RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 ARID3AQ99856 593 aa11.07□□□□□ -0.64
NPLOC4-210ENST00000572824 DCTPP1Q9H773 170 aa11.07□□□□□ -0.64
NPLOC4-210ENST00000572824 INCENPQ9NQS7 918 aa11.07□□□□□ -0.64
NPLOC4-210ENST00000572824 ATP8A2Q9NTI2 1148 aa11.07□□□□□ -0.64
NPLOC4-210ENST00000572824 PKD2L1Q9P0L9 805 aa11.07□□□□□ -0.64
NPLOC4-210ENST00000572824 SWAP70Q9UH65 585 aa11.07□□□□□ -0.64
NPLOC4-210ENST00000572824 DDX20Q9UHI6 824 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-210ENST00000572824 CDV3Q9UKY7 258 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-210ENST00000572824 DDX49Q9Y6V7 483 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-210ENST00000572824 MINDY4BA8MYZ0 360 aa11.06□□□□□ -0.64
NPLOC4-210ENST00000572824 GPAA1O43292 621 aa11.06□□□□□ -0.64
NPLOC4-210ENST00000572824 PTGS1P23219 599 aa11.06□□□□□ -0.64
NPLOC4-210ENST00000572824 CCNA1P78396 465 aa11.06□□□□□ -0.64
NPLOC4-210ENST00000572824 LRRC47Q8N1G4 583 aaKnown RBP11.06□□□□□ -0.64
NPLOC4-210ENST00000572824 PHTF2Q8N3S3 785 aa11.06□□□□□ -0.64
NPLOC4-210ENST00000572824 KBTBD3Q8NAB2 608 aa11.06□□□□□ -0.64
NPLOC4-210ENST00000572824 CDK15Q96Q40 435 aa11.06□□□□□ -0.64
NPLOC4-210ENST00000572824 SENP6Q9GZR1 1112 aaPredicted RBP11.06□□□□□ -0.64
NPLOC4-210ENST00000572824 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.06□□□□□ -0.643e-8■■□□□ 12.8
NPLOC4-210ENST00000572824 ARHGEF10LQ9HCE6 1279 aa11.06□□□□□ -0.64
NPLOC4-210ENST00000572824 MAP4K5Q9Y4K4 846 aa11.06□□□□□ -0.64
NPLOC4-210ENST00000572824 IVNS1ABPQ9Y6Y0 642 aa11.06□□□□□ -0.64
NPLOC4-210ENST00000572824 EYSQ5T1H1 3165 aa11.06□□□□□ -0.64
NPLOC4-210ENST00000572824 PIK3CDO00329 1044 aa11.05□□□□□ -0.64
NPLOC4-210ENST00000572824 WDR46O15213 610 aaKnown RBP11.05□□□□□ -0.64
NPLOC4-210ENST00000572824 RNF113AO15541 343 aaKnown RBP11.05□□□□□ -0.64
NPLOC4-210ENST00000572824 FOXC1Q12948 553 aa11.05□□□□□ -0.64
NPLOC4-210ENST00000572824 NBPF20Q3BBV1 942 aa11.05□□□□□ -0.64
NPLOC4-210ENST00000572824 MFSD14CQ5VZR4 134 aa11.05□□□□□ -0.64
NPLOC4-210ENST00000572824 DPP9Q86TI2 863 aa11.05□□□□□ -0.64
NPLOC4-210ENST00000572824 FERMT2Q96AC1 680 aa11.05□□□□□ -0.64
NPLOC4-210ENST00000572824 MAML3Q96JK9 1138 aa11.05□□□□□ -0.64
NPLOC4-210ENST00000572824 CRBNQ96SW2 442 aa11.05□□□□□ -0.64
NPLOC4-210ENST00000572824 ZNF214Q9UL59 606 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-210ENST00000572824 RIPK3Q9Y572 518 aa11.05□□□□□ -0.64
NPLOC4-210ENST00000572824 SALL3Q9BXA9 1300 aa11.05□□□□□ -0.64
NPLOC4-210ENST00000572824 IGKV6D-41A0A0C4DH26 115 aa11.04□□□□□ -0.64
NPLOC4-210ENST00000572824 VWA5AO00534 786 aa11.04□□□□□ -0.64
NPLOC4-210ENST00000572824 ADCY6O43306 1168 aa11.04□□□□□ -0.64
NPLOC4-210ENST00000572824 RGS20O76081 388 aa11.04□□□□□ -0.64
NPLOC4-210ENST00000572824 NDUFB10O96000 172 aa11.04□□□□□ -0.64
NPLOC4-210ENST00000572824 RTP1P59025 263 aa11.04□□□□□ -0.64
NPLOC4-210ENST00000572824 TMED8Q6PL24 325 aaPredicted RBP11.04□□□□□ -0.64
NPLOC4-210ENST00000572824 VASH1Q7L8A9 365 aaPredicted RBP11.04□□□□□ -0.64
NPLOC4-210ENST00000572824 APPBP2Q92624 585 aa11.04□□□□□ -0.64
NPLOC4-210ENST00000572824 PPP1R12CQ9BZL4 782 aa11.04□□□□□ -0.64
NPLOC4-210ENST00000572824 PPP1R9AQ9ULJ8 1098 aa11.04□□□□□ -0.64
NPLOC4-210ENST00000572824 MYADML2A6NDP7 307 aa11.03□□□□□ -0.64
NPLOC4-210ENST00000572824 ESPNB1AK53 854 aa11.03□□□□□ -0.64
NPLOC4-210ENST00000572824 GDF9O60383 454 aa11.03□□□□□ -0.64
NPLOC4-210ENST00000572824 NMT2O60551 498 aa11.03□□□□□ -0.64
NPLOC4-210ENST00000572824 RRP1P56182 461 aaKnown RBP11.03□□□□□ -0.64
NPLOC4-210ENST00000572824 SNAP25P60880 206 aa11.03□□□□□ -0.64
NPLOC4-210ENST00000572824 ARID5BQ14865 1188 aa11.03□□□□□ -0.64
NPLOC4-210ENST00000572824 VPS53Q5VIR6 699 aa11.03□□□□□ -0.64
NPLOC4-210ENST00000572824 OLFML2BQ68BL8 750 aa11.03□□□□□ -0.64
NPLOC4-210ENST00000572824 SHCBP1Q8NEM2 672 aa11.03□□□□□ -0.64
NPLOC4-210ENST00000572824 LPAR1Q92633 364 aa11.03□□□□□ -0.64
NPLOC4-210ENST00000572824 CEP95Q96GE4 821 aa11.03□□□□□ -0.64
NPLOC4-210ENST00000572824 FGD4Q96M96 766 aa11.03□□□□□ -0.64
NPLOC4-210ENST00000572824 KCTD15Q96SI1 283 aaPredicted RBP11.03□□□□□ -0.64
NPLOC4-210ENST00000572824 ARPP21Q9UBL0 812 aaPredicted RBP11.03□□□□□ -0.64
NPLOC4-210ENST00000572824 ADAMTS5Q9UNA0 930 aa11.03□□□□□ -0.64
NPLOC4-210ENST00000572824 ATP11BQ9Y2G3 1177 aa11.03□□□□□ -0.64
NPLOC4-210ENST00000572824 CUL9Q8IWT3 2517 aa11.02□□□□□ -0.64
NPLOC4-210ENST00000572824 PALM3A6NDB9 673 aaPredicted RBP11.02□□□□□ -0.65
NPLOC4-210ENST00000572824 GLRX3O76003 335 aaKnown RBP11.02□□□□□ -0.65
NPLOC4-210ENST00000572824 PGK1P00558 417 aa11.02□□□□□ -0.65
NPLOC4-210ENST00000572824 ITGB8P26012 769 aa11.02□□□□□ -0.65
NPLOC4-210ENST00000572824 GRM5P41594 1212 aa11.02□□□□□ -0.65
NPLOC4-210ENST00000572824 TDO2P48775 406 aa11.02□□□□□ -0.65
NPLOC4-210ENST00000572824 TRIM60Q495X7 471 aa11.02□□□□□ -0.65
NPLOC4-210ENST00000572824 SBK1Q52WX2 424 aa11.02□□□□□ -0.65
NPLOC4-210ENST00000572824 RNF135Q8IUD6 432 aa11.02□□□□□ -0.65
NPLOC4-210ENST00000572824 RIOX2Q8IUF8 465 aa11.02□□□□□ -0.65
NPLOC4-210ENST00000572824 IFNL3Q8IZI9 196 aa11.02□□□□□ -0.65
NPLOC4-210ENST00000572824 CCDC17Q96LX7 622 aa11.02□□□□□ -0.65
NPLOC4-210ENST00000572824 MMP19Q99542 508 aa11.02□□□□□ -0.65
NPLOC4-210ENST00000572824 UBE2OQ9C0C9 1292 aaKnown RBP11.02□□□□□ -0.65
NPLOC4-210ENST00000572824 KANSL2Q9H9L4 492 aa11.02□□□□□ -0.65
NPLOC4-210ENST00000572824 HOXC10Q9NYD6 342 aa11.02□□□□□ -0.65
NPLOC4-210ENST00000572824 TFIP11Q9UBB9 837 aaKnown RBP11.02□□□□□ -0.65
NPLOC4-210ENST00000572824 UNC80Q8N2C7 3258 aa11.02□□□□□ -0.65
NPLOC4-210ENST00000572824 LAMA4Q16363 1823 aa11.01□□□□□ -0.65
NPLOC4-210ENST00000572824 F5H6K3 240 aa11.01□□□□□ -0.65
NPLOC4-210ENST00000572824 DNM1LO00429 736 aa11.01□□□□□ -0.65
NPLOC4-210ENST00000572824 APPP05067 770 aa11.01□□□□□ -0.65
NPLOC4-210ENST00000572824 BMP8BP34820 402 aa11.01□□□□□ -0.65
NPLOC4-210ENST00000572824 ADCYAP1R1P41586 468 aa11.01□□□□□ -0.65
NPLOC4-210ENST00000572824 KLRC3Q07444 240 aa11.01□□□□□ -0.65
NPLOC4-210ENST00000572824 LRRC41Q15345 812 aa11.01□□□□□ -0.65
NPLOC4-210ENST00000572824 ZNF792Q3KQV3 632 aa11.01□□□□□ -0.65
NPLOC4-210ENST00000572824 ZMYM1Q5SVZ6 1142 aa11.01□□□□□ -0.65
NPLOC4-210ENST00000572824 C9orf50Q5SZB4 431 aa11.01□□□□□ -0.65
NPLOC4-210ENST00000572824 SNRNP48Q6IEG0 339 aaKnown RBP11.01□□□□□ -0.65
NPLOC4-210ENST00000572824 TDHQ8IZJ6 230 aa11.01□□□□□ -0.65
NPLOC4-210ENST00000572824 CPXCR1Q8N123 301 aa11.01□□□□□ -0.65
NPLOC4-210ENST00000572824 MB21D1Q8N884 522 aa11.01□□□□□ -0.65
NPLOC4-210ENST00000572824 YTHDC1Q96MU7 727 aaKnown RBP11.01□□□□□ -0.65
NPLOC4-210ENST00000572824 SLF1Q9BQI6 1058 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms