RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 RBM47A0AV96 593 aaKnown RBP14.08□□□□□ -0.16
BRCA1-225ENST00000586385 RBAK-RBAKDNI3L0D1 243 aa14.08□□□□□ -0.16
BRCA1-225ENST00000586385 ARHGEF15O94989 841 aa14.08□□□□□ -0.16
BRCA1-225ENST00000586385 ICAM1P05362 532 aa14.08□□□□□ -0.16
BRCA1-225ENST00000586385 ALDH5A1P51649 535 aaPredicted RBP14.08□□□□□ -0.16
BRCA1-225ENST00000586385 KIAA1211Q6ZU35 1233 aa14.08□□□□□ -0.16
BRCA1-225ENST00000586385 CLEC4DQ8WXI8 215 aa14.08□□□□□ -0.16
BRCA1-225ENST00000586385 SLC28A3Q9HAS3 691 aa14.08□□□□□ -0.16
BRCA1-225ENST00000586385 ANAPC4Q9UJX5 808 aa14.08□□□□□ -0.16
BRCA1-225ENST00000586385 MTMR7Q9Y216 660 aa14.08□□□□□ -0.16
BRCA1-225ENST00000586385 EPOPA6NHQ4 379 aa14.07□□□□□ -0.16
BRCA1-225ENST00000586385 TSPY2A6NKD2 308 aa14.07□□□□□ -0.16
BRCA1-225ENST00000586385 ORC4O43929 436 aa14.07□□□□□ -0.16
BRCA1-225ENST00000586385 SLC3A2P08195 630 aaKnown RBP14.07□□□□□ -0.16
BRCA1-225ENST00000586385 MRPS5P82675 430 aaKnown RBP14.07□□□□□ -0.16
BRCA1-225ENST00000586385 PURAQ00577 322 aaKnown RBP14.07□□□□□ -0.16
BRCA1-225ENST00000586385 SLC30A10Q6XR72 485 aa14.07□□□□□ -0.16
BRCA1-225ENST00000586385 NECAB3Q96P71 396 aaPredicted RBP14.07□□□□□ -0.16
BRCA1-225ENST00000586385 SEZ6LQ9BYH1 1024 aa14.07□□□□□ -0.16
BRCA1-225ENST00000586385 MTIF3Q9H2K0 278 aaKnown RBP14.07□□□□□ -0.16
BRCA1-225ENST00000586385 PCDHA11Q9Y5I1 949 aa14.07□□□□□ -0.16
BRCA1-225ENST00000586385 SLC4A7Q9Y6M7 1214 aa14.07□□□□□ -0.16
BRCA1-225ENST00000586385 RFXAPO00287 272 aa14.06□□□□□ -0.16
BRCA1-225ENST00000586385 ZEB2O60315 1214 aa14.06□□□□□ -0.16
BRCA1-225ENST00000586385 BMP1P13497 986 aa14.06□□□□□ -0.16
BRCA1-225ENST00000586385 ATP2A2P16615 1042 aaKnown RBP14.06□□□□□ -0.16
BRCA1-225ENST00000586385 TFF2Q03403 129 aa14.06□□□□□ -0.16
BRCA1-225ENST00000586385 LRRFIP1Q32MZ4 808 aaKnown RBP14.06□□□□□ -0.16
BRCA1-225ENST00000586385 SYDE2Q5VT97 1194 aa14.06□□□□□ -0.16
BRCA1-225ENST00000586385 PPP2R2DQ66LE6 453 aa14.06□□□□□ -0.16
BRCA1-225ENST00000586385 DCAF4Q8WV16 495 aa14.06□□□□□ -0.16
BRCA1-225ENST00000586385 UHRF1Q96T88 793 aaPredicted RBP14.06□□□□□ -0.16
BRCA1-225ENST00000586385 TMEM47Q9BQJ4 181 aa14.06□□□□□ -0.16
BRCA1-225ENST00000586385 WDR11Q9BZH6 1224 aa14.06□□□□□ -0.16
BRCA1-225ENST00000586385 TNKSO95271 1327 aa14.06□□□□□ -0.16
BRCA1-225ENST00000586385 FRMPD2Q68DX3 1309 aaPredicted RBP14.06□□□□□ -0.16
BRCA1-225ENST00000586385 GBF1Q92538 1859 aa14.06□□□□□ -0.16
BRCA1-225ENST00000586385 ERC2O15083 957 aa14.05□□□□□ -0.16
BRCA1-225ENST00000586385 RANBP6O60518 1105 aaKnown RBP14.05□□□□□ -0.16
BRCA1-225ENST00000586385 MX1P20591 662 aa14.05□□□□□ -0.16
BRCA1-225ENST00000586385 EDNRBP24530 442 aa14.05□□□□□ -0.16
BRCA1-225ENST00000586385 ALX1Q15699 326 aa14.05□□□□□ -0.16
BRCA1-225ENST00000586385 CCDC96Q2M329 555 aa14.05□□□□□ -0.16
BRCA1-225ENST00000586385 RPUSD2Q8IZ73 545 aaKnown RBP14.05□□□□□ -0.16
BRCA1-225ENST00000586385 COPS5Q92905 334 aa14.05□□□□□ -0.16
BRCA1-225ENST00000586385 CTAGE1Q96RT6 745 aa14.05□□□□□ -0.16
BRCA1-225ENST00000586385 GPCPD1Q9NPB8 672 aa14.05□□□□□ -0.16
BRCA1-225ENST00000586385 REV3LO60673 3130 aa14.05□□□□□ -0.16
BRCA1-225ENST00000586385 ZBBXA8MT70 800 aa14.04□□□□□ -0.16
BRCA1-225ENST00000586385 CA3P07451 260 aa14.04□□□□□ -0.16
BRCA1-225ENST00000586385 MYL3P08590 195 aa14.04□□□□□ -0.16
BRCA1-225ENST00000586385 NBPF20Q3BBV1 942 aa14.04□□□□□ -0.16
BRCA1-225ENST00000586385 PPP4R3BQ5MIZ7 849 aa14.04□□□□□ -0.16
BRCA1-225ENST00000586385 KRT40Q6A162 431 aa14.04□□□□□ -0.16
BRCA1-225ENST00000586385 SPRED2Q7Z698 418 aa14.04□□□□□ -0.16
BRCA1-225ENST00000586385 DEFB128Q7Z7B8 93 aa14.04□□□□□ -0.16
BRCA1-225ENST00000586385 MTG1Q9BT17 334 aaPredicted RBP14.04□□□□□ -0.16
BRCA1-225ENST00000586385 POLR3EQ9NVU0 708 aa14.04□□□□□ -0.16
BRCA1-225ENST00000586385 NCOR1O75376 2440 aa14.04□□□□□ -0.16
BRCA1-225ENST00000586385 LOC102724159A0A0B4J2E5 919 aa14.03□□□□□ -0.16
BRCA1-225ENST00000586385 A0A0D9SFI3 127 aa14.03□□□□□ -0.16
BRCA1-225ENST00000586385 ARIH2O95376 493 aa14.03□□□□□ -0.16
BRCA1-225ENST00000586385 FGAP02671 866 aa14.03□□□□□ -0.16
BRCA1-225ENST00000586385 PDHBP11177 359 aa14.03□□□□□ -0.16
BRCA1-225ENST00000586385 TOP1P11387 765 aaKnown RBP14.03□□□□□ -0.16
BRCA1-225ENST00000586385 POU3F3P20264 500 aaPredicted RBP14.03□□□□□ -0.16
BRCA1-225ENST00000586385 KCNQ1P51787 676 aa14.03□□□□□ -0.16
BRCA1-225ENST00000586385 GPNMBQ14956 572 aa14.03□□□□□ -0.16
BRCA1-225ENST00000586385 PWP2Q15269 919 aaKnown RBP14.03□□□□□ -0.16
BRCA1-225ENST00000586385 OR6J1Q8NGC5 347 aa14.03□□□□□ -0.16
BRCA1-225ENST00000586385 FAM227BQ96M60 508 aa14.03□□□□□ -0.16
BRCA1-225ENST00000586385 CERS4Q9HA82 394 aa14.03□□□□□ -0.16
BRCA1-225ENST00000586385 TCP11L1Q9NUJ3 509 aa14.03□□□□□ -0.16
BRCA1-225ENST00000586385 ADD3Q9UEY8 706 aaKnown RBP14.03□□□□□ -0.16
BRCA1-225ENST00000586385 MTCH2Q9Y6C9 303 aa14.03□□□□□ -0.16
BRCA1-225ENST00000586385 SCN10AQ9Y5Y9 1956 aa14.03□□□□□ -0.16
BRCA1-225ENST00000586385 PRRC2BQ5JSZ5 2229 aaKnown RBP14.02□□□□□ -0.16
BRCA1-225ENST00000586385 PTPDC1A2A3K4 754 aa14.02□□□□□ -0.17
BRCA1-225ENST00000586385 A6NJR5 290 aa14.02□□□□□ -0.17
BRCA1-225ENST00000586385 PFKMP08237 780 aa14.02□□□□□ -0.17
BRCA1-225ENST00000586385 IQCF3P0C7M6 154 aa14.02□□□□□ -0.17
BRCA1-225ENST00000586385 SUPT20HL2P0C7V6 817 aa14.02□□□□□ -0.17
BRCA1-225ENST00000586385 SNHG28P0DPA3 235 aa14.02□□□□□ -0.17
BRCA1-225ENST00000586385 CALML3P27482 149 aa14.02□□□□□ -0.17
BRCA1-225ENST00000586385 CPT1AP50416 773 aa14.02□□□□□ -0.17
BRCA1-225ENST00000586385 RPS6P62753 249 aaKnown RBP14.02□□□□□ -0.17
BRCA1-225ENST00000586385 TAP1Q03518 808 aa14.02□□□□□ -0.17
BRCA1-225ENST00000586385 MICALL1Q8N3F8 863 aa14.02□□□□□ -0.17
BRCA1-225ENST00000586385 SCN5AQ14524 2016 aa14.02□□□□□ -0.17
BRCA1-225ENST00000586385 BDP1A6H8Y1 2624 aa14.01□□□□□ -0.17
BRCA1-225ENST00000586385 ZNF543Q08ER8 600 aa14.01□□□□□ -0.17
BRCA1-225ENST00000586385 TMEM67Q5HYA8 995 aa14.01□□□□□ -0.17
BRCA1-225ENST00000586385 NFRKBQ6P4R8 1299 aa14.01□□□□□ -0.17
BRCA1-225ENST00000586385 CCDC62Q6P9F0 684 aa14.01□□□□□ -0.17
BRCA1-225ENST00000586385 RNF207Q6ZRF8 634 aa14.01□□□□□ -0.17
BRCA1-225ENST00000586385 ZNF589Q86UQ0 364 aaPredicted RBP14.01□□□□□ -0.17
BRCA1-225ENST00000586385 TBC1D10CQ8IV04 446 aa14.01□□□□□ -0.17
BRCA1-225ENST00000586385 CPVLQ9H3G5 476 aa14.01□□□□□ -0.17
BRCA1-225ENST00000586385 HELLSQ9NRZ9 838 aa14.01□□□□□ -0.17
BRCA1-225ENST00000586385 WDR19Q8NEZ3 1342 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms