRKCSH-205ENST00000587327 FAN1Q9Y2M0 1017 aa18.83■□□□□ 0.61
PRKCSH-205ENST00000587327 SRGAP2O75044 1071 aa18.83■□□□□ 0.6
PRKCSH-205ENST00000587327 OR52Z1P0C646 297 aa18.83■□□□□ 0.6
PRKCSH-205ENST00000587327 MCM3P25205 808 aa18.83■□□□□ 0.6
PRKCSH-205ENST00000587327 KLK7P49862 253 aa18.83■□□□□ 0.6
PRKCSH-205ENST00000587327 RAD51AP2Q09MP3 1159 aa18.83■□□□□ 0.6
PRKCSH-205ENST00000587327 HSP90B2PQ58FF3 399 aa18.83■□□□□ 0.6
PRKCSH-205ENST00000587327 SLC27A3Q5K4L6 730 aa18.83■□□□□ 0.6
PRKCSH-205ENST00000587327 AMOTL1Q8IY63 956 aa18.83■□□□□ 0.6
PRKCSH-205ENST00000587327 FAM71BQ8TC56 605 aa18.83■□□□□ 0.6
PRKCSH-205ENST00000587327 CNOT6LQ96LI5 555 aaKnown RBP18.83■□□□□ 0.6
PRKCSH-205ENST00000587327 MTMR7Q9Y216 660 aa18.83■□□□□ 0.6
PRKCSH-205ENST00000587327 RCCD1A6NED2 376 aa18.82■□□□□ 0.6
PRKCSH-205ENST00000587327 KLRF2D3W0D1 207 aa18.82■□□□□ 0.6
PRKCSH-205ENST00000587327 UFL1O94874 794 aa18.82■□□□□ 0.6
PRKCSH-205ENST00000587327 IPO7O95373 1038 aaKnown RBP18.82■□□□□ 0.6
PRKCSH-205ENST00000587327 ACTN2P35609 894 aa18.82■□□□□ 0.6
PRKCSH-205ENST00000587327 PPP1R2P41236 205 aa18.82■□□□□ 0.6
PRKCSH-205ENST00000587327 DDR1Q08345 913 aa18.82■□□□□ 0.6
PRKCSH-205ENST00000587327 MIIPQ5JXC2 388 aa18.82■□□□□ 0.6
PRKCSH-205ENST00000587327 ZSCAN29Q8IWY8 852 aaPredicted RBP18.82■□□□□ 0.6
PRKCSH-205ENST00000587327 CCDC102AQ96A19 550 aa18.82■□□□□ 0.6
PRKCSH-205ENST00000587327 ACBD3Q9H3P7 528 aa18.82■□□□□ 0.6
PRKCSH-205ENST00000587327 VIPAS39Q9H9C1 493 aa18.82■□□□□ 0.6
PRKCSH-205ENST00000587327 MED4Q9NPJ6 270 aa18.82■□□□□ 0.6
PRKCSH-205ENST00000587327 CCNT1O60563 726 aaKnown RBP18.82■□□□□ 0.6
PRKCSH-205ENST00000587327 CDK17Q00537 523 aa18.82■□□□□ 0.6
PRKCSH-205ENST00000587327 LETM2Q2VYF4 491 aa18.82■□□□□ 0.6
PRKCSH-205ENST00000587327 FIGNQ5HY92 759 aa18.82■□□□□ 0.6
PRKCSH-205ENST00000587327 KRT25Q7Z3Z0 450 aa18.82■□□□□ 0.6
PRKCSH-205ENST00000587327 SLC44A5Q8NCS7 719 aa18.82■□□□□ 0.6
PRKCSH-205ENST00000587327 ZBTB9Q96C00 473 aa18.82■□□□□ 0.6
PRKCSH-205ENST00000587327 A0A1W2PQJ5 194 aa18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 TARSL2A2RTX5 802 aaKnown RBP18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 GOLGA8HP0CJ92 632 aa18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 MTIF2P46199 727 aaKnown RBP18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 ASIC1P78348 528 aa18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 CKAP4Q07065 602 aaKnown RBP18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 NONOQ15233 471 aaKnown RBP eCLIP18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 ERGIC2Q96RQ1 377 aa18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 NOC4LQ9BVI4 516 aaKnown RBP18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 SPZ1Q9BXG8 430 aa18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 QTRT2Q9H974 415 aaKnown RBP18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 CDK5RAP2Q96SN8 1893 aa18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 LTBP1Q14766 1721 aa18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 ANO9A1A5B4 782 aa18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 BAG3O95817 575 aa18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 FCER1AP12319 257 aa18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 NAPAP54920 295 aa18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 AMPD3Q01432 767 aa18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 TGFBRAP1Q8WUH2 860 aa18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 PURBQ96QR8 312 aaKnown RBP18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 CWC15Q9P013 229 aaKnown RBP18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 DUSP10Q9Y6W6 482 aa18.81■□□□□ 0.6
PRKCSH-205ENST00000587327 LRRC37AA6NMS7 1700 aa18.8■□□□□ 0.6
PRKCSH-205ENST00000587327 DDX60LQ5H9U9 1706 aaKnown RBP18.8■□□□□ 0.6
PRKCSH-205ENST00000587327 CAPN2P17655 700 aa18.8■□□□□ 0.6
PRKCSH-205ENST00000587327 RASA1P20936 1047 aa18.8■□□□□ 0.6
PRKCSH-205ENST00000587327 PPP4CP60510 307 aa18.8■□□□□ 0.6
PRKCSH-205ENST00000587327 GSTO1P78417 241 aa18.8■□□□□ 0.6
PRKCSH-205ENST00000587327 MAP9Q49MG5 647 aa18.8■□□□□ 0.6
PRKCSH-205ENST00000587327 COBLL1Q53SF7 1204 aa18.8■□□□□ 0.6
PRKCSH-205ENST00000587327 RBM17Q96I25 401 aaKnown RBP18.8■□□□□ 0.6
PRKCSH-205ENST00000587327 CAPZA3Q96KX2 299 aa18.8■□□□□ 0.6
PRKCSH-205ENST00000587327 PCMTD1Q96MG8 357 aaPredicted RBP18.8■□□□□ 0.6
PRKCSH-205ENST00000587327 RTFDC1Q9BY42 306 aaPredicted RBP18.8■□□□□ 0.6
PRKCSH-205ENST00000587327 CD209Q9NNX6 404 aa18.8■□□□□ 0.6
PRKCSH-205ENST00000587327 SMCO2A6NFE2 343 aa18.79■□□□□ 0.6
PRKCSH-205ENST00000587327 ATP2B4P23634 1241 aa18.79■□□□□ 0.6
PRKCSH-205ENST00000587327 GNA11P29992 359 aa18.79■□□□□ 0.6
PRKCSH-205ENST00000587327 TECP42680 631 aa18.79■□□□□ 0.6
PRKCSH-205ENST00000587327 AARSP49588 968 aaKnown RBP eCLIP18.79■□□□□ 0.6
PRKCSH-205ENST00000587327 CNNM4Q6P4Q7 775 aa18.79■□□□□ 0.6
PRKCSH-205ENST00000587327 NEK8Q86SG6 692 aa18.79■□□□□ 0.6
PRKCSH-205ENST00000587327 C6orf50Q9HD87 102 aa18.79■□□□□ 0.6
PRKCSH-205ENST00000587327 RNF216Q9NWF9 866 aaPredicted RBP18.79■□□□□ 0.6
PRKCSH-205ENST00000587327 GGA1Q9UJY5 639 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms