RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 ZBTB5O15062 677 aa15.32■□□□□ 0.04
ERBB2-220ENST00000584684 CDC45O75419 566 aa15.32■□□□□ 0.04
ERBB2-220ENST00000584684 C6orf222P0C671 652 aaPredicted RBP15.32■□□□□ 0.04
ERBB2-220ENST00000584684 CALML3P27482 149 aa15.32■□□□□ 0.04
ERBB2-220ENST00000584684 KCNA10Q16322 511 aa15.32■□□□□ 0.04
ERBB2-220ENST00000584684 TMEM67Q5HYA8 995 aa15.32■□□□□ 0.04
ERBB2-220ENST00000584684 IQSEC1Q6DN90 963 aa15.32■□□□□ 0.04
ERBB2-220ENST00000584684 CASC1Q6TDU7 716 aa15.32■□□□□ 0.04
ERBB2-220ENST00000584684 TLK2Q86UE8 772 aa15.32■□□□□ 0.04
ERBB2-220ENST00000584684 MCF2L2Q86YR7 1114 aa15.32■□□□□ 0.04
ERBB2-220ENST00000584684 FBXO16Q8IX29 292 aaPredicted RBP15.32■□□□□ 0.04
ERBB2-220ENST00000584684 PURBQ96QR8 312 aaKnown RBP15.32■□□□□ 0.04
ERBB2-220ENST00000584684 RIOX1Q9H6W3 641 aa15.32■□□□□ 0.04
ERBB2-220ENST00000584684 ANO2Q9NQ90 1003 aa15.32■□□□□ 0.04
ERBB2-220ENST00000584684 ATP11BQ9Y2G3 1177 aa15.32■□□□□ 0.04
ERBB2-220ENST00000584684 MRPL11Q9Y3B7 192 aaKnown RBP15.32■□□□□ 0.04
ERBB2-220ENST00000584684 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.31■□□□□ 0.04
ERBB2-220ENST00000584684 RBM47A0AV96 593 aaKnown RBP15.31■□□□□ 0.04
ERBB2-220ENST00000584684 B4DLN1 442 aa15.31■□□□□ 0.04
ERBB2-220ENST00000584684 DHX16O60231 1041 aaKnown RBP15.31■□□□□ 0.04
ERBB2-220ENST00000584684 DDAH1O94760 285 aa15.31■□□□□ 0.04
ERBB2-220ENST00000584684 MCM5P33992 734 aa15.31■□□□□ 0.04
ERBB2-220ENST00000584684 MRPL12P52815 198 aaKnown RBP15.31■□□□□ 0.04
ERBB2-220ENST00000584684 TRAF1Q13077 416 aa15.31■□□□□ 0.04
ERBB2-220ENST00000584684 CREB3L3Q68CJ9 461 aa15.31■□□□□ 0.04
ERBB2-220ENST00000584684 ANKRD33Q7Z3H0 272 aa15.31■□□□□ 0.04
ERBB2-220ENST00000584684 CATIPQ7Z7H3 387 aa15.31■□□□□ 0.04
ERBB2-220ENST00000584684 TMEM87BQ96K49 555 aa15.31■□□□□ 0.04
ERBB2-220ENST00000584684 TOX2Q96NM4 488 aa15.31■□□□□ 0.04
ERBB2-220ENST00000584684 AMNQ9BXJ7 453 aa15.31■□□□□ 0.04
ERBB2-220ENST00000584684 LY9Q9HBG7 655 aa15.31■□□□□ 0.04
ERBB2-220ENST00000584684 SENP2Q9HC62 589 aa15.31■□□□□ 0.04
ERBB2-220ENST00000584684 PDLIM7Q9NR12 457 aa15.31■□□□□ 0.04
ERBB2-220ENST00000584684 PRKAG2Q9UGJ0 569 aa15.31■□□□□ 0.04
ERBB2-220ENST00000584684 DDX49Q9Y6V7 483 aaKnown RBP15.31■□□□□ 0.04
ERBB2-220ENST00000584684 PRC1O43663 620 aa15.3■□□□□ 0.04
ERBB2-220ENST00000584684 ASGR1P07306 291 aa15.3■□□□□ 0.04
ERBB2-220ENST00000584684 SMPD1P17405 629 aa15.3■□□□□ 0.04
ERBB2-220ENST00000584684 SLC35G1Q2M3R5 365 aa15.3■□□□□ 0.04
ERBB2-220ENST00000584684 DUSP28Q4G0W2 176 aa15.3■□□□□ 0.04
ERBB2-220ENST00000584684 RNF20Q5VTR2 975 aa15.3■□□□□ 0.04
ERBB2-220ENST00000584684 MROH7Q68CQ1 1323 aa15.3■□□□□ 0.04
ERBB2-220ENST00000584684 SAMD3Q8N6K7 520 aa15.3■□□□□ 0.04
ERBB2-220ENST00000584684 SYTL5Q8TDW5 730 aaPredicted RBP15.3■□□□□ 0.04
ERBB2-220ENST00000584684 GLT1D1Q96MS3 346 aa15.3■□□□□ 0.04
ERBB2-220ENST00000584684 STARD7Q9NQZ5 370 aa15.3■□□□□ 0.04
ERBB2-220ENST00000584684 PDGFCQ9NRA1 345 aa15.3■□□□□ 0.04
ERBB2-220ENST00000584684 MAP3K20Q9NYL2 800 aaKnown RBP15.3■□□□□ 0.04
ERBB2-220ENST00000584684 SH2B2O14492 632 aaPredicted RBP15.29■□□□□ 0.04
ERBB2-220ENST00000584684 OPLAHO14841 1288 aa15.29■□□□□ 0.04
ERBB2-220ENST00000584684 PPP1R11O60927 126 aaPredicted RBP15.29■□□□□ 0.04
ERBB2-220ENST00000584684 CABYRO75952 493 aa15.29■□□□□ 0.04
ERBB2-220ENST00000584684 LIFRP42702 1097 aa15.29■□□□□ 0.04
ERBB2-220ENST00000584684 HSD17B4P51659 736 aa15.29■□□□□ 0.04
ERBB2-220ENST00000584684 TLE2Q04725 743 aa15.29■□□□□ 0.04
ERBB2-220ENST00000584684 PDE4DQ08499 809 aa15.29■□□□□ 0.04
ERBB2-220ENST00000584684 FSCN1Q16658 493 aaKnown RBP15.29■□□□□ 0.04
ERBB2-220ENST00000584684 GNASQ5JWF2 1037 aa15.29■□□□□ 0.04
ERBB2-220ENST00000584684 EEPD1Q7L9B9 569 aa15.29■□□□□ 0.04
ERBB2-220ENST00000584684 CHST3Q7LGC8 479 aa15.29■□□□□ 0.04
ERBB2-220ENST00000584684 TDHQ8IZJ6 230 aa15.29■□□□□ 0.04
ERBB2-220ENST00000584684 ZNF654Q8IZM8 581 aa15.29■□□□□ 0.04
ERBB2-220ENST00000584684 TMTC2Q8N394 836 aa15.29■□□□□ 0.04
ERBB2-220ENST00000584684 KIAA1217Q5T5P2 1943 aa15.29■□□□□ 0.04
ERBB2-220ENST00000584684 BAZ2BQ9UIF8 2168 aaKnown RBP15.28■□□□□ 0.04
ERBB2-220ENST00000584684 A0A0U1RQG5 324 aaPredicted RBP15.28■□□□□ 0.04
ERBB2-220ENST00000584684 KIAA0355O15063 1070 aa15.28■□□□□ 0.04
ERBB2-220ENST00000584684 NKRFO15226 690 aaKnown RBP eCLIP15.28■□□□□ 0.04
ERBB2-220ENST00000584684 CYTH3O43739 400 aa15.28■□□□□ 0.04
ERBB2-220ENST00000584684 NEFLP07196 543 aa15.28■□□□□ 0.04
ERBB2-220ENST00000584684 CLTBP09497 229 aa15.28■□□□□ 0.04
ERBB2-220ENST00000584684 SMARCA1P28370 1054 aa15.28■□□□□ 0.04
ERBB2-220ENST00000584684 KIF5BP33176 963 aa15.28■□□□□ 0.04
ERBB2-220ENST00000584684 IRX5P78411 483 aaPredicted RBP15.28■□□□□ 0.04
ERBB2-220ENST00000584684 TSGA10IPQ3SY00 556 aa15.28■□□□□ 0.04
ERBB2-220ENST00000584684 NOL8Q76FK4 1167 aaKnown RBP15.28■□□□□ 0.04
ERBB2-220ENST00000584684 NSUN6Q8TEA1 469 aaKnown RBP15.28■□□□□ 0.04
ERBB2-220ENST00000584684 SCFD2Q8WU76 684 aa15.28■□□□□ 0.04
ERBB2-220ENST00000584684 IWS1Q96ST2 819 aa15.28■□□□□ 0.04
ERBB2-220ENST00000584684 LBHD1Q9BQE6 289 aaPredicted RBP15.28■□□□□ 0.04
ERBB2-220ENST00000584684 SPZ1Q9BXG8 430 aa15.28■□□□□ 0.04
ERBB2-220ENST00000584684 SEZ6LQ9BYH1 1024 aa15.28■□□□□ 0.04
ERBB2-220ENST00000584684 WDR11Q9BZH6 1224 aa15.28■□□□□ 0.04
ERBB2-220ENST00000584684 UBE2OQ9C0C9 1292 aaKnown RBP15.28■□□□□ 0.04
ERBB2-220ENST00000584684 AP5M1Q9H0R1 490 aa15.28■□□□□ 0.04
ERBB2-220ENST00000584684 VAT1LQ9HCJ6 419 aa15.28■□□□□ 0.04
ERBB2-220ENST00000584684 COL20A1Q9P218 1284 aa15.28■□□□□ 0.04
ERBB2-220ENST00000584684 LAMA2P24043 3122 aaKnown RBP15.28■□□□□ 0.04
ERBB2-220ENST00000584684 PNMA6FA0A0J9YX94 578 aa15.27■□□□□ 0.04
ERBB2-220ENST00000584684 ZEB2O60315 1214 aa15.27■□□□□ 0.04
ERBB2-220ENST00000584684 CDK7P50613 346 aa15.27■□□□□ 0.04
ERBB2-220ENST00000584684 MDM2Q00987 491 aaPredicted RBP15.27■□□□□ 0.04
ERBB2-220ENST00000584684 PPP2R5BQ15173 497 aa15.27■□□□□ 0.04
ERBB2-220ENST00000584684 LRIT3Q3SXY7 679 aa15.27■□□□□ 0.04
ERBB2-220ENST00000584684 SGMS1Q86VZ5 419 aa15.27■□□□□ 0.04
ERBB2-220ENST00000584684 SLC43A3Q8NBI5 491 aa15.27■□□□□ 0.04
ERBB2-220ENST00000584684 CTCFLQ8NI51 663 aaPredicted RBP15.27■□□□□ 0.04
ERBB2-220ENST00000584684 LZTS2Q9BRK4 669 aa15.27■□□□□ 0.04
ERBB2-220ENST00000584684 PCDHA1Q9Y5I3 950 aa15.27■□□□□ 0.04
ERBB2-220ENST00000584684 SCN10AQ9Y5Y9 1956 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms