RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 ZNF507Q8TCN5 953 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 ZNF148Q9UQR1 794 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 GNPTABQ3T906 1256 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 PPM1KQ8N3J5 372 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 TRIML1Q8N9V2 468 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 LRRC8CQ8TDW0 803 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 NCOA5Q9HCD5 579 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 TBK1Q9UHD2 729 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 SLC12A6Q9UHW9 1150 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 LRRD1A4D1F6 860 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 TMEM247A6NEH6 219 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 F5H423 210 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 CAVIN2O95810 425 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 SMAD1Q15797 465 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 ZNF594Q96JF6 807 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 BTG4Q9NY30 223 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 AFF4Q9UHB7 1163 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 FLOT1O75955 427 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 ZKSCAN8Q15776 578 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 TMTC3Q6ZXV5 915 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 SLF1Q9BQI6 1058 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 KRT87PA6NCN2 255 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 MYL1P05976 194 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 MARK3P27448 753 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 PRIM1P49642 420 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 PDE6CP51160 858 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 AK2P54819 239 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 RWDD4Q6NW29 188 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 INHBAP08476 426 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 BFSP1Q12934 665 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 ELF2Q15723 593 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 ARHGAP18Q8N392 663 aa17.25■□□□□ 0.35
CACNA1A-202ENST00000573710 ANP32DO95626 131 aa17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 DRC3Q9H069 523 aa17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 DONSONQ9NYP3 566 aa17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 EPRSP07814 1512 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 CREB3O43889 395 aa17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 ACCSLQ4AC99 568 aa17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 KIAA2013Q8IYS2 634 aa17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 PRPF4O43172 522 aaKnown RBP eCLIP17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 HSPD1P10809 573 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 KRIT1O00522 736 aa17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 GFAPP14136 432 aa17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 TECP42680 631 aa17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 UBXN2AP68543 259 aa17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 LRWD1Q9UFC0 647 aa17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 DHX29Q7Z478 1369 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 BRD1O95696 1058 aa17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 TCF3P15923 654 aa17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 PI4K2BQ8TCG2 481 aa17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 CCDC87Q9NVE4 849 aa17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 NKTRP30414 1462 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 APOA4P06727 396 aa17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 SLC9A1P19634 815 aa17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 CFAP221Q4G0U5 840 aa17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 THOC1Q96FV9 657 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 C1orf112Q9NSG2 853 aa17.24■□□□□ 0.35
CACNA1A-202ENST00000573710 EFCAB14O75071 495 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 TIMM10P62072 90 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 GOLGA8FQ08AF8 430 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 GOLGA8DPQ0D2H9 430 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 AARS2Q5JTZ9 985 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 EIF3CLB5ME19 914 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 SERPIND1P05546 499 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 IL2RBP14784 551 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 ITGA6P23229 1130 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 CABP7Q86V35 215 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 DYDC2Q96IM9 177 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 SPZ1Q9BXG8 430 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 WARS2Q9UGM6 360 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 DNAJC6O75061 913 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 FBXO31Q5XUX0 539 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 C1orf131Q8NDD1 294 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 CSRNP1Q96S65 589 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 LMTK3Q96Q04 1460 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 SRGAP2BP0DMP2 458 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 GTF2IP78347 998 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 POLA2Q14181 598 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 RNF207Q6ZRF8 634 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 CADPS2Q86UW7 1296 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 EIF4E1BA6NMX2 242 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 GPBP1Q86WP2 473 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 AS3MTQ9HBK9 375 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 MAGEA1P43355 309 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 LRRC47Q8N1G4 583 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 DDX28Q9NUL7 540 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 USP40Q9NVE5 1235 aa17.23■□□□□ 0.35
CACNA1A-202ENST00000573710 IGF1RP08069 1367 aa17.22■□□□□ 0.35
CACNA1A-202ENST00000573710 MRPL28Q13084 256 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-202ENST00000573710 PGBD3Q8N328 593 aa17.22■□□□□ 0.35
CACNA1A-202ENST00000573710 RAB17Q9H0T7 212 aa17.22■□□□□ 0.35
CACNA1A-202ENST00000573710 NDE1Q9NXR1 346 aa17.22■□□□□ 0.35
CACNA1A-202ENST00000573710 LZTS1Q9Y250 596 aa17.22■□□□□ 0.35
CACNA1A-202ENST00000573710 POLA1P09884 1462 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-202ENST00000573710 ANXA13P27216 316 aa17.22■□□□□ 0.35
CACNA1A-202ENST00000573710 OAS2P29728 719 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-202ENST00000573710 MYL5Q02045 173 aa17.22■□□□□ 0.35
CACNA1A-202ENST00000573710 CCDC184Q52MB2 194 aa17.22■□□□□ 0.35
CACNA1A-202ENST00000573710 TTC38Q5R3I4 469 aa17.22■□□□□ 0.35
CACNA1A-202ENST00000573710 CHMP1BQ7LBR1 199 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms