RNA–Protein interactions for RNA: ENST00000584099.1

ERBB2-217, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-217ENST00000584099 ITGB8P26012 769 aa15.16■□□□□ 0.02
ERBB2-217ENST00000584099 RPS6P62753 249 aaKnown RBP15.16■□□□□ 0.02
ERBB2-217ENST00000584099 TRAF1Q13077 416 aa15.16■□□□□ 0.02
ERBB2-217ENST00000584099 BRDTQ58F21 947 aaPredicted RBP15.16■□□□□ 0.02
ERBB2-217ENST00000584099 SAMD3Q8N6K7 520 aa15.16■□□□□ 0.02
ERBB2-217ENST00000584099 VTI1AQ96AJ9 217 aa15.16■□□□□ 0.02
ERBB2-217ENST00000584099 POLR3EQ9NVU0 708 aa15.16■□□□□ 0.02
ERBB2-217ENST00000584099 MAP3K20Q9NYL2 800 aaKnown RBP15.16■□□□□ 0.02
ERBB2-217ENST00000584099 U3KPZ7 1027 aaPredicted RBP15.16■□□□□ 0.02
ERBB2-217ENST00000584099 TNKSO95271 1327 aa15.16■□□□□ 0.02
ERBB2-217ENST00000584099 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.15■□□□□ 0.02
ERBB2-217ENST00000584099 B4E1Z4 1266 aa15.15■□□□□ 0.02
ERBB2-217ENST00000584099 DYNC1LI2O43237 492 aaPredicted RBP15.15■□□□□ 0.02
ERBB2-217ENST00000584099 PARP1P09874 1014 aaKnown RBP15.15■□□□□ 0.02
ERBB2-217ENST00000584099 CPT1AP50416 773 aa15.15■□□□□ 0.02
ERBB2-217ENST00000584099 GHRHRQ02643 423 aa15.15■□□□□ 0.02
ERBB2-217ENST00000584099 TRDNQ13061 729 aa15.15■□□□□ 0.02
ERBB2-217ENST00000584099 PPIGQ13427 754 aaKnown RBP eCLIP15.15■□□□□ 0.024e-10■□□□□ 9.7
ERBB2-217ENST00000584099 C9orf50Q5SZB4 431 aa15.15■□□□□ 0.02
ERBB2-217ENST00000584099 KIAA1211Q6ZU35 1233 aa15.15■□□□□ 0.02
ERBB2-217ENST00000584099 FBXO16Q8IX29 292 aaPredicted RBP15.15■□□□□ 0.02
ERBB2-217ENST00000584099 TMEM199Q8N511 208 aa15.15■□□□□ 0.02
ERBB2-217ENST00000584099 SCFD2Q8WU76 684 aa15.15■□□□□ 0.02
ERBB2-217ENST00000584099 IWS1Q96ST2 819 aa15.15■□□□□ 0.02
ERBB2-217ENST00000584099 WDR11Q9BZH6 1224 aa15.15■□□□□ 0.02
ERBB2-217ENST00000584099 SMCHD1A6NHR9 2005 aa15.15■□□□□ 0.02
ERBB2-217ENST00000584099 COL6A3P12111 3177 aa15.15■□□□□ 0.02
ERBB2-217ENST00000584099 GSPT1P15170 499 aaKnown RBP15.14■□□□□ 0.01
ERBB2-217ENST00000584099 PDE4AP27815 886 aa15.14■□□□□ 0.01
ERBB2-217ENST00000584099 PDE4DQ08499 809 aa15.14■□□□□ 0.01
ERBB2-217ENST00000584099 ITGA7Q13683 1181 aa15.14■□□□□ 0.01
ERBB2-217ENST00000584099 CDC37Q16543 378 aaPredicted RBP15.14■□□□□ 0.01
ERBB2-217ENST00000584099 IFIT1BQ5T764 474 aaKnown RBP15.14■□□□□ 0.01
ERBB2-217ENST00000584099 ZNF697Q5TEC3 545 aa15.14■□□□□ 0.01
ERBB2-217ENST00000584099 CXCL17Q6UXB2 119 aa15.14■□□□□ 0.01
ERBB2-217ENST00000584099 SLC30A10Q6XR72 485 aa15.14■□□□□ 0.01
ERBB2-217ENST00000584099 CHMP4CQ96CF2 233 aa15.14■□□□□ 0.01
ERBB2-217ENST00000584099 ZKSCAN3Q9BRR0 538 aa15.14■□□□□ 0.01
ERBB2-217ENST00000584099 PDGFCQ9NRA1 345 aa15.14■□□□□ 0.01
ERBB2-217ENST00000584099 MRPL11Q9Y3B7 192 aaKnown RBP15.14■□□□□ 0.01
ERBB2-217ENST00000584099 A0A0C4DFX4 3053 aa15.14■□□□□ 0.01
ERBB2-217ENST00000584099 LTBP2Q14767 1821 aa15.13■□□□□ 0.01
ERBB2-217ENST00000584099 A6NJR5 290 aa15.13■□□□□ 0.01
ERBB2-217ENST00000584099 SUPT20HL2P0C7V6 817 aa15.13■□□□□ 0.01
ERBB2-217ENST00000584099 CHMLP26374 656 aa15.13■□□□□ 0.01
ERBB2-217ENST00000584099 CALML3P27482 149 aa15.13■□□□□ 0.01
ERBB2-217ENST00000584099 PSRC1Q6PGN9 363 aaPredicted RBP15.13■□□□□ 0.01
ERBB2-217ENST00000584099 ADGRF4Q8IZF3 695 aa15.13■□□□□ 0.01
ERBB2-217ENST00000584099 NSUN6Q8TEA1 469 aaKnown RBP15.13■□□□□ 0.01
ERBB2-217ENST00000584099 RNPC3Q96LT9 517 aaKnown RBP15.13■□□□□ 0.01
ERBB2-217ENST00000584099 MTA3Q9BTC8 594 aa15.13■□□□□ 0.01
ERBB2-217ENST00000584099 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.12■□□□□ 0.01
ERBB2-217ENST00000584099 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.12■□□□□ 0.01
ERBB2-217ENST00000584099 GOLGA8HP0CJ92 632 aa15.12■□□□□ 0.01
ERBB2-217ENST00000584099 BEX3Q00994 111 aa15.12■□□□□ 0.01
ERBB2-217ENST00000584099 PTPN11Q06124 597 aaPredicted RBP15.12■□□□□ 0.01
ERBB2-217ENST00000584099 SART3Q15020 963 aaKnown RBP15.12■□□□□ 0.01
ERBB2-217ENST00000584099 PPP2R5BQ15173 497 aa15.12■□□□□ 0.01
ERBB2-217ENST00000584099 SEC23AQ15436 765 aa15.12■□□□□ 0.01
ERBB2-217ENST00000584099 RASIP1Q5U651 963 aa15.12■□□□□ 0.01
ERBB2-217ENST00000584099 Q7L0L9 218 aa15.12■□□□□ 0.01
ERBB2-217ENST00000584099 EEPD1Q7L9B9 569 aa15.12■□□□□ 0.01
ERBB2-217ENST00000584099 MTMR8Q96EF0 704 aa15.12■□□□□ 0.01
ERBB2-217ENST00000584099 AMNQ9BXJ7 453 aa15.12■□□□□ 0.01
ERBB2-217ENST00000584099 UBA5Q9GZZ9 404 aa15.12■□□□□ 0.01
ERBB2-217ENST00000584099 SGSM2O43147 1006 aa15.11■□□□□ 0.01
ERBB2-217ENST00000584099 EPHB4P54760 987 aa15.11■□□□□ 0.01
ERBB2-217ENST00000584099 IRX5P78411 483 aaPredicted RBP15.11■□□□□ 0.01
ERBB2-217ENST00000584099 PURAQ00577 322 aaKnown RBP15.11■□□□□ 0.01
ERBB2-217ENST00000584099 TTLL4Q14679 1199 aa15.11■□□□□ 0.01
ERBB2-217ENST00000584099 FBXO11Q86XK2 927 aa15.11■□□□□ 0.01
ERBB2-217ENST00000584099 SYTL5Q8TDW5 730 aaPredicted RBP15.11■□□□□ 0.01
ERBB2-217ENST00000584099 PURBQ96QR8 312 aaKnown RBP15.11■□□□□ 0.01
ERBB2-217ENST00000584099 MTIF3Q9H2K0 278 aaKnown RBP15.11■□□□□ 0.01
ERBB2-217ENST00000584099 JMJD4Q9H9V9 463 aa15.11■□□□□ 0.01
ERBB2-217ENST00000584099 GPHNQ9NQX3 736 aaPredicted RBP15.11■□□□□ 0.01
ERBB2-217ENST00000584099 GRIN2DO15399 1336 aa15.11■□□□□ 0.01
ERBB2-217ENST00000584099 CUL9Q8IWT3 2517 aa15.1■□□□□ 0.01
ERBB2-217ENST00000584099 ERICH2A1L162 156 aa15.1■□□□□ 0.01
ERBB2-217ENST00000584099 PALM3A6NDB9 673 aaPredicted RBP15.1■□□□□ 0.01
ERBB2-217ENST00000584099 CENPBP07199 599 aaPredicted RBP15.1■□□□□ 0.01
ERBB2-217ENST00000584099 PFKMP08237 780 aa15.1■□□□□ 0.01
ERBB2-217ENST00000584099 CYP21A2P08686 494 aa15.1■□□□□ 0.01
ERBB2-217ENST00000584099 QRICH1Q2TAL8 776 aa15.1■□□□□ 0.01
ERBB2-217ENST00000584099 USH1GQ495M9 461 aa15.1■□□□□ 0.01
ERBB2-217ENST00000584099 NFRKBQ6P4R8 1299 aa15.1■□□□□ 0.01
ERBB2-217ENST00000584099 RALYLQ86SE5 291 aaKnown RBP15.1■□□□□ 0.01
ERBB2-217ENST00000584099 SLC17A8Q8NDX2 589 aa15.1■□□□□ 0.01
ERBB2-217ENST00000584099 NCOA7Q8NI08 942 aa15.1■□□□□ 0.01
ERBB2-217ENST00000584099 MAP4K1Q92918 833 aa15.1■□□□□ 0.01
ERBB2-217ENST00000584099 GUCD1Q96NT3 240 aa15.1■□□□□ 0.01
ERBB2-217ENST00000584099 MAP3K14Q99558 947 aa15.1■□□□□ 0.01
ERBB2-217ENST00000584099 MTG1Q9BT17 334 aaPredicted RBP15.1■□□□□ 0.01
ERBB2-217ENST00000584099 IL25Q9H293 177 aa15.1■□□□□ 0.01
ERBB2-217ENST00000584099 ALDH8A1Q9H2A2 487 aaPredicted RBP15.1■□□□□ 0.01
ERBB2-217ENST00000584099 SEMA6BQ9H3T3 888 aa15.1■□□□□ 0.01
ERBB2-217ENST00000584099 HIPK3Q9H422 1215 aa15.1■□□□□ 0.01
ERBB2-217ENST00000584099 KLRF2D3W0D1 207 aa15.09■□□□□ 0.01
ERBB2-217ENST00000584099 ZBTB5O15062 677 aa15.09■□□□□ 0.01
ERBB2-217ENST00000584099 EIF3JO75822 258 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms