RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 ARMCX6Q7L4S7 300 aa6.35□□□□□ -1.39
PRPF8-211ENST00000574728 MFSD2AQ8NA29 543 aa6.35□□□□□ -1.39
PRPF8-211ENST00000574728 SREK1Q8WXA9 508 aaKnown RBP6.35□□□□□ -1.39
PRPF8-211ENST00000574728 ATG3Q9NT62 314 aa6.35□□□□□ -1.39
PRPF8-211ENST00000574728 ASAP1Q9ULH1 1129 aa6.35□□□□□ -1.39
PRPF8-211ENST00000574728 LRP5O75197 1615 aa6.35□□□□□ -1.39
PRPF8-211ENST00000574728 PALLDQ8WX93 1383 aa6.34□□□□□ -1.39
PRPF8-211ENST00000574728 PNPLA7Q6ZV29 1317 aa6.34□□□□□ -1.39
PRPF8-211ENST00000574728 MEIS3P2A8K0S8 358 aa6.34□□□□□ -1.39
PRPF8-211ENST00000574728 GSC2O15499 205 aa6.34□□□□□ -1.39
PRPF8-211ENST00000574728 ITPK1Q13572 414 aa6.34□□□□□ -1.39
PRPF8-211ENST00000574728 OVOS1Q6IE37 1185 aa6.34□□□□□ -1.39
PRPF8-211ENST00000574728 MCF2L2Q86YR7 1114 aa6.34□□□□□ -1.39
PRPF8-211ENST00000574728 SLFN12Q8IYM2 578 aa6.34□□□□□ -1.39
PRPF8-211ENST00000574728 RBBP8NLQ8NC74 664 aaPredicted RBP6.34□□□□□ -1.39
PRPF8-211ENST00000574728 OR6P1Q8NGX9 317 aa6.34□□□□□ -1.39
PRPF8-211ENST00000574728 TMEM40Q8WWA1 233 aa6.34□□□□□ -1.39
PRPF8-211ENST00000574728 SYTL4Q96C24 671 aaPredicted RBP6.34□□□□□ -1.39
PRPF8-211ENST00000574728 TBC1D32Q96NH3 1257 aa6.34□□□□□ -1.39
PRPF8-211ENST00000574728 C1GALT1Q9NS00 363 aa6.34□□□□□ -1.39
PRPF8-211ENST00000574728 CEMIPQ8WUJ3 1361 aa6.33□□□□□ -1.4
PRPF8-211ENST00000574728 SLC22A31A6NKX4 558 aa6.33□□□□□ -1.4
PRPF8-211ENST00000574728 UPK3BL1B0FP48 263 aa6.33□□□□□ -1.4
PRPF8-211ENST00000574728 CHURC1-FNTBB4DL54 471 aa6.33□□□□□ -1.4
PRPF8-211ENST00000574728 UPK3BL2E5RIL1 263 aa6.33□□□□□ -1.4
PRPF8-211ENST00000574728 RNMTO43148 476 aaKnown RBP6.33□□□□□ -1.4
PRPF8-211ENST00000574728 ATP2B1P20020 1258 aa6.33□□□□□ -1.4
PRPF8-211ENST00000574728 ZEB1P37275 1124 aaPredicted RBP6.33□□□□□ -1.4
PRPF8-211ENST00000574728 CDK5R2Q13319 367 aa6.33□□□□□ -1.4
PRPF8-211ENST00000574728 RSPO4Q2I0M5 234 aaPredicted RBP6.33□□□□□ -1.4
PRPF8-211ENST00000574728 ARSHQ5FYA8 562 aa6.33□□□□□ -1.4
PRPF8-211ENST00000574728 NKAPLQ5M9Q1 402 aa6.33□□□□□ -1.4
PRPF8-211ENST00000574728 RNF43Q68DV7 783 aa6.33□□□□□ -1.4
PRPF8-211ENST00000574728 NLRC3Q7RTR2 1065 aa6.33□□□□□ -1.4
PRPF8-211ENST00000574728 LINC00116Q8NCU8 138 aa6.33□□□□□ -1.4
PRPF8-211ENST00000574728 IL17REQ8NFR9 667 aa6.33□□□□□ -1.4
PRPF8-211ENST00000574728 SHDQ96IW2 340 aa6.33□□□□□ -1.4
PRPF8-211ENST00000574728 PSMG3-AS1Q96PY0 264 aa6.33□□□□□ -1.4
PRPF8-211ENST00000574728 PLEKHF1Q96S99 279 aa6.33□□□□□ -1.4
PRPF8-211ENST00000574728 DPH2Q9BQC3 489 aaPredicted RBP6.33□□□□□ -1.4
PRPF8-211ENST00000574728 ITGB4P16144 1822 aa6.33□□□□□ -1.4
PRPF8-211ENST00000574728 KCPQ6ZWJ8 1503 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 DNAJA2O60884 412 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 RAG1P15918 1043 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 PRKAR2BP31323 418 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 GIPRP48546 466 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 RALBP1Q15311 655 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 CDCP2Q5VXM1 449 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 SMIM5Q71RC9 77 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 ZAR1Q86SH2 424 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 LSRQ86X29 649 aaPredicted RBP6.32□□□□□ -1.4
PRPF8-211ENST00000574728 PHACTR4Q8IZ21 702 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 XAGE3Q8WTP9 111 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 CYB5D2Q8WUJ1 264 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 ANAPC16Q96DE5 110 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 ATG4CQ96DT6 458 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 MFSD14AQ96MC6 490 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 MIPEPQ99797 713 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 TM9SF2Q99805 663 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 DBNDD2Q9BQY9 259 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 ANTXR1Q9H6X2 564 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 PRKRIP1Q9H875 184 aaPredicted RBP6.32□□□□□ -1.4
PRPF8-211ENST00000574728 CNNM2Q9H8M5 875 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 PRDM10Q9NQV6 1147 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 TMOD3Q9NYL9 352 aa6.32□□□□□ -1.4
PRPF8-211ENST00000574728 CCNL1Q9UK58 526 aaPredicted RBP6.32□□□□□ -1.4
PRPF8-211ENST00000574728 COL24A1Q17RW2 1714 aa6.31□□□□□ -1.4
PRPF8-211ENST00000574728 U2SURPO15042 1029 aaKnown RBP6.31□□□□□ -1.4
PRPF8-211ENST00000574728 DYRK3O43781 588 aa6.31□□□□□ -1.4
PRPF8-211ENST00000574728 ZBTB7AO95365 584 aa6.31□□□□□ -1.4
PRPF8-211ENST00000574728 IGLV1-40P01703 118 aa6.31□□□□□ -1.4
PRPF8-211ENST00000574728 HSP90AB1P08238 724 aaKnown RBP6.31□□□□□ -1.4
PRPF8-211ENST00000574728 NME1P15531 152 aaKnown RBP6.31□□□□□ -1.4
PRPF8-211ENST00000574728 FSTP19883 344 aa6.31□□□□□ -1.4
PRPF8-211ENST00000574728 CYP27A1Q02318 531 aa6.31□□□□□ -1.4
PRPF8-211ENST00000574728 NFIAQ12857 509 aa6.31□□□□□ -1.4
PRPF8-211ENST00000574728 SLC51AQ86UW1 340 aa6.31□□□□□ -1.4
PRPF8-211ENST00000574728 COL23A1Q86Y22 540 aaPredicted RBP6.31□□□□□ -1.4
PRPF8-211ENST00000574728 FBXL6Q8N531 539 aa6.31□□□□□ -1.4
PRPF8-211ENST00000574728 TOP6BLQ8N6T0 577 aa6.31□□□□□ -1.4
PRPF8-211ENST00000574728 SMARCC1Q92922 1105 aaPredicted RBP6.31□□□□□ -1.4
PRPF8-211ENST00000574728 CCDC74BQ96LY2 380 aa6.31□□□□□ -1.4
PRPF8-211ENST00000574728 SLC52A2Q9HAB3 445 aa6.31□□□□□ -1.4
PRPF8-211ENST00000574728 STK32BQ9NY57 414 aa6.31□□□□□ -1.4
PRPF8-211ENST00000574728 MRVI1Q9Y6F6 885 aa6.31□□□□□ -1.4
PRPF8-211ENST00000574728 TUBGCP6Q96RT7 1819 aa6.31□□□□□ -1.4
PRPF8-211ENST00000574728 CICQ96RK0 1608 aaPredicted RBP6.31□□□□□ -1.4
PRPF8-211ENST00000574728 MAP3K5Q99683 1374 aa6.31□□□□□ -1.4
PRPF8-211ENST00000574728 MYBBP1AQ9BQG0 1328 aaKnown RBP6.3□□□□□ -1.4
PRPF8-211ENST00000574728 ZNF831Q5JPB2 1677 aa6.3□□□□□ -1.4
PRPF8-211ENST00000574728 TNFRSF10CO14798 259 aa6.3□□□□□ -1.4
PRPF8-211ENST00000574728 STK10O94804 968 aaKnown RBP6.3□□□□□ -1.4
PRPF8-211ENST00000574728 FAM87AP0C7U9 286 aa6.3□□□□□ -1.4
PRPF8-211ENST00000574728 U2AF1L5P0DN76 240 aaPredicted RBP6.3□□□□□ -1.4
PRPF8-211ENST00000574728 ADMP35318 185 aa6.3□□□□□ -1.4
PRPF8-211ENST00000574728 U2AF1Q01081 240 aaKnown RBP eCLIP6.3□□□□□ -1.4
PRPF8-211ENST00000574728 CYP27C1Q4G0S4 372 aa6.3□□□□□ -1.4
PRPF8-211ENST00000574728 CCDC184Q52MB2 194 aa6.3□□□□□ -1.4
PRPF8-211ENST00000574728 INTS3Q68E01 1043 aaKnown RBP6.3□□□□□ -1.4
PRPF8-211ENST00000574728 ZNF746Q6NUN9 644 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms