RNA–Protein interactions for RNA: ENST00000561321.1

SEMA4B-220, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-220ENST00000561321 PDLIM7Q9NR12 457 aa14.37□□□□□ -0.11
SEMA4B-220ENST00000561321 ABCB11O95342 1321 aa14.37□□□□□ -0.11
SEMA4B-220ENST00000561321 LTBP2Q14767 1821 aa14.36□□□□□ -0.11
SEMA4B-220ENST00000561321 KLRF2D3W0D1 207 aa14.36□□□□□ -0.11
SEMA4B-220ENST00000561321 DYNC1LI2O43237 492 aaPredicted RBP14.36□□□□□ -0.11
SEMA4B-220ENST00000561321 CST5P28325 142 aaPredicted RBP14.36□□□□□ -0.11
SEMA4B-220ENST00000561321 PDE4DQ08499 809 aa14.36□□□□□ -0.11
SEMA4B-220ENST00000561321 TMEM67Q5HYA8 995 aa14.36□□□□□ -0.11
SEMA4B-220ENST00000561321 TMEM63BQ5T3F8 832 aa14.36□□□□□ -0.11
SEMA4B-220ENST00000561321 C1orf53Q5VUE5 145 aa14.36□□□□□ -0.11
SEMA4B-220ENST00000561321 TAPT1Q6NXT6 567 aa14.36□□□□□ -0.11
SEMA4B-220ENST00000561321 FBXO11Q86XK2 927 aa14.36□□□□□ -0.11
SEMA4B-220ENST00000561321 MORC4Q8TE76 937 aa14.36□□□□□ -0.11
SEMA4B-220ENST00000561321 GLT1D1Q96MS3 346 aa14.36□□□□□ -0.11
SEMA4B-220ENST00000561321 AP5M1Q9H0R1 490 aa14.36□□□□□ -0.11
SEMA4B-220ENST00000561321 ANO2Q9NQ90 1003 aa14.36□□□□□ -0.11
SEMA4B-220ENST00000561321 MAD2L2Q9UI95 211 aa14.36□□□□□ -0.11
SEMA4B-220ENST00000561321 GNEQ9Y223 722 aaKnown RBP14.36□□□□□ -0.11
SEMA4B-220ENST00000561321 BAZ2BQ9UIF8 2168 aaKnown RBP14.35□□□□□ -0.11
SEMA4B-220ENST00000561321 TRIM43BA6NCK2 446 aa14.35□□□□□ -0.11
SEMA4B-220ENST00000561321 CTAGE5O15320 804 aa14.35□□□□□ -0.11
SEMA4B-220ENST00000561321 CLTBP09497 229 aa14.35□□□□□ -0.11
SEMA4B-220ENST00000561321 ANTXR2P58335 489 aa14.35□□□□□ -0.11
SEMA4B-220ENST00000561321 FSCN1Q16658 493 aaKnown RBP14.35□□□□□ -0.11
SEMA4B-220ENST00000561321 BMP2KLQ5H9B9 411 aa14.35□□□□□ -0.11
SEMA4B-220ENST00000561321 IQSEC1Q6DN90 963 aa14.35□□□□□ -0.11
SEMA4B-220ENST00000561321 HOMER1Q86YM7 354 aa14.35□□□□□ -0.11
SEMA4B-220ENST00000561321 MB21D2Q8IYB1 491 aaPredicted RBP14.35□□□□□ -0.11
SEMA4B-220ENST00000561321 TBC1D5Q92609 795 aa14.35□□□□□ -0.11
SEMA4B-220ENST00000561321 BADQ92934 168 aa14.35□□□□□ -0.11
SEMA4B-220ENST00000561321 TRIM43Q96BQ3 446 aaPredicted RBP14.35□□□□□ -0.11
SEMA4B-220ENST00000561321 LRCH3Q96II8 777 aa14.35□□□□□ -0.11
SEMA4B-220ENST00000561321 CCDC136Q96JN2 1154 aa14.35□□□□□ -0.11
SEMA4B-220ENST00000561321 MPHOSPH6Q99547 160 aaKnown RBP14.35□□□□□ -0.11
SEMA4B-220ENST00000561321 PALM3A6NDB9 673 aaPredicted RBP14.34□□□□□ -0.11
SEMA4B-220ENST00000561321 SLC27A2O14975 620 aa14.34□□□□□ -0.11
SEMA4B-220ENST00000561321 GRM4Q14833 912 aa14.34□□□□□ -0.11
SEMA4B-220ENST00000561321 CASC1Q6TDU7 716 aa14.34□□□□□ -0.11
SEMA4B-220ENST00000561321 CATIPQ7Z7H3 387 aa14.34□□□□□ -0.11
SEMA4B-220ENST00000561321 MCF2L2Q86YR7 1114 aa14.34□□□□□ -0.11
SEMA4B-220ENST00000561321 RGS22Q8NE09 1264 aa14.34□□□□□ -0.11
SEMA4B-220ENST00000561321 DNERQ8NFT8 737 aa14.34□□□□□ -0.11
SEMA4B-220ENST00000561321 WDR11Q9BZH6 1224 aa14.34□□□□□ -0.11
SEMA4B-220ENST00000561321 TMEM39AQ9NV64 488 aa14.34□□□□□ -0.11
SEMA4B-220ENST00000561321 MRPL11Q9Y3B7 192 aaKnown RBP14.34□□□□□ -0.11
SEMA4B-220ENST00000561321 ELP1O95163 1332 aa14.34□□□□□ -0.11
SEMA4B-220ENST00000561321 LOC102724159A0A0B4J2E5 919 aa14.33□□□□□ -0.12
SEMA4B-220ENST00000561321 A0A0U1RQG5 324 aaPredicted RBP14.33□□□□□ -0.12
SEMA4B-220ENST00000561321 DCDC2CA8MYV0 355 aa14.33□□□□□ -0.12
SEMA4B-220ENST00000561321 ZEB2O60315 1214 aa14.33□□□□□ -0.12
SEMA4B-220ENST00000561321 CFBP00751 764 aa14.33□□□□□ -0.12
SEMA4B-220ENST00000561321 PWP2Q15269 919 aaKnown RBP14.33□□□□□ -0.12
SEMA4B-220ENST00000561321 CREB3L3Q68CJ9 461 aa14.33□□□□□ -0.12
SEMA4B-220ENST00000561321 CXCL17Q6UXB2 119 aa14.33□□□□□ -0.12
SEMA4B-220ENST00000561321 SYTL5Q8TDW5 730 aaPredicted RBP14.33□□□□□ -0.12
SEMA4B-220ENST00000561321 IGDCC4Q8TDY8 1250 aa14.33□□□□□ -0.12
SEMA4B-220ENST00000561321 PIBF1Q8WXW3 757 aa14.33□□□□□ -0.12
SEMA4B-220ENST00000561321 TAAR1Q96RJ0 339 aa14.33□□□□□ -0.12
SEMA4B-220ENST00000561321 MYL10Q9BUA6 226 aa14.33□□□□□ -0.12
SEMA4B-220ENST00000561321 AMNQ9BXJ7 453 aa14.33□□□□□ -0.12
SEMA4B-220ENST00000561321 GPHNQ9NQX3 736 aaPredicted RBP14.33□□□□□ -0.12
SEMA4B-220ENST00000561321 B4DLN1 442 aa14.32□□□□□ -0.12
SEMA4B-220ENST00000561321 ZBTB5O15062 677 aa14.32□□□□□ -0.12
SEMA4B-220ENST00000561321 PRC1O43663 620 aa14.32□□□□□ -0.12
SEMA4B-220ENST00000561321 PPP1R11O60927 126 aaPredicted RBP14.32□□□□□ -0.12
SEMA4B-220ENST00000561321 RAG1P15918 1043 aa14.32□□□□□ -0.12
SEMA4B-220ENST00000561321 ITGB8P26012 769 aa14.32□□□□□ -0.12
SEMA4B-220ENST00000561321 MRPL12P52815 198 aaKnown RBP14.32□□□□□ -0.12
SEMA4B-220ENST00000561321 FAAP100Q0VG06 881 aa14.32□□□□□ -0.12
SEMA4B-220ENST00000561321 TROAPQ12815 778 aa14.32□□□□□ -0.12
SEMA4B-220ENST00000561321 SLC35G1Q2M3R5 365 aa14.32□□□□□ -0.12
SEMA4B-220ENST00000561321 DUSP28Q4G0W2 176 aa14.32□□□□□ -0.12
SEMA4B-220ENST00000561321 NFXL1Q6ZNB6 911 aa14.32□□□□□ -0.12
SEMA4B-220ENST00000561321 ANKRD33Q7Z3H0 272 aa14.32□□□□□ -0.12
SEMA4B-220ENST00000561321 TOX2Q96NM4 488 aa14.32□□□□□ -0.12
SEMA4B-220ENST00000561321 PIGSQ96S52 555 aa14.32□□□□□ -0.12
SEMA4B-220ENST00000561321 LY9Q9HBG7 655 aa14.32□□□□□ -0.12
SEMA4B-220ENST00000561321 COL20A1Q9P218 1284 aa14.32□□□□□ -0.12
SEMA4B-220ENST00000561321 Q9Y3F1 56 aa14.32□□□□□ -0.12
SEMA4B-220ENST00000561321 PCDHA1Q9Y5I3 950 aa14.32□□□□□ -0.12
SEMA4B-220ENST00000561321 LAMA2P24043 3122 aaKnown RBP14.31□□□□□ -0.12
SEMA4B-220ENST00000561321 ARVCFO00192 962 aa14.31□□□□□ -0.12
SEMA4B-220ENST00000561321 EIF2AK2P19525 551 aaKnown RBP14.31□□□□□ -0.12
SEMA4B-220ENST00000561321 EDNRBP24530 442 aa14.31□□□□□ -0.12
SEMA4B-220ENST00000561321 MCM5P33992 734 aa14.31□□□□□ -0.12
SEMA4B-220ENST00000561321 NKX3-2P78367 333 aa14.31□□□□□ -0.12
SEMA4B-220ENST00000561321 COL9A3Q14050 684 aaPredicted RBP14.31□□□□□ -0.12
SEMA4B-220ENST00000561321 PPP2R5BQ15173 497 aa14.31□□□□□ -0.12
SEMA4B-220ENST00000561321 LRIT3Q3SXY7 679 aa14.31□□□□□ -0.12
SEMA4B-220ENST00000561321 ARHGEF16Q5VV41 709 aa14.31□□□□□ -0.12
SEMA4B-220ENST00000561321 ZNF654Q8IZM8 581 aa14.31□□□□□ -0.12
SEMA4B-220ENST00000561321 OR6J1Q8NGC5 347 aa14.31□□□□□ -0.12
SEMA4B-220ENST00000561321 NSUN6Q8TEA1 469 aaKnown RBP14.31□□□□□ -0.12
SEMA4B-220ENST00000561321 MTMR8Q96EF0 704 aa14.31□□□□□ -0.12
SEMA4B-220ENST00000561321 RMDN3Q96TC7 470 aa14.31□□□□□ -0.12
SEMA4B-220ENST00000561321 LRRC2Q9BYS8 371 aa14.31□□□□□ -0.12
SEMA4B-220ENST00000561321 MROH7Q68CQ1 1323 aa14.31□□□□□ -0.12
SEMA4B-220ENST00000561321 RBM47A0AV96 593 aaKnown RBP14.3□□□□□ -0.12
SEMA4B-220ENST00000561321 OPLAHO14841 1288 aa14.3□□□□□ -0.12
SEMA4B-220ENST00000561321 KIAA0355O15063 1070 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms