RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 PQBP1O60828 265 aaKnown RBP17.11■□□□□ 0.33
FANCA-220ENST00000566409 CDK7P50613 346 aa17.11■□□□□ 0.33
FANCA-220ENST00000566409 TRDNQ13061 729 aa17.11■□□□□ 0.33
FANCA-220ENST00000566409 LRIT3Q3SXY7 679 aa17.11■□□□□ 0.33
FANCA-220ENST00000566409 IQSEC1Q6DN90 963 aa17.11■□□□□ 0.33
FANCA-220ENST00000566409 CENPQQ7L2Z9 268 aaPredicted RBP17.11■□□□□ 0.33
FANCA-220ENST00000566409 ANKRD33Q7Z3H0 272 aa17.11■□□□□ 0.33
FANCA-220ENST00000566409 PCSK9Q8NBP7 692 aaKnown RBP17.11■□□□□ 0.33
FANCA-220ENST00000566409 RGS22Q8NE09 1264 aa17.11■□□□□ 0.33
FANCA-220ENST00000566409 NUP133Q8WUM0 1156 aa17.11■□□□□ 0.33
FANCA-220ENST00000566409 MTMR8Q96EF0 704 aa17.11■□□□□ 0.33
FANCA-220ENST00000566409 LBHD1Q9BQE6 289 aaPredicted RBP17.11■□□□□ 0.33
FANCA-220ENST00000566409 VTA1Q9NP79 307 aa17.11■□□□□ 0.33
FANCA-220ENST00000566409 ADD3Q9UEY8 706 aaKnown RBP17.11■□□□□ 0.33
FANCA-220ENST00000566409 PRKAG2Q9UGJ0 569 aa17.11■□□□□ 0.33
FANCA-220ENST00000566409 LOC102724159A0A0B4J2E5 919 aa17.1■□□□□ 0.33
FANCA-220ENST00000566409 RBM47A0AV96 593 aaKnown RBP17.1■□□□□ 0.33
FANCA-220ENST00000566409 KLRF2D3W0D1 207 aa17.1■□□□□ 0.33
FANCA-220ENST00000566409 IFIT3O14879 490 aaKnown RBP17.1■□□□□ 0.33
FANCA-220ENST00000566409 DYNC1LI2O43237 492 aaPredicted RBP17.1■□□□□ 0.33
FANCA-220ENST00000566409 PPP1R11O60927 126 aaPredicted RBP17.1■□□□□ 0.33
FANCA-220ENST00000566409 CLTBP09497 229 aa17.1■□□□□ 0.33
FANCA-220ENST00000566409 EDNRBP24530 442 aa17.1■□□□□ 0.33
FANCA-220ENST00000566409 FAAP100Q0VG06 881 aa17.1■□□□□ 0.33
FANCA-220ENST00000566409 PWP2Q15269 919 aaKnown RBP17.1■□□□□ 0.33
FANCA-220ENST00000566409 KIAA1211Q6ZU35 1233 aa17.1■□□□□ 0.33
FANCA-220ENST00000566409 NOL8Q76FK4 1167 aaKnown RBP17.1■□□□□ 0.33
FANCA-220ENST00000566409 TLK2Q86UE8 772 aa17.1■□□□□ 0.33
FANCA-220ENST00000566409 MB21D2Q8IYB1 491 aaPredicted RBP17.1■□□□□ 0.33
FANCA-220ENST00000566409 NCOA7Q8NI08 942 aa17.1■□□□□ 0.33
FANCA-220ENST00000566409 IGDCC4Q8TDY8 1250 aa17.1■□□□□ 0.33
FANCA-220ENST00000566409 BADQ92934 168 aa17.1■□□□□ 0.33
FANCA-220ENST00000566409 TOX2Q96NM4 488 aa17.1■□□□□ 0.33
FANCA-220ENST00000566409 ESYT1Q9BSJ8 1104 aa17.1■□□□□ 0.33
FANCA-220ENST00000566409 SPC25Q9HBM1 224 aa17.1■□□□□ 0.33
FANCA-220ENST00000566409 COL20A1Q9P218 1284 aa17.1■□□□□ 0.33
FANCA-220ENST00000566409 ELP1O95163 1332 aa17.1■□□□□ 0.33
FANCA-220ENST00000566409 COL6A3P12111 3177 aa17.09■□□□□ 0.33
FANCA-220ENST00000566409 OPLAHO14841 1288 aa17.09■□□□□ 0.33
FANCA-220ENST00000566409 KIAA0355O15063 1070 aa17.09■□□□□ 0.33
FANCA-220ENST00000566409 TROAPQ12815 778 aa17.09■□□□□ 0.33
FANCA-220ENST00000566409 FSCN1Q16658 493 aaKnown RBP17.09■□□□□ 0.33
FANCA-220ENST00000566409 GLT1D1Q96MS3 346 aa17.09■□□□□ 0.33
FANCA-220ENST00000566409 GPHNQ9NQX3 736 aaPredicted RBP17.09■□□□□ 0.33
FANCA-220ENST00000566409 ABCB11O95342 1321 aa17.09■□□□□ 0.33
FANCA-220ENST00000566409 KIAA1217Q5T5P2 1943 aa17.08■□□□□ 0.33
FANCA-220ENST00000566409 GRIN2DO15399 1336 aa17.08■□□□□ 0.32
FANCA-220ENST00000566409 DHX16O60231 1041 aaKnown RBP17.08■□□□□ 0.32
FANCA-220ENST00000566409 GRM4Q14833 912 aa17.08■□□□□ 0.32
FANCA-220ENST00000566409 DUSP28Q4G0W2 176 aa17.08■□□□□ 0.32
FANCA-220ENST00000566409 BMP2KLQ5H9B9 411 aa17.08■□□□□ 0.32
FANCA-220ENST00000566409 CXCL17Q6UXB2 119 aa17.08■□□□□ 0.32
FANCA-220ENST00000566409 RALYLQ86SE5 291 aaKnown RBP17.08■□□□□ 0.32
FANCA-220ENST00000566409 FBXO11Q86XK2 927 aa17.08■□□□□ 0.32
FANCA-220ENST00000566409 DNERQ8NFT8 737 aa17.08■□□□□ 0.32
FANCA-220ENST00000566409 SYTL5Q8TDW5 730 aaPredicted RBP17.08■□□□□ 0.32
FANCA-220ENST00000566409 TAAR1Q96RJ0 339 aa17.08■□□□□ 0.32
FANCA-220ENST00000566409 WDR11Q9BZH6 1224 aa17.08■□□□□ 0.32
FANCA-220ENST00000566409 Q9Y3F1 56 aa17.08■□□□□ 0.32
FANCA-220ENST00000566409 CYTH3O43739 400 aa17.07■□□□□ 0.32
FANCA-220ENST00000566409 WTAPQ15007 396 aa17.07■□□□□ 0.32
FANCA-220ENST00000566409 NECTIN1Q15223 517 aa17.07■□□□□ 0.32
FANCA-220ENST00000566409 TMEM67Q5HYA8 995 aa17.07■□□□□ 0.32
FANCA-220ENST00000566409 C9orf50Q5SZB4 431 aa17.07■□□□□ 0.32
FANCA-220ENST00000566409 MAF1Q9H063 256 aa17.07■□□□□ 0.32
FANCA-220ENST00000566409 AP5M1Q9H0R1 490 aa17.07■□□□□ 0.32
FANCA-220ENST00000566409 RIOX1Q9H6W3 641 aa17.07■□□□□ 0.32
FANCA-220ENST00000566409 A0A0U1RQG5 324 aaPredicted RBP17.06■□□□□ 0.32
FANCA-220ENST00000566409 DCDC2CA8MYV0 355 aa17.06■□□□□ 0.32
FANCA-220ENST00000566409 ARVCFO00192 962 aa17.06■□□□□ 0.32
FANCA-220ENST00000566409 SLC27A2O14975 620 aa17.06■□□□□ 0.32
FANCA-220ENST00000566409 EPHB4P54760 987 aa17.06■□□□□ 0.32
FANCA-220ENST00000566409 PDE4DQ08499 809 aa17.06■□□□□ 0.32
FANCA-220ENST00000566409 SHHQ15465 462 aa17.06■□□□□ 0.32
FANCA-220ENST00000566409 SLC43A3Q8NBI5 491 aa17.06■□□□□ 0.32
FANCA-220ENST00000566409 VTI1AQ96AJ9 217 aa17.06■□□□□ 0.32
FANCA-220ENST00000566409 AMNQ9BXJ7 453 aa17.06■□□□□ 0.32
FANCA-220ENST00000566409 LY9Q9HBG7 655 aa17.06■□□□□ 0.32
FANCA-220ENST00000566409 TMEM39AQ9NV64 488 aa17.06■□□□□ 0.32
FANCA-220ENST00000566409 TBX21Q9UL17 535 aa17.06■□□□□ 0.32
FANCA-220ENST00000566409 MRPL11Q9Y3B7 192 aaKnown RBP17.06■□□□□ 0.32
FANCA-220ENST00000566409 ERICH2A1L162 156 aa17.05■□□□□ 0.32
FANCA-220ENST00000566409 ZBTB5O15062 677 aa17.05■□□□□ 0.32
FANCA-220ENST00000566409 CREB3L3Q68CJ9 461 aa17.05■□□□□ 0.32
FANCA-220ENST00000566409 FAM126BQ8IXS8 530 aa17.05■□□□□ 0.32
FANCA-220ENST00000566409 COPS5Q92905 334 aa17.05■□□□□ 0.32
FANCA-220ENST00000566409 PIGSQ96S52 555 aa17.05■□□□□ 0.32
FANCA-220ENST00000566409 ARIH2O95376 493 aa17.04■□□□□ 0.32
FANCA-220ENST00000566409 CD4P01730 458 aa17.04■□□□□ 0.32
FANCA-220ENST00000566409 RAG1P15918 1043 aa17.04■□□□□ 0.32
FANCA-220ENST00000566409 PSMC6P62333 389 aa17.04■□□□□ 0.32
FANCA-220ENST00000566409 GHRHRQ02643 423 aa17.04■□□□□ 0.32
FANCA-220ENST00000566409 SART3Q15020 963 aaKnown RBP17.04■□□□□ 0.32
FANCA-220ENST00000566409 MCF2L2Q86YR7 1114 aa17.04■□□□□ 0.32
FANCA-220ENST00000566409 MYL10Q9BUA6 226 aa17.04■□□□□ 0.32
FANCA-220ENST00000566409 ANO2Q9NQ90 1003 aa17.04■□□□□ 0.32
FANCA-220ENST00000566409 PCDHA1Q9Y5I3 950 aa17.04■□□□□ 0.32
FANCA-220ENST00000566409 SCN10AQ9Y5Y9 1956 aa17.04■□□□□ 0.32
FANCA-220ENST00000566409 MROH7Q68CQ1 1323 aa17.03■□□□□ 0.32
FANCA-220ENST00000566409 CDH23Q9H251 3354 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms