RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 NEK1Q96PY6 1258 aa23.97■■□□□ 1.43
CIRBP-209ENST00000586555 AMNQ9BXJ7 453 aa23.97■■□□□ 1.43
CIRBP-209ENST00000586555 MRPL11Q9Y3B7 192 aaKnown RBP23.97■■□□□ 1.43
CIRBP-209ENST00000586555 DDAH1O94760 285 aa23.96■■□□□ 1.43
CIRBP-209ENST00000586555 CALML3P27482 149 aa23.96■■□□□ 1.43
CIRBP-209ENST00000586555 TSGA10IPQ3SY00 556 aa23.96■■□□□ 1.43
CIRBP-209ENST00000586555 NUP133Q8WUM0 1156 aa23.96■■□□□ 1.43
CIRBP-209ENST00000586555 LY9Q9HBG7 655 aa23.96■■□□□ 1.43
CIRBP-209ENST00000586555 PDLIM7Q9NR12 457 aa23.96■■□□□ 1.43
CIRBP-209ENST00000586555 ZBTB5O15062 677 aa23.95■■□□□ 1.42
CIRBP-209ENST00000586555 HMGB1P09429 215 aaKnown RBP23.95■■□□□ 1.42
CIRBP-209ENST00000586555 CALM1P0DP23 149 aa23.95■■□□□ 1.42
CIRBP-209ENST00000586555 CALM2P0DP24 149 aa23.95■■□□□ 1.42
CIRBP-209ENST00000586555 CALM3P0DP25 149 aa23.95■■□□□ 1.42
CIRBP-209ENST00000586555 LIFRP42702 1097 aa23.95■■□□□ 1.42
CIRBP-209ENST00000586555 ZNF654Q8IZM8 581 aa23.95■■□□□ 1.42
CIRBP-209ENST00000586555 DEFB123Q8N688 67 aa23.95■■□□□ 1.42
CIRBP-209ENST00000586555 KLHDC9Q8NEP7 349 aa23.95■■□□□ 1.42
CIRBP-209ENST00000586555 LENG1Q96BZ8 264 aaPredicted RBP23.95■■□□□ 1.42
CIRBP-209ENST00000586555 TSEN34Q9BSV6 310 aaKnown RBP23.95■■□□□ 1.42
CIRBP-209ENST00000586555 SPC25Q9HBM1 224 aa23.95■■□□□ 1.42
CIRBP-209ENST00000586555 SENP2Q9HC62 589 aa23.95■■□□□ 1.42
CIRBP-209ENST00000586555 LAMA2P24043 3122 aaKnown RBP23.95■■□□□ 1.42
CIRBP-209ENST00000586555 TRIM43BA6NCK2 446 aa23.94■■□□□ 1.42
CIRBP-209ENST00000586555 SH2B2O14492 632 aaPredicted RBP23.94■■□□□ 1.42
CIRBP-209ENST00000586555 DUSP11O75319 330 aaKnown RBP23.94■■□□□ 1.42
CIRBP-209ENST00000586555 GNAQP50148 359 aa23.94■■□□□ 1.42
CIRBP-209ENST00000586555 RPS6P62753 249 aaKnown RBP23.94■■□□□ 1.42
CIRBP-209ENST00000586555 TLE2Q04725 743 aa23.94■■□□□ 1.42
CIRBP-209ENST00000586555 CCDC144BQ3MJ40 725 aa23.94■■□□□ 1.42
CIRBP-209ENST00000586555 CCSAPQ6IQ19 270 aaPredicted RBP23.94■■□□□ 1.42
CIRBP-209ENST00000586555 SYNE3Q6ZMZ3 975 aa23.94■■□□□ 1.42
CIRBP-209ENST00000586555 Q7L0L9 218 aa23.94■■□□□ 1.42
CIRBP-209ENST00000586555 SH3RF1Q7Z6J0 888 aa23.94■■□□□ 1.42
CIRBP-209ENST00000586555 DNERQ8NFT8 737 aa23.94■■□□□ 1.42
CIRBP-209ENST00000586555 TRIM43Q96BQ3 446 aaPredicted RBP23.94■■□□□ 1.42
CIRBP-209ENST00000586555 LZTS2Q9BRK4 669 aa23.94■■□□□ 1.42
CIRBP-209ENST00000586555 SYNRGQ9UMZ2 1314 aa23.93■■□□□ 1.42
CIRBP-209ENST00000586555 ALDH5A1P51649 535 aaPredicted RBP23.93■■□□□ 1.42
CIRBP-209ENST00000586555 RIOX1Q9H6W3 641 aa23.93■■□□□ 1.42
CIRBP-209ENST00000586555 MTMR10Q9NXD2 777 aa23.93■■□□□ 1.42
CIRBP-209ENST00000586555 SLC12A7Q9Y666 1083 aa23.93■■□□□ 1.42
CIRBP-209ENST00000586555 A0A1W2PQ45 241 aaPredicted RBP23.92■■□□□ 1.42
CIRBP-209ENST00000586555 A0A1W2PQY0 241 aa23.92■■□□□ 1.42
CIRBP-209ENST00000586555 SLC30A10Q6XR72 485 aa23.92■■□□□ 1.42
CIRBP-209ENST00000586555 DHX32Q7L7V1 743 aaKnown RBP23.92■■□□□ 1.42
CIRBP-209ENST00000586555 HOMER1Q86YM7 354 aa23.92■■□□□ 1.42
CIRBP-209ENST00000586555 MORC4Q8TE76 937 aa23.92■■□□□ 1.42
CIRBP-209ENST00000586555 MTMR8Q96EF0 704 aa23.92■■□□□ 1.42
CIRBP-209ENST00000586555 KATNBL1Q9H079 304 aa23.92■■□□□ 1.42
CIRBP-209ENST00000586555 VTA1Q9NP79 307 aa23.92■■□□□ 1.42
CIRBP-209ENST00000586555 PCDHA1Q9Y5I3 950 aa23.92■■□□□ 1.42
CIRBP-209ENST00000586555 MOXD2PA6NHM9 499 aa23.91■■□□□ 1.42
CIRBP-209ENST00000586555 EPB41L2O43491 1005 aaKnown RBP23.91■■□□□ 1.42
CIRBP-209ENST00000586555 CST5P28325 142 aaPredicted RBP23.91■■□□□ 1.42
CIRBP-209ENST00000586555 SMARCA1P28370 1054 aa23.91■■□□□ 1.42
CIRBP-209ENST00000586555 ACLYP53396 1101 aa23.91■■□□□ 1.42
CIRBP-209ENST00000586555 TNFAIP2Q03169 654 aa23.91■■□□□ 1.42
CIRBP-209ENST00000586555 IQSEC1Q6DN90 963 aa23.91■■□□□ 1.42
CIRBP-209ENST00000586555 NOL8Q76FK4 1167 aaKnown RBP23.91■■□□□ 1.42
CIRBP-209ENST00000586555 SAMD3Q8N6K7 520 aa23.91■■□□□ 1.42
CIRBP-209ENST00000586555 BADQ92934 168 aa23.91■■□□□ 1.42
CIRBP-209ENST00000586555 PRDM5Q9NQX1 630 aaPredicted RBP23.91■■□□□ 1.42
CIRBP-209ENST00000586555 MAP3K20Q9NYL2 800 aaKnown RBP23.91■■□□□ 1.42
CIRBP-209ENST00000586555 MYH6P13533 1939 aa23.9■■□□□ 1.42
CIRBP-209ENST00000586555 PNMA6FA0A0J9YX94 578 aa23.9■■□□□ 1.42
CIRBP-209ENST00000586555 ADCY6O43306 1168 aa23.9■■□□□ 1.42
CIRBP-209ENST00000586555 PDE4DQ08499 809 aa23.9■■□□□ 1.42
CIRBP-209ENST00000586555 KCNA10Q16322 511 aa23.9■■□□□ 1.42
CIRBP-209ENST00000586555 FAM109BQ6ICB4 259 aaPredicted RBP23.9■■□□□ 1.42
CIRBP-209ENST00000586555 TOX2Q96NM4 488 aa23.9■■□□□ 1.42
CIRBP-209ENST00000586555 PURBQ96QR8 312 aaKnown RBP23.9■■□□□ 1.42
CIRBP-209ENST00000586555 PIGSQ96S52 555 aa23.9■■□□□ 1.42
CIRBP-209ENST00000586555 GPHNQ9NQX3 736 aaPredicted RBP23.9■■□□□ 1.42
CIRBP-209ENST00000586555 ASTN1O14525 1302 aa23.89■■□□□ 1.42
CIRBP-209ENST00000586555 MYADML2A6NDP7 307 aa23.89■■□□□ 1.41
CIRBP-209ENST00000586555 ITGB8P26012 769 aa23.89■■□□□ 1.41
CIRBP-209ENST00000586555 HSPA4P34932 840 aa23.89■■□□□ 1.41
CIRBP-209ENST00000586555 FGD1P98174 961 aa23.89■■□□□ 1.41
CIRBP-209ENST00000586555 SHHQ15465 462 aa23.89■■□□□ 1.41
CIRBP-209ENST00000586555 EEPD1Q7L9B9 569 aa23.89■■□□□ 1.41
CIRBP-209ENST00000586555 ANKRD33Q7Z3H0 272 aa23.89■■□□□ 1.41
CIRBP-209ENST00000586555 SGMS1Q86VZ5 419 aa23.89■■□□□ 1.41
CIRBP-209ENST00000586555 RASEFQ8IZ41 740 aa23.89■■□□□ 1.41
CIRBP-209ENST00000586555 PCSK9Q8NBP7 692 aaKnown RBP23.89■■□□□ 1.41
CIRBP-209ENST00000586555 RRP36Q96EU6 259 aaKnown RBP23.89■■□□□ 1.41
CIRBP-209ENST00000586555 MYL10Q9BUA6 226 aa23.89■■□□□ 1.41
CIRBP-209ENST00000586555 UPF3AQ9H1J1 476 aaKnown RBP23.89■■□□□ 1.41
CIRBP-209ENST00000586555 KIAA0355O15063 1070 aa23.88■■□□□ 1.41
CIRBP-209ENST00000586555 CLTBP09497 229 aa23.88■■□□□ 1.41
CIRBP-209ENST00000586555 C6orf222P0C671 652 aaPredicted RBP23.88■■□□□ 1.41
CIRBP-209ENST00000586555 GJA9P57773 515 aa23.88■■□□□ 1.41
CIRBP-209ENST00000586555 NKX3-2P78367 333 aa23.88■■□□□ 1.41
CIRBP-209ENST00000586555 IRX5P78411 483 aaPredicted RBP23.88■■□□□ 1.41
CIRBP-209ENST00000586555 EXOSC10Q01780 885 aaKnown RBP23.88■■□□□ 1.41
CIRBP-209ENST00000586555 C9orf50Q5SZB4 431 aa23.88■■□□□ 1.41
CIRBP-209ENST00000586555 NSUN6Q8TEA1 469 aaKnown RBP23.88■■□□□ 1.41
CIRBP-209ENST00000586555 SPZ1Q9BXG8 430 aa23.88■■□□□ 1.41
CIRBP-209ENST00000586555 LRRC2Q9BYS8 371 aa23.88■■□□□ 1.41
CIRBP-209ENST00000586555 AP5M1Q9H0R1 490 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms