RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 RUFY2Q8WXA3 655 aa21.76■■□□□ 1.07
CPNE7-209ENST00000568977 VTI1AQ96AJ9 217 aa21.76■■□□□ 1.07
CPNE7-209ENST00000568977 AP5M1Q9H0R1 490 aa21.76■■□□□ 1.07
CPNE7-209ENST00000568977 CDK7P50613 346 aa21.75■■□□□ 1.07
CPNE7-209ENST00000568977 TMEM63BQ5T3F8 832 aa21.75■■□□□ 1.07
CPNE7-209ENST00000568977 IQSEC1Q6DN90 963 aa21.75■■□□□ 1.07
CPNE7-209ENST00000568977 CXCL17Q6UXB2 119 aa21.75■■□□□ 1.07
CPNE7-209ENST00000568977 KIAA1211Q6ZU35 1233 aa21.75■■□□□ 1.07
CPNE7-209ENST00000568977 TBX21Q9UL17 535 aa21.75■■□□□ 1.07
CPNE7-209ENST00000568977 ARVCFO00192 962 aa21.74■■□□□ 1.07
CPNE7-209ENST00000568977 DYNC1LI2O43237 492 aaPredicted RBP21.74■■□□□ 1.07
CPNE7-209ENST00000568977 PARP1P09874 1014 aaKnown RBP21.74■■□□□ 1.07
CPNE7-209ENST00000568977 IFIT1BQ5T764 474 aaKnown RBP21.74■■□□□ 1.07
CPNE7-209ENST00000568977 ADGRF4Q8IZF3 695 aa21.74■■□□□ 1.07
CPNE7-209ENST00000568977 EPHB4P54760 987 aa21.73■■□□□ 1.07
CPNE7-209ENST00000568977 PTH1RQ03431 593 aa21.73■■□□□ 1.07
CPNE7-209ENST00000568977 FPGSQ05932 587 aa21.73■■□□□ 1.07
CPNE7-209ENST00000568977 SEC23AQ15436 765 aa21.73■■□□□ 1.07
CPNE7-209ENST00000568977 CYB5R4Q7L1T6 521 aa21.73■■□□□ 1.07
CPNE7-209ENST00000568977 FAM126BQ8IXS8 530 aa21.73■■□□□ 1.07
CPNE7-209ENST00000568977 Q9Y3F1 56 aa21.73■■□□□ 1.07
CPNE7-209ENST00000568977 DHX16O60231 1041 aaKnown RBP21.72■■□□□ 1.07
CPNE7-209ENST00000568977 CABYRO75952 493 aa21.72■■□□□ 1.07
CPNE7-209ENST00000568977 CYP21A2P08686 494 aa21.72■■□□□ 1.07
CPNE7-209ENST00000568977 EDNRBP24530 442 aa21.72■■□□□ 1.07
CPNE7-209ENST00000568977 PDE4DQ08499 809 aa21.72■■□□□ 1.07
CPNE7-209ENST00000568977 TRDNQ13061 729 aa21.72■■□□□ 1.07
CPNE7-209ENST00000568977 QRICH1Q2TAL8 776 aa21.72■■□□□ 1.07
CPNE7-209ENST00000568977 DUSP28Q4G0W2 176 aa21.72■■□□□ 1.07
CPNE7-209ENST00000568977 DNERQ8NFT8 737 aa21.72■■□□□ 1.07
CPNE7-209ENST00000568977 MPHOSPH6Q99547 160 aaKnown RBP21.72■■□□□ 1.07
CPNE7-209ENST00000568977 MTMR10Q9NXD2 777 aa21.72■■□□□ 1.07
CPNE7-209ENST00000568977 U3KPZ7 1027 aaPredicted RBP21.72■■□□□ 1.07
CPNE7-209ENST00000568977 ABCB11O95342 1321 aa21.72■■□□□ 1.07
CPNE7-209ENST00000568977 TLR3O15455 904 aaKnown RBP21.71■■□□□ 1.07
CPNE7-209ENST00000568977 SGSM2O43147 1006 aa21.71■■□□□ 1.07
CPNE7-209ENST00000568977 ZEB2O60315 1214 aa21.71■■□□□ 1.07
CPNE7-209ENST00000568977 TIMP1P01033 207 aa21.71■■□□□ 1.07
CPNE7-209ENST00000568977 WDR11Q9BZH6 1224 aa21.71■■□□□ 1.07
CPNE7-209ENST00000568977 RBM47A0AV96 593 aaKnown RBP21.7■■□□□ 1.06
CPNE7-209ENST00000568977 STAG2Q8N3U4 1231 aa21.7■■□□□ 1.06
CPNE7-209ENST00000568977 SLC43A3Q8NBI5 491 aa21.7■■□□□ 1.06
CPNE7-209ENST00000568977 RGS22Q8NE09 1264 aa21.7■■□□□ 1.06
CPNE7-209ENST00000568977 RNPC3Q96LT9 517 aaKnown RBP21.7■■□□□ 1.06
CPNE7-209ENST00000568977 JMJD4Q9H9V9 463 aa21.7■■□□□ 1.06
CPNE7-209ENST00000568977 ITGA7Q13683 1181 aa21.69■■□□□ 1.06
CPNE7-209ENST00000568977 PPP2R5BQ15173 497 aa21.69■■□□□ 1.06
CPNE7-209ENST00000568977 FAM109BQ6ICB4 259 aaPredicted RBP21.69■■□□□ 1.06
CPNE7-209ENST00000568977 RALYLQ86SE5 291 aaKnown RBP21.69■■□□□ 1.06
CPNE7-209ENST00000568977 PPP1R12CQ9BZL4 782 aa21.69■■□□□ 1.06
CPNE7-209ENST00000568977 MAF1Q9H063 256 aa21.69■■□□□ 1.06
CPNE7-209ENST00000568977 VAT1LQ9HCJ6 419 aa21.69■■□□□ 1.06
CPNE7-209ENST00000568977 TAF6LQ9Y6J9 622 aa21.69■■□□□ 1.06
CPNE7-209ENST00000568977 CD4P01730 458 aa21.68■■□□□ 1.06
CPNE7-209ENST00000568977 MFSD5Q6N075 450 aa21.68■■□□□ 1.06
CPNE7-209ENST00000568977 FBXO11Q86XK2 927 aa21.68■■□□□ 1.06
CPNE7-209ENST00000568977 OR6J1Q8NGC5 347 aa21.68■■□□□ 1.06
CPNE7-209ENST00000568977 SYTL5Q8TDW5 730 aaPredicted RBP21.68■■□□□ 1.06
CPNE7-209ENST00000568977 SCFD2Q8WU76 684 aa21.68■■□□□ 1.06
CPNE7-209ENST00000568977 TBC1D5Q92609 795 aa21.68■■□□□ 1.06
CPNE7-209ENST00000568977 COL20A1Q9P218 1284 aa21.68■■□□□ 1.06
CPNE7-209ENST00000568977 STXBP5LQ9Y2K9 1186 aa21.68■■□□□ 1.06
CPNE7-209ENST00000568977 GRIN2DO15399 1336 aa21.68■■□□□ 1.06
CPNE7-209ENST00000568977 LAMA2P24043 3122 aaKnown RBP21.68■■□□□ 1.06
CPNE7-209ENST00000568977 KIAA1217Q5T5P2 1943 aa21.67■■□□□ 1.06
CPNE7-209ENST00000568977 B4DLN1 442 aa21.67■■□□□ 1.06
CPNE7-209ENST00000568977 KLRF2D3W0D1 207 aa21.67■■□□□ 1.06
CPNE7-209ENST00000568977 MRPL12P52815 198 aaKnown RBP21.67■■□□□ 1.06
CPNE7-209ENST00000568977 PSMC6P62333 389 aa21.67■■□□□ 1.06
CPNE7-209ENST00000568977 SMAD3P84022 425 aaKnown RBP21.67■■□□□ 1.06
CPNE7-209ENST00000568977 ZNF697Q5TEC3 545 aa21.67■■□□□ 1.06
CPNE7-209ENST00000568977 STOX1Q6ZVD7 989 aa21.67■■□□□ 1.06
CPNE7-209ENST00000568977 MCF2L2Q86YR7 1114 aa21.67■■□□□ 1.06
CPNE7-209ENST00000568977 MAD2L2Q9UI95 211 aa21.67■■□□□ 1.06
CPNE7-209ENST00000568977 MRPL11Q9Y3B7 192 aaKnown RBP21.67■■□□□ 1.06
CPNE7-209ENST00000568977 COL6A3P12111 3177 aa21.67■■□□□ 1.06
CPNE7-209ENST00000568977 SCN10AQ9Y5Y9 1956 aa21.67■■□□□ 1.06
CPNE7-209ENST00000568977 E7EWF7 191 aa21.66■■□□□ 1.06
CPNE7-209ENST00000568977 IFIT3O14879 490 aaKnown RBP21.66■■□□□ 1.06
CPNE7-209ENST00000568977 NKRFO15226 690 aaKnown RBP eCLIP21.66■■□□□ 1.06
CPNE7-209ENST00000568977 CPT1AP50416 773 aa21.66■■□□□ 1.06
CPNE7-209ENST00000568977 NCOA7Q8NI08 942 aa21.66■■□□□ 1.06
CPNE7-209ENST00000568977 FAM161BQ96MY7 647 aa21.66■■□□□ 1.06
CPNE7-209ENST00000568977 AMNQ9BXJ7 453 aa21.66■■□□□ 1.06
CPNE7-209ENST00000568977 POLR3EQ9NVU0 708 aa21.66■■□□□ 1.06
CPNE7-209ENST00000568977 ERICH2A1L162 156 aa21.65■■□□□ 1.06
CPNE7-209ENST00000568977 B4GALT4O60513 344 aa21.65■■□□□ 1.06
CPNE7-209ENST00000568977 PURAQ00577 322 aaKnown RBP21.65■■□□□ 1.06
CPNE7-209ENST00000568977 PPIGQ13427 754 aaKnown RBP eCLIP21.65■■□□□ 1.06
CPNE7-209ENST00000568977 GRM4Q14833 912 aa21.65■■□□□ 1.06
CPNE7-209ENST00000568977 COPS5Q92905 334 aa21.65■■□□□ 1.06
CPNE7-209ENST00000568977 MAP4K1Q92918 833 aa21.65■■□□□ 1.06
CPNE7-209ENST00000568977 MTMR8Q96EF0 704 aa21.65■■□□□ 1.06
CPNE7-209ENST00000568977 GUCD1Q96NT3 240 aa21.65■■□□□ 1.06
CPNE7-209ENST00000568977 TAAR1Q96RJ0 339 aa21.65■■□□□ 1.06
CPNE7-209ENST00000568977 SEZ6LQ9BYH1 1024 aa21.65■■□□□ 1.06
CPNE7-209ENST00000568977 SENP2Q9HC62 589 aa21.65■■□□□ 1.06
CPNE7-209ENST00000568977 RBM8AQ9Y5S9 174 aaKnown RBP21.65■■□□□ 1.06
CPNE7-209ENST00000568977 BAZ2BQ9UIF8 2168 aaKnown RBP21.65■■□□□ 1.06
CPNE7-209ENST00000568977 PALM3A6NDB9 673 aaPredicted RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms