RNA–Protein interactions for RNA: ENST00000561345.5

HOMER2-208, Transcript of homer scaffold protein 2, human

TSL 3

Gene HOMER2, Length 659 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HOMER2-208	ENST00000561345	CYTH3	O43739	400 aa		11.95	□□□□□ -0.5
HOMER2-208	ENST00000561345	SMPD1	P17405	629 aa		11.95	□□□□□ -0.5
HOMER2-208	ENST00000561345	IRX5	P78411	483 aa	Predicted RBP	11.95	□□□□□ -0.5
HOMER2-208	ENST00000561345	TNFAIP2	Q03169	654 aa		11.95	□□□□□ -0.5
HOMER2-208	ENST00000561345	COL9A3	Q14050	684 aa	Predicted RBP	11.95	□□□□□ -0.5
HOMER2-208	ENST00000561345	WTAP	Q15007	396 aa		11.95	□□□□□ -0.5
HOMER2-208	ENST00000561345	KCNA10	Q16322	511 aa		11.95	□□□□□ -0.5
HOMER2-208	ENST00000561345	TRIM60	Q495X7	471 aa		11.95	□□□□□ -0.5
HOMER2-208	ENST00000561345	DUSP28	Q4G0W2	176 aa		11.95	□□□□□ -0.5
HOMER2-208	ENST00000561345	FBXO11	Q86XK2	927 aa		11.95	□□□□□ -0.5
HOMER2-208	ENST00000561345	FBXO16	Q8IX29	292 aa	Predicted RBP	11.95	□□□□□ -0.5
HOMER2-208	ENST00000561345	SAMD3	Q8N6K7	520 aa		11.95	□□□□□ -0.5
HOMER2-208	ENST00000561345	NUP133	Q8WUM0	1156 aa		11.95	□□□□□ -0.5
HOMER2-208	ENST00000561345	FERMT2	Q96AC1	680 aa		11.95	□□□□□ -0.5
HOMER2-208	ENST00000561345	LY9	Q9HBG7	655 aa		11.95	□□□□□ -0.5
HOMER2-208	ENST00000561345	SPC25	Q9HBM1	224 aa		11.95	□□□□□ -0.5
HOMER2-208	ENST00000561345	PDLIM7	Q9NR12	457 aa		11.95	□□□□□ -0.5
HOMER2-208	ENST00000561345	MRPL11	Q9Y3B7	192 aa	Known RBP	11.95	□□□□□ -0.5
HOMER2-208	ENST00000561345	DDX49	Q9Y6V7	483 aa	Known RBP	11.95	□□□□□ -0.5
HOMER2-208	ENST00000561345	PPP1R11	O60927	126 aa	Predicted RBP	11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	ASGR1	P07306	291 aa		11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	C6orf222	P0C671	652 aa	Predicted RBP	11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	SMARCA1	P28370	1054 aa		11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	LIFR	P42702	1097 aa		11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	CDK7	P50613	346 aa		11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	LRIT3	Q3SXY7	679 aa		11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	TSGA10IP	Q3SY00	556 aa		11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	USH1G	Q495M9	461 aa		11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	TMEM67	Q5HYA8	995 aa		11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	CREB3L3	Q68CJ9	461 aa		11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	TLK2	Q86UE8	772 aa		11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	MCF2L2	Q86YR7	1114 aa		11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	SLC43A3	Q8NBI5	491 aa		11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	TMEM87B	Q96K49	555 aa		11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	GLT1D1	Q96MS3	346 aa		11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	AMN	Q9BXJ7	453 aa		11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	STARD7	Q9NQZ5	370 aa		11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	PDGFC	Q9NRA1	345 aa		11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	MAP3K20	Q9NYL2	800 aa	Known RBP	11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	COL20A1	Q9P218	1284 aa		11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	ATP11B	Q9Y2G3	1177 aa		11.94	□□□□□ -0.5
HOMER2-208	ENST00000561345	SH2B2	O14492	632 aa	Predicted RBP	11.93	□□□□□ -0.5
HOMER2-208	ENST00000561345	KIAA0355	O15063	1070 aa		11.93	□□□□□ -0.5
HOMER2-208	ENST00000561345	CDC45	O75419	566 aa		11.93	□□□□□ -0.5
HOMER2-208	ENST00000561345	DDAH1	O94760	285 aa		11.93	□□□□□ -0.5
HOMER2-208	ENST00000561345	MYCN	P04198	464 aa	Predicted RBP	11.93	□□□□□ -0.5
HOMER2-208	ENST00000561345	CALML3	P27482	149 aa		11.93	□□□□□ -0.5
HOMER2-208	ENST00000561345	MCM5	P33992	734 aa		11.93	□□□□□ -0.5
HOMER2-208	ENST00000561345	HSD17B4	P51659	736 aa		11.93	□□□□□ -0.5
HOMER2-208	ENST00000561345	TLE2	Q04725	743 aa		11.93	□□□□□ -0.5
HOMER2-208	ENST00000561345	GNAS	Q5JWF2	1037 aa		11.93	□□□□□ -0.5
HOMER2-208	ENST00000561345	CHST3	Q7LGC8	479 aa		11.93	□□□□□ -0.5
HOMER2-208	ENST00000561345	CATIP	Q7Z7H3	387 aa		11.93	□□□□□ -0.5
HOMER2-208	ENST00000561345	SGMS1	Q86VZ5	419 aa		11.93	□□□□□ -0.5
HOMER2-208	ENST00000561345	TDH	Q8IZJ6	230 aa		11.93	□□□□□ -0.5
HOMER2-208	ENST00000561345	TMTC2	Q8N394	836 aa		11.93	□□□□□ -0.5
HOMER2-208	ENST00000561345	TBC1D5	Q92609	795 aa		11.93	□□□□□ -0.5
HOMER2-208	ENST00000561345	CCDC136	Q96JN2	1154 aa		11.93	□□□□□ -0.5
HOMER2-208	ENST00000561345	MPHOSPH6	Q99547	160 aa	Known RBP	11.93	□□□□□ -0.5
HOMER2-208	ENST00000561345	SPZ1	Q9BXG8	430 aa		11.93	□□□□□ -0.5
HOMER2-208	ENST00000561345	ANO2	Q9NQ90	1003 aa		11.93	□□□□□ -0.5
HOMER2-208	ENST00000561345	MROH7	Q68CQ1	1323 aa		11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	MYH6	P13533	1939 aa		11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	TRIM43B	A6NCK2	446 aa		11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345		B4DLN1	442 aa		11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	NKRF	O15226	690 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	PRC1	O43663	620 aa		11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	CABYR	O75952	493 aa		11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	CLTB	P09497	229 aa		11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	MRPL12	P52815	198 aa	Known RBP	11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	FAAP100	Q0VG06	881 aa		11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	TRAF1	Q13077	416 aa		11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	FSCN1	Q16658	493 aa	Known RBP	11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	TMEM63B	Q5T3F8	832 aa		11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	GPR153	Q6NV75	609 aa		11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	EEPD1	Q7L9B9	569 aa		11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	ZNF654	Q8IZM8	581 aa		11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	SCFD2	Q8WU76	684 aa		11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	KCNB2	Q92953	911 aa		11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	IWS1	Q96ST2	819 aa		11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	SEZ6L	Q9BYH1	1024 aa		11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	WDR11	Q9BZH6	1224 aa		11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	PRKAG2	Q9UGJ0	569 aa		11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	TBX21	Q9UL17	535 aa		11.92	□□□□□ -0.5
HOMER2-208	ENST00000561345	PNMA6F	A0A0J9YX94	578 aa		11.91	□□□□□ -0.5
HOMER2-208	ENST00000561345		A0A0U1RQG5	324 aa	Predicted RBP	11.91	□□□□□ -0.5
HOMER2-208	ENST00000561345	ARVCF	O00192	962 aa		11.91	□□□□□ -0.5
HOMER2-208	ENST00000561345	PTGS1	P23219	599 aa		11.91	□□□□□ -0.5
HOMER2-208	ENST00000561345	ITGB8	P26012	769 aa		11.91	□□□□□ -0.5
HOMER2-208	ENST00000561345	MDM2	Q00987	491 aa	Predicted RBP	11.91	□□□□□ -0.5
HOMER2-208	ENST00000561345	PDE4D	Q08499	809 aa		11.91	□□□□□ -0.5
HOMER2-208	ENST00000561345	RNF20	Q5VTR2	975 aa		11.91	□□□□□ -0.5
HOMER2-208	ENST00000561345	CCDC62	Q6P9F0	684 aa		11.91	□□□□□ -0.5
HOMER2-208	ENST00000561345	CASC1	Q6TDU7	716 aa		11.91	□□□□□ -0.5
HOMER2-208	ENST00000561345	SH3RF1	Q7Z6J0	888 aa		11.91	□□□□□ -0.5
HOMER2-208	ENST00000561345	NSUN6	Q8TEA1	469 aa	Known RBP	11.91	□□□□□ -0.5
HOMER2-208	ENST00000561345	TAAR1	Q96RJ0	339 aa		11.91	□□□□□ -0.5
HOMER2-208	ENST00000561345	UBE2O	Q9C0C9	1292 aa	Known RBP	11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms