RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 USP11P51784 963 aa7.44□□□□□ -1.22
SF3B3-214ENST00000572365 CDPF1Q6NVV7 123 aa7.44□□□□□ -1.22
SF3B3-214ENST00000572365 SMC1BQ8NDV3 1235 aa7.44□□□□□ -1.22
SF3B3-214ENST00000572365 CCDC74BQ96LY2 380 aa7.44□□□□□ -1.22
SF3B3-214ENST00000572365 DPH2Q9BQC3 489 aaPredicted RBP7.44□□□□□ -1.22
SF3B3-214ENST00000572365 FOXQ1Q9C009 403 aa7.44□□□□□ -1.22
SF3B3-214ENST00000572365 SEMA6CQ9H3T2 930 aa7.44□□□□□ -1.22
SF3B3-214ENST00000572365 SSU72Q9NP77 194 aaKnown RBP7.44□□□□□ -1.22
SF3B3-214ENST00000572365 ST7Q9NRC1 585 aa7.44□□□□□ -1.22
SF3B3-214ENST00000572365 KIAA1210Q9ULL0 1709 aa7.44□□□□□ -1.22
SF3B3-214ENST00000572365 SLIT3O75094 1523 aa7.43□□□□□ -1.22
SF3B3-214ENST00000572365 LRIG2O94898 1065 aa7.43□□□□□ -1.22
SF3B3-214ENST00000572365 UBOX5O94941 541 aa7.43□□□□□ -1.22
SF3B3-214ENST00000572365 GJB6O95452 261 aa7.43□□□□□ -1.22
SF3B3-214ENST00000572365 MMP10P09238 476 aa7.43□□□□□ -1.22
SF3B3-214ENST00000572365 RAB6AP20340 208 aa7.43□□□□□ -1.22
SF3B3-214ENST00000572365 POLR2BP30876 1174 aaKnown RBP7.43□□□□□ -1.22
SF3B3-214ENST00000572365 RASGRF1Q13972 1273 aa7.43□□□□□ -1.22
SF3B3-214ENST00000572365 C6orf15Q6UXA7 325 aaPredicted RBP7.43□□□□□ -1.22
SF3B3-214ENST00000572365 ARMCX6Q7L4S7 300 aa7.43□□□□□ -1.22
SF3B3-214ENST00000572365 TXNRD3Q86VQ6 643 aa7.43□□□□□ -1.22
SF3B3-214ENST00000572365 FAM178BQ8IXR5 827 aa7.43□□□□□ -1.22
SF3B3-214ENST00000572365 PHACTR4Q8IZ21 702 aa7.43□□□□□ -1.22
SF3B3-214ENST00000572365 MYRFLQ96LU7 910 aa7.43□□□□□ -1.22
SF3B3-214ENST00000572365 KIF2CQ99661 725 aa7.43□□□□□ -1.22
SF3B3-214ENST00000572365 YIPF2Q9BWQ6 316 aa7.43□□□□□ -1.22
SF3B3-214ENST00000572365 ZNF214Q9UL59 606 aaPredicted RBP7.43□□□□□ -1.22
SF3B3-214ENST00000572365 TMA7Q9Y2S6 64 aaKnown RBP7.43□□□□□ -1.22
SF3B3-214ENST00000572365 TTC21BQ7Z4L5 1316 aa7.43□□□□□ -1.22
SF3B3-214ENST00000572365 NSD2O96028 1365 aa7.43□□□□□ -1.22
SF3B3-214ENST00000572365 TRPM1Q7Z4N2 1603 aa7.42□□□□□ -1.22
SF3B3-214ENST00000572365 C5P01031 1676 aa7.42□□□□□ -1.22
SF3B3-214ENST00000572365 LTN1O94822 1766 aa7.42□□□□□ -1.22
SF3B3-214ENST00000572365 PDPK1O15530 556 aa7.42□□□□□ -1.22
SF3B3-214ENST00000572365 DDAH1O94760 285 aa7.42□□□□□ -1.22
SF3B3-214ENST00000572365 NCAPHQ15003 741 aa7.42□□□□□ -1.22
SF3B3-214ENST00000572365 SGO2Q562F6 1265 aa7.42□□□□□ -1.22
SF3B3-214ENST00000572365 SEZ6L2Q6UXD5 910 aa7.42□□□□□ -1.22
SF3B3-214ENST00000572365 FAM177A1Q8N128 213 aaPredicted RBP7.42□□□□□ -1.22
SF3B3-214ENST00000572365 ARMC10Q8N2F6 343 aa7.42□□□□□ -1.22
SF3B3-214ENST00000572365 USHBP1Q8N6Y0 703 aa7.42□□□□□ -1.22
SF3B3-214ENST00000572365 MFSD2AQ8NA29 543 aa7.42□□□□□ -1.22
SF3B3-214ENST00000572365 FBLIM1Q8WUP2 373 aa7.42□□□□□ -1.22
SF3B3-214ENST00000572365 MEGF10Q96KG7 1140 aa7.42□□□□□ -1.22
SF3B3-214ENST00000572365 DHRS1Q96LJ7 313 aa7.42□□□□□ -1.22
SF3B3-214ENST00000572365 PSMG3-AS1Q96PY0 264 aa7.42□□□□□ -1.22
SF3B3-214ENST00000572365 KDM2BQ8NHM5 1336 aa7.42□□□□□ -1.22
SF3B3-214ENST00000572365 USP47Q96K76 1375 aa7.42□□□□□ -1.22
SF3B3-214ENST00000572365 CASP8AP2Q9UKL3 1982 aa7.42□□□□□ -1.22
SF3B3-214ENST00000572365 ABCC6O95255 1503 aa7.42□□□□□ -1.22
SF3B3-214ENST00000572365 UBR3Q6ZT12 1888 aa7.41□□□□□ -1.22
SF3B3-214ENST00000572365 FAM181BA6NEQ2 426 aa7.41□□□□□ -1.22
SF3B3-214ENST00000572365 B2RBV5 119 aa7.41□□□□□ -1.22
SF3B3-214ENST00000572365 NFICP08651 508 aa7.41□□□□□ -1.22
SF3B3-214ENST00000572365 BMP3P12645 472 aa7.41□□□□□ -1.22
SF3B3-214ENST00000572365 KCNA3P22001 575 aa7.41□□□□□ -1.22
SF3B3-214ENST00000572365 PMS1P54277 932 aaKnown RBP7.41□□□□□ -1.22
SF3B3-214ENST00000572365 RASSF7Q02833 373 aa7.41□□□□□ -1.22
SF3B3-214ENST00000572365 MAP7Q14244 749 aa7.41□□□□□ -1.22
SF3B3-214ENST00000572365 VHLLQ6RSH7 139 aa7.41□□□□□ -1.22
SF3B3-214ENST00000572365 JAZF1Q86VZ6 243 aa7.41□□□□□ -1.22
SF3B3-214ENST00000572365 NME9Q86XW9 330 aa7.41□□□□□ -1.22
SF3B3-214ENST00000572365 FAM20CQ8IXL6 584 aa7.41□□□□□ -1.22
SF3B3-214ENST00000572365 TMEM192Q8IY95 271 aa7.41□□□□□ -1.22
SF3B3-214ENST00000572365 KCNH5Q8NCM2 988 aa7.41□□□□□ -1.22
SF3B3-214ENST00000572365 PPP1R13LQ8WUF5 828 aa7.41□□□□□ -1.22
SF3B3-214ENST00000572365 UTP4Q969X6 686 aaKnown RBP7.41□□□□□ -1.22
SF3B3-214ENST00000572365 DAGLAQ9Y4D2 1042 aa7.41□□□□□ -1.22
SF3B3-214ENST00000572365 USP54Q70EL1 1684 aa7.41□□□□□ -1.22
SF3B3-214ENST00000572365 PKD1L3Q7Z443 1732 aa7.41□□□□□ -1.22
SF3B3-214ENST00000572365 KIAA1551Q9HCM1 1747 aa7.41□□□□□ -1.22
SF3B3-214ENST00000572365 KRBA1A5PL33 1030 aa7.4□□□□□ -1.22
SF3B3-214ENST00000572365 MAP4P27816 1152 aaKnown RBP7.4□□□□□ -1.22
SF3B3-214ENST00000572365 CANXP27824 592 aaKnown RBP7.4□□□□□ -1.22
SF3B3-214ENST00000572365 CHRNA5P30532 468 aa7.4□□□□□ -1.22
SF3B3-214ENST00000572365 GBP1P32455 592 aa7.4□□□□□ -1.22
SF3B3-214ENST00000572365 BBS9Q3SYG4 887 aa7.4□□□□□ -1.22
SF3B3-214ENST00000572365 MRM1Q6IN84 353 aaKnown RBP7.4□□□□□ -1.22
SF3B3-214ENST00000572365 LINC00116Q8NCU8 138 aa7.4□□□□□ -1.22
SF3B3-214ENST00000572365 BAHD1Q8TBE0 780 aaPredicted RBP7.4□□□□□ -1.22
SF3B3-214ENST00000572365 ZCRB1Q8TBF4 217 aaKnown RBP7.4□□□□□ -1.22
SF3B3-214ENST00000572365 KLHL6Q8WZ60 621 aa7.4□□□□□ -1.22
SF3B3-214ENST00000572365 SLC6A18Q96N87 628 aa7.4□□□□□ -1.22
SF3B3-214ENST00000572365 SSBP4Q9BWG4 385 aaPredicted RBP7.4□□□□□ -1.22
SF3B3-214ENST00000572365 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.4□□□□□ -1.22
SF3B3-214ENST00000572365 SUCOQ9UBS9 1254 aaKnown RBP7.4□□□□□ -1.22
SF3B3-214ENST00000572365 PCDHB10Q9UN67 800 aa7.4□□□□□ -1.22
SF3B3-214ENST00000572365 ANKRD36BQ8N2N9 1353 aa7.4□□□□□ -1.22
SF3B3-214ENST00000572365 PXDNLA1KZ92 1463 aa7.4□□□□□ -1.22
SF3B3-214ENST00000572365 TOGARAM1Q9Y4F4 1720 aa7.4□□□□□ -1.23
SF3B3-214ENST00000572365 FAM86C2PA6NEL3 165 aa7.39□□□□□ -1.23
SF3B3-214ENST00000572365 RNF225M0QZC1 329 aaPredicted RBP7.39□□□□□ -1.23
SF3B3-214ENST00000572365 DYNC1LI2O43237 492 aaPredicted RBP7.39□□□□□ -1.23
SF3B3-214ENST00000572365 CTCFP49711 727 aaPredicted RBP7.39□□□□□ -1.23
SF3B3-214ENST00000572365 SLC7A5Q01650 507 aa7.39□□□□□ -1.23
SF3B3-214ENST00000572365 NLGN1Q8N2Q7 840 aa7.39□□□□□ -1.23
SF3B3-214ENST00000572365 FLAD1Q8NFF5 587 aa7.39□□□□□ -1.23
SF3B3-214ENST00000572365 ST13P5Q8NFI4 369 aaPredicted RBP7.39□□□□□ -1.23
SF3B3-214ENST00000572365 DNAJB8Q8NHS0 232 aa7.39□□□□□ -1.23
SF3B3-214ENST00000572365 ZNF669Q96BR6 464 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 644.3 ms