RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 CDK7P50613 346 aa18.29■□□□□ 0.52
USB1-208ENST00000563207 TNFAIP2Q03169 654 aa18.29■□□□□ 0.52
USB1-208ENST00000563207 ZNF543Q08ER8 600 aa18.29■□□□□ 0.52
USB1-208ENST00000563207 SLC30A10Q6XR72 485 aa18.29■□□□□ 0.52
USB1-208ENST00000563207 ANKRD33Q7Z3H0 272 aa18.29■□□□□ 0.52
USB1-208ENST00000563207 GUCD1Q96NT3 240 aa18.29■□□□□ 0.52
USB1-208ENST00000563207 GNEQ9Y223 722 aaKnown RBP18.29■□□□□ 0.52
USB1-208ENST00000563207 MOXD2PA6NHM9 499 aa18.28■□□□□ 0.52
USB1-208ENST00000563207 HMGB1P09429 215 aaKnown RBP18.28■□□□□ 0.52
USB1-208ENST00000563207 RAG1P15918 1043 aa18.28■□□□□ 0.52
USB1-208ENST00000563207 SART3Q15020 963 aaKnown RBP18.28■□□□□ 0.52
USB1-208ENST00000563207 STOX1Q6ZVD7 989 aa18.28■□□□□ 0.52
USB1-208ENST00000563207 NOL8Q76FK4 1167 aaKnown RBP18.28■□□□□ 0.52
USB1-208ENST00000563207 NUP133Q8WUM0 1156 aa18.28■□□□□ 0.52
USB1-208ENST00000563207 ANKS1AQ92625 1134 aa18.28■□□□□ 0.52
USB1-208ENST00000563207 VTI1AQ96AJ9 217 aa18.28■□□□□ 0.52
USB1-208ENST00000563207 ZSCAN10Q96SZ4 725 aaPredicted RBP18.28■□□□□ 0.52
USB1-208ENST00000563207 UBAC1Q9BSL1 405 aa18.28■□□□□ 0.52
USB1-208ENST00000563207 UBA5Q9GZZ9 404 aa18.28■□□□□ 0.52
USB1-208ENST00000563207 ASB14A6NK59 587 aa18.27■□□□□ 0.52
USB1-208ENST00000563207 DYNC1LI2O43237 492 aaPredicted RBP18.27■□□□□ 0.52
USB1-208ENST00000563207 SNHG28P0DPA3 235 aa18.27■□□□□ 0.52
USB1-208ENST00000563207 MCM5P33992 734 aa18.27■□□□□ 0.52
USB1-208ENST00000563207 CXCL17Q6UXB2 119 aa18.27■□□□□ 0.52
USB1-208ENST00000563207 MB21D2Q8IYB1 491 aaPredicted RBP18.27■□□□□ 0.52
USB1-208ENST00000563207 GLT1D1Q96MS3 346 aa18.27■□□□□ 0.52
USB1-208ENST00000563207 NEK1Q96PY6 1258 aa18.27■□□□□ 0.52
USB1-208ENST00000563207 TAF6LQ9Y6J9 622 aa18.27■□□□□ 0.52
USB1-208ENST00000563207 A0A0C4DFX4 3053 aa18.26■□□□□ 0.51
USB1-208ENST00000563207 GRIN2DO15399 1336 aa18.26■□□□□ 0.51
USB1-208ENST00000563207 ERICH2A1L162 156 aa18.26■□□□□ 0.51
USB1-208ENST00000563207 PTPDC1A2A3K4 754 aa18.26■□□□□ 0.51
USB1-208ENST00000563207 TLK2Q86UE8 772 aa18.26■□□□□ 0.51
USB1-208ENST00000563207 RASEFQ8IZ41 740 aa18.26■□□□□ 0.51
USB1-208ENST00000563207 SLC17A8Q8NDX2 589 aa18.26■□□□□ 0.51
USB1-208ENST00000563207 TBC1D5Q92609 795 aa18.26■□□□□ 0.51
USB1-208ENST00000563207 TOX2Q96NM4 488 aa18.26■□□□□ 0.51
USB1-208ENST00000563207 TBX21Q9UL17 535 aa18.26■□□□□ 0.51
USB1-208ENST00000563207 WDR19Q8NEZ3 1342 aa18.25■□□□□ 0.51
USB1-208ENST00000563207 DCDC2CA8MYV0 355 aa18.25■□□□□ 0.51
USB1-208ENST00000563207 ARVCFO00192 962 aa18.25■□□□□ 0.51
USB1-208ENST00000563207 CALML3P27482 149 aa18.25■□□□□ 0.51
USB1-208ENST00000563207 PSMA5P28066 241 aa18.25■□□□□ 0.51
USB1-208ENST00000563207 ALDH5A1P51649 535 aaPredicted RBP18.25■□□□□ 0.51
USB1-208ENST00000563207 ANAPC15P60006 121 aa18.25■□□□□ 0.51
USB1-208ENST00000563207 PSMC6P62333 389 aa18.25■□□□□ 0.51
USB1-208ENST00000563207 NKX3-2P78367 333 aa18.25■□□□□ 0.51
USB1-208ENST00000563207 C16orf59Q7L2K0 433 aa18.25■□□□□ 0.51
USB1-208ENST00000563207 PCSK9Q8NBP7 692 aaKnown RBP18.25■□□□□ 0.51
USB1-208ENST00000563207 MORC4Q8TE76 937 aa18.25■□□□□ 0.51
USB1-208ENST00000563207 PPP1R13LQ8WUF5 828 aa18.25■□□□□ 0.51
USB1-208ENST00000563207 TMEM87BQ96K49 555 aa18.25■□□□□ 0.51
USB1-208ENST00000563207 SNX14Q9Y5W7 946 aa18.25■□□□□ 0.51
USB1-208ENST00000563207 ELP1O95163 1332 aa18.24■□□□□ 0.51
USB1-208ENST00000563207 TNKSO95271 1327 aa18.24■□□□□ 0.51
USB1-208ENST00000563207 UNC80Q8N2C7 3258 aa18.24■□□□□ 0.51
USB1-208ENST00000563207 RBAK-RBAKDNI3L0D1 243 aa18.24■□□□□ 0.51
USB1-208ENST00000563207 FSCN1Q16658 493 aaKnown RBP18.24■□□□□ 0.51
USB1-208ENST00000563207 USH1GQ495M9 461 aa18.24■□□□□ 0.51
USB1-208ENST00000563207 FAM109BQ6ICB4 259 aaPredicted RBP18.24■□□□□ 0.51
USB1-208ENST00000563207 CYB5R4Q7L1T6 521 aa18.24■□□□□ 0.51
USB1-208ENST00000563207 FAM126BQ8IXS8 530 aa18.24■□□□□ 0.51
USB1-208ENST00000563207 TMTC2Q8N394 836 aa18.24■□□□□ 0.51
USB1-208ENST00000563207 ENAHQ8N8S7 591 aaPredicted RBP18.24■□□□□ 0.51
USB1-208ENST00000563207 SPC25Q9HBM1 224 aa18.24■□□□□ 0.51
USB1-208ENST00000563207 STXBP5LQ9Y2K9 1186 aa18.24■□□□□ 0.51
USB1-208ENST00000563207 CDH23Q9H251 3354 aa18.24■□□□□ 0.51
USB1-208ENST00000563207 UMODL1Q5DID0 1318 aa18.23■□□□□ 0.51
USB1-208ENST00000563207 IFIT3O14879 490 aaKnown RBP18.23■□□□□ 0.51
USB1-208ENST00000563207 TIMP1P01033 207 aa18.23■□□□□ 0.51
USB1-208ENST00000563207 FPGSQ05932 587 aa18.23■□□□□ 0.51
USB1-208ENST00000563207 SEC23AQ15436 765 aa18.23■□□□□ 0.51
USB1-208ENST00000563207 IFIT1BQ5T764 474 aaKnown RBP18.23■□□□□ 0.51
USB1-208ENST00000563207 DHX32Q7L7V1 743 aaKnown RBP18.23■□□□□ 0.51
USB1-208ENST00000563207 PNMA1Q8ND90 353 aa18.23■□□□□ 0.51
USB1-208ENST00000563207 PPP1R12CQ9BZL4 782 aa18.23■□□□□ 0.51
USB1-208ENST00000563207 TM6SF1Q9BZW5 370 aa18.23■□□□□ 0.51
USB1-208ENST00000563207 TTYH1Q9H313 450 aaPredicted RBP18.23■□□□□ 0.51
USB1-208ENST00000563207 KAT14Q9H8E8 782 aa18.23■□□□□ 0.51
USB1-208ENST00000563207 A0A0U1RQG5 324 aaPredicted RBP18.22■□□□□ 0.51
USB1-208ENST00000563207 PRC1O43663 620 aa18.22■□□□□ 0.51
USB1-208ENST00000563207 SEC24BO95487 1268 aa18.22■□□□□ 0.51
USB1-208ENST00000563207 CD4P01730 458 aa18.22■□□□□ 0.51
USB1-208ENST00000563207 ACRP10323 421 aa18.22■□□□□ 0.51
USB1-208ENST00000563207 CYP2C18P33260 490 aa18.22■□□□□ 0.51
USB1-208ENST00000563207 RPS6P62753 249 aaKnown RBP18.22■□□□□ 0.51
USB1-208ENST00000563207 WTAPQ15007 396 aa18.22■□□□□ 0.51
USB1-208ENST00000563207 IQSEC1Q6DN90 963 aa18.22■□□□□ 0.51
USB1-208ENST00000563207 RNF207Q6ZRF8 634 aa18.22■□□□□ 0.51
USB1-208ENST00000563207 IGDCC4Q8TDY8 1250 aa18.22■□□□□ 0.51
USB1-208ENST00000563207 COPS5Q92905 334 aa18.22■□□□□ 0.51
USB1-208ENST00000563207 RNPC3Q96LT9 517 aaKnown RBP18.22■□□□□ 0.51
USB1-208ENST00000563207 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.22■□□□□ 0.51
USB1-208ENST00000563207 AP5M1Q9H0R1 490 aa18.22■□□□□ 0.51
USB1-208ENST00000563207 TRPV6Q9H1D0 765 aa18.22■□□□□ 0.51
USB1-208ENST00000563207 UPF2Q9HAU5 1272 aaKnown RBP18.22■□□□□ 0.51
USB1-208ENST00000563207 CSF2RAP15509 400 aa18.21■□□□□ 0.51
USB1-208ENST00000563207 LIFRP42702 1097 aa18.21■□□□□ 0.51
USB1-208ENST00000563207 ANTXR2P58335 489 aa18.21■□□□□ 0.51
USB1-208ENST00000563207 ADCK5Q3MIX3 580 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms