RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 PPP6R2O75170 966 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 PCCAP05165 728 aaPredicted RBP8.37□□□□□ -1.07
TVP23C-208ENST00000581273 NEFHP12036 1026 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 BMP8BP34820 402 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 SYKP43405 635 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 SMTNP53814 917 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 SLC8A3P57103 927 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 ICA1Q05084 483 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 G3BP1Q13283 466 aaKnown RBP eCLIP8.37□□□□□ -1.07
TVP23C-208ENST00000581273 NMIQ13287 307 aaPredicted RBP8.37□□□□□ -1.07
TVP23C-208ENST00000581273 TJAP1Q5JTD0 557 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 DACT2Q5SW24 774 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 SPRYD7Q5W111 196 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 DHX32Q7L7V1 743 aaKnown RBP8.37□□□□□ -1.07
TVP23C-208ENST00000581273 UBE3BQ7Z3V4 1068 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 EGFL6Q8IUX8 553 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 TMEM139Q8IV31 216 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 KIAA0825Q8IV33 1275 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 FAM177A1Q8N128 213 aaPredicted RBP8.37□□□□□ -1.07
TVP23C-208ENST00000581273 FBXL16Q8N461 479 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 LINC00301Q8NCQ3 95 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 ENOX1Q8TC92 643 aaKnown RBP8.37□□□□□ -1.07
TVP23C-208ENST00000581273 COG1Q8WTW3 980 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 DDX12PQ92771 950 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 SLC10A4Q96EP9 437 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 WDR24Q96S15 920 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 CDC5LQ99459 802 aaKnown RBP8.37□□□□□ -1.07
TVP23C-208ENST00000581273 MYO6Q9UM54 1294 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 MINPP1Q9UNW1 487 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 HCN4Q9Y3Q4 1203 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 NCOR1O75376 2440 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 PATL2C9JE40 543 aaKnown RBP8.36□□□□□ -1.07
TVP23C-208ENST00000581273 PRPF6O94906 941 aaKnown RBP8.36□□□□□ -1.07
TVP23C-208ENST00000581273 EPB41P11171 864 aaKnown RBP8.36□□□□□ -1.07
TVP23C-208ENST00000581273 ERCC5P28715 1186 aaPredicted RBP8.36□□□□□ -1.07
TVP23C-208ENST00000581273 CCT5P48643 541 aa8.36□□□□□ -1.07
TVP23C-208ENST00000581273 LIG3P49916 1009 aa8.36□□□□□ -1.07
TVP23C-208ENST00000581273 USP14P54578 494 aa8.36□□□□□ -1.07
TVP23C-208ENST00000581273 CTSWP56202 376 aa8.36□□□□□ -1.07
TVP23C-208ENST00000581273 GTF2IP78347 998 aa8.36□□□□□ -1.07
TVP23C-208ENST00000581273 SKOR1P84550 965 aa8.36□□□□□ -1.07
TVP23C-208ENST00000581273 LMNB2Q03252 620 aa8.36□□□□□ -1.07
TVP23C-208ENST00000581273 CCDC102BQ68D86 513 aa8.36□□□□□ -1.07
TVP23C-208ENST00000581273 Q6ZUG5 572 aa8.36□□□□□ -1.07
TVP23C-208ENST00000581273 G2E3Q7L622 706 aa8.36□□□□□ -1.07
TVP23C-208ENST00000581273 RASGRP2Q7LDG7 609 aa8.36□□□□□ -1.07
TVP23C-208ENST00000581273 TXNRD3Q86VQ6 643 aa8.36□□□□□ -1.07
TVP23C-208ENST00000581273 APOBEC3FQ8IUX4 373 aaKnown RBP8.36□□□□□ -1.07
TVP23C-208ENST00000581273 ARFGAP2Q8N6H7 521 aa8.36□□□□□ -1.07
TVP23C-208ENST00000581273 NSUN7Q8NE18 718 aaKnown RBP8.36□□□□□ -1.07
TVP23C-208ENST00000581273 MIEF2Q96C03 454 aa8.36□□□□□ -1.07
TVP23C-208ENST00000581273 CLMNQ96JQ2 1002 aa8.36□□□□□ -1.07
TVP23C-208ENST00000581273 P2RX7Q99572 595 aaKnown RBP8.36□□□□□ -1.07
TVP23C-208ENST00000581273 CDX2Q99626 313 aaPredicted RBP8.36□□□□□ -1.07
TVP23C-208ENST00000581273 GREM2Q9H772 168 aa8.36□□□□□ -1.07
TVP23C-208ENST00000581273 MCM8Q9UJA3 840 aa8.36□□□□□ -1.07
TVP23C-208ENST00000581273 ODF2LQ9ULJ1 636 aa8.36□□□□□ -1.07
TVP23C-208ENST00000581273 ZMYND8Q9ULU4 1186 aaPredicted RBP8.36□□□□□ -1.07
TVP23C-208ENST00000581273 HPCAL4Q9UM19 191 aa8.36□□□□□ -1.07
TVP23C-208ENST00000581273 MAP3K2Q9Y2U5 619 aa8.36□□□□□ -1.07
TVP23C-208ENST00000581273 ZNF646O15015 1829 aaPredicted RBP8.36□□□□□ -1.07
TVP23C-208ENST00000581273 ITIH6Q6UXX5 1313 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 GOLGA6BA6NDN3 693 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 F8W031 263 aaPredicted RBP8.35□□□□□ -1.07
TVP23C-208ENST00000581273 MEFVO15553 781 aaPredicted RBP8.35□□□□□ -1.07
TVP23C-208ENST00000581273 JAK2O60674 1132 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 CDKL5O76039 1030 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 DDX58O95786 925 aaKnown RBP8.35□□□□□ -1.07
TVP23C-208ENST00000581273 KLRK1P26718 216 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 IRAK1P51617 712 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 NDUFA8P51970 172 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 CEBPZQ03701 1054 aaKnown RBP8.35□□□□□ -1.07
TVP23C-208ENST00000581273 SPAG1Q07617 926 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 STK3Q13188 491 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 NNTQ13423 1086 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 ZNF569Q5MCW4 686 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 WLSQ5T9L3 541 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 STRIP1Q5VSL9 837 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 ANO1Q5XXA6 986 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 RCSD1Q6JBY9 416 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 CPLX2Q6PUV4 134 aaKnown RBP8.35□□□□□ -1.07
TVP23C-208ENST00000581273 AACSQ86V21 672 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 TDHQ8IZJ6 230 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 C1orf131Q8NDD1 294 aaKnown RBP8.35□□□□□ -1.07
TVP23C-208ENST00000581273 BCAS4Q8TDM0 211 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 TCP11Q8WWU5 503 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 RSRC1Q96IZ7 334 aaKnown RBP8.35□□□□□ -1.07
TVP23C-208ENST00000581273 C8orf76Q96K31 380 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 FAM210AQ96ND0 272 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 EPAS1Q99814 870 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 METTL22Q9BUU2 404 aaPredicted RBP8.35□□□□□ -1.07
TVP23C-208ENST00000581273 TRIM6Q9C030 488 aaPredicted RBP8.35□□□□□ -1.07
TVP23C-208ENST00000581273 PUF60Q9UHX1 559 aaKnown RBP8.35□□□□□ -1.07
TVP23C-208ENST00000581273 ADGRG1Q9Y653 693 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 CAPN7Q9Y6W3 813 aa8.35□□□□□ -1.07
TVP23C-208ENST00000581273 MYO3BQ8WXR4 1341 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 ECM29Q5VYK3 1845 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 A0A1B0GVL5 298 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 CLRN2A0PK11 232 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 MANSC4A6NHS7 340 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms