RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 ADD3Q9UEY8 706 aaKnown RBP23.09■■□□□ 1.29
TSPAN3-210ENST00000561277 AKR1A1P14550 325 aa23.08■■□□□ 1.29
TSPAN3-210ENST00000561277 ALDH5A1P51649 535 aaPredicted RBP23.08■■□□□ 1.29
TSPAN3-210ENST00000561277 APOBRQ0VD83 1088 aa23.08■■□□□ 1.29
TSPAN3-210ENST00000561277 MCF2L2Q86YR7 1114 aa23.08■■□□□ 1.29
TSPAN3-210ENST00000561277 RRP36Q96EU6 259 aaKnown RBP23.08■■□□□ 1.29
TSPAN3-210ENST00000561277 ABHD16BQ9H3Z7 469 aa23.08■■□□□ 1.29
TSPAN3-210ENST00000561277 GOLGA8AA7E2F4 631 aa23.07■■□□□ 1.28
TSPAN3-210ENST00000561277 GOLGA8BA8MQT2 603 aa23.07■■□□□ 1.28
TSPAN3-210ENST00000561277 CFBP00751 764 aa23.07■■□□□ 1.28
TSPAN3-210ENST00000561277 RTN1Q16799 776 aa23.07■■□□□ 1.28
TSPAN3-210ENST00000561277 TMTC3Q6ZXV5 915 aa23.07■■□□□ 1.28
TSPAN3-210ENST00000561277 RUFY3Q7L099 469 aa23.07■■□□□ 1.28
TSPAN3-210ENST00000561277 EEPD1Q7L9B9 569 aa23.07■■□□□ 1.28
TSPAN3-210ENST00000561277 RGS22Q8NE09 1264 aa23.07■■□□□ 1.28
TSPAN3-210ENST00000561277 UPF3BQ9BZI7 483 aaKnown RBP23.07■■□□□ 1.28
TSPAN3-210ENST00000561277 SEC63Q9UGP8 760 aaKnown RBP23.07■■□□□ 1.28
TSPAN3-210ENST00000561277 RARBP10826 455 aa23.06■■□□□ 1.28
TSPAN3-210ENST00000561277 MNX1P50219 401 aaPredicted RBP23.06■■□□□ 1.28
TSPAN3-210ENST00000561277 NECAB2Q7Z6G3 386 aa23.06■■□□□ 1.28
TSPAN3-210ENST00000561277 RBM28Q9NW13 759 aaKnown RBP23.06■■□□□ 1.28
TSPAN3-210ENST00000561277 FAM184BQ9ULE4 1060 aa23.06■■□□□ 1.28
TSPAN3-210ENST00000561277 CYP46A1Q9Y6A2 500 aa23.06■■□□□ 1.28
TSPAN3-210ENST00000561277 LRRC37A2A6NM11 1700 aa23.06■■□□□ 1.28
TSPAN3-210ENST00000561277 hCG_1642624A0A1W2PR95 340 aa23.06■■□□□ 1.28
TSPAN3-210ENST00000561277 OPLAHO14841 1288 aa23.06■■□□□ 1.28
TSPAN3-210ENST00000561277 SEC24BO95487 1268 aa23.06■■□□□ 1.28
TSPAN3-210ENST00000561277 SMARCA1P28370 1054 aa23.06■■□□□ 1.28
TSPAN3-210ENST00000561277 TRAF1Q13077 416 aa23.06■■□□□ 1.28
TSPAN3-210ENST00000561277 FBXO16Q8IX29 292 aaPredicted RBP23.06■■□□□ 1.28
TSPAN3-210ENST00000561277 KATNBL1Q9H079 304 aa23.06■■□□□ 1.28
TSPAN3-210ENST00000561277 ZSWIM6Q9HCJ5 1215 aa23.06■■□□□ 1.28
TSPAN3-210ENST00000561277 XPNPEP3Q9NQH7 507 aa23.06■■□□□ 1.28
TSPAN3-210ENST00000561277 CCDC144BQ3MJ40 725 aa23.05■■□□□ 1.28
TSPAN3-210ENST00000561277 GJC2Q5T442 439 aaPredicted RBP23.05■■□□□ 1.28
TSPAN3-210ENST00000561277 SYTL5Q8TDW5 730 aaPredicted RBP23.05■■□□□ 1.28
TSPAN3-210ENST00000561277 C11orf49Q9H6J7 331 aa23.05■■□□□ 1.28
TSPAN3-210ENST00000561277 COL20A1Q9P218 1284 aa23.05■■□□□ 1.28
TSPAN3-210ENST00000561277 PDE4DIPQ5VU43 2346 aa23.04■■□□□ 1.28
TSPAN3-210ENST00000561277 METAP2P50579 478 aaKnown RBP eCLIP23.04■■□□□ 1.28
TSPAN3-210ENST00000561277 DNERQ8NFT8 737 aa23.04■■□□□ 1.28
TSPAN3-210ENST00000561277 TM6SF1Q9BZW5 370 aa23.04■■□□□ 1.28
TSPAN3-210ENST00000561277 EIF5BO60841 1220 aaKnown RBP23.03■■□□□ 1.28
TSPAN3-210ENST00000561277 PGK1P00558 417 aa23.03■■□□□ 1.28
TSPAN3-210ENST00000561277 HOXA13P31271 388 aaPredicted RBP23.03■■□□□ 1.28
TSPAN3-210ENST00000561277 MORC4Q8TE76 937 aa23.03■■□□□ 1.28
TSPAN3-210ENST00000561277 TAAR1Q96RJ0 339 aa23.03■■□□□ 1.28
TSPAN3-210ENST00000561277 HTATIP2Q9BUP3 242 aa23.03■■□□□ 1.28
TSPAN3-210ENST00000561277 AGXT2Q9BYV1 514 aa23.03■■□□□ 1.28
TSPAN3-210ENST00000561277 CNTNAP5Q8WYK1 1306 aa23.03■■□□□ 1.28
TSPAN3-210ENST00000561277 DNM1LO00429 736 aa23.02■■□□□ 1.28
TSPAN3-210ENST00000561277 ADCY6O43306 1168 aa23.02■■□□□ 1.28
TSPAN3-210ENST00000561277 CDC27P30260 824 aa23.02■■□□□ 1.28
TSPAN3-210ENST00000561277 ADCYAP1R1P41586 468 aa23.02■■□□□ 1.28
TSPAN3-210ENST00000561277 PDE4DQ08499 809 aa23.02■■□□□ 1.28
TSPAN3-210ENST00000561277 FBXL16Q8N461 479 aa23.02■■□□□ 1.28
TSPAN3-210ENST00000561277 ARRDC4Q8NCT1 418 aa23.02■■□□□ 1.28
TSPAN3-210ENST00000561277 MPHOSPH6Q99547 160 aaKnown RBP23.02■■□□□ 1.28
TSPAN3-210ENST00000561277 MAF1Q9H063 256 aa23.02■■□□□ 1.28
TSPAN3-210ENST00000561277 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.01■■□□□ 1.27
TSPAN3-210ENST00000561277 KBTBD13C9JR72 458 aa23.01■■□□□ 1.27
TSPAN3-210ENST00000561277 HSD17B4P51659 736 aa23.01■■□□□ 1.27
TSPAN3-210ENST00000561277 RCAN1P53805 252 aa23.01■■□□□ 1.27
TSPAN3-210ENST00000561277 DPF3Q92784 378 aa23.01■■□□□ 1.27
TSPAN3-210ENST00000561277 RMDN3Q96TC7 470 aa23.01■■□□□ 1.27
TSPAN3-210ENST00000561277 VTA1Q9NP79 307 aa23.01■■□□□ 1.27
TSPAN3-210ENST00000561277 PDGFCQ9NRA1 345 aa23.01■■□□□ 1.27
TSPAN3-210ENST00000561277 DNAH12Q6ZR08 3092 aa23.01■■□□□ 1.27
TSPAN3-210ENST00000561277 LOC102724159A0A0B4J2E5 919 aa23.01■■□□□ 1.27
TSPAN3-210ENST00000561277 EIF2AK2P19525 551 aaKnown RBP23.01■■□□□ 1.27
TSPAN3-210ENST00000561277 TOB2Q14106 344 aaPredicted RBP23.01■■□□□ 1.27
TSPAN3-210ENST00000561277 PWP2Q15269 919 aaKnown RBP23.01■■□□□ 1.27
TSPAN3-210ENST00000561277 LRRC41Q15345 812 aa23.01■■□□□ 1.27
TSPAN3-210ENST00000561277 C8orf34Q49A92 452 aa23.01■■□□□ 1.27
TSPAN3-210ENST00000561277 ARHGEF16Q5VV41 709 aa23.01■■□□□ 1.27
TSPAN3-210ENST00000561277 NOL8Q76FK4 1167 aaKnown RBP23.01■■□□□ 1.27
TSPAN3-210ENST00000561277 FAM217BQ9NTX9 383 aaPredicted RBP23.01■■□□□ 1.27
TSPAN3-210ENST00000561277 PDRG1Q9NUG6 133 aa23.01■■□□□ 1.27
TSPAN3-210ENST00000561277 SYNRGQ9UMZ2 1314 aa23■■□□□ 1.27
TSPAN3-210ENST00000561277 GCOM1H8Y6P7 765 aaPredicted RBP23■■□□□ 1.27
TSPAN3-210ENST00000561277 POLR2MP0CAP2 368 aa23■■□□□ 1.27
TSPAN3-210ENST00000561277 EDNRBP24530 442 aa23■■□□□ 1.27
TSPAN3-210ENST00000561277 ADD1P35611 737 aaKnown RBP23■■□□□ 1.27
TSPAN3-210ENST00000561277 ANAPC15P60006 121 aa23■■□□□ 1.27
TSPAN3-210ENST00000561277 GHRHRQ02643 423 aa23■■□□□ 1.27
TSPAN3-210ENST00000561277 TNFAIP2Q03169 654 aa23■■□□□ 1.27
TSPAN3-210ENST00000561277 RNF180Q86T96 592 aa23■■□□□ 1.27
TSPAN3-210ENST00000561277 NSUN6Q8TEA1 469 aaKnown RBP23■■□□□ 1.27
TSPAN3-210ENST00000561277 LARP6Q9BRS8 491 aaKnown RBP23■■□□□ 1.27
TSPAN3-210ENST00000561277 SENP6Q9GZR1 1112 aaPredicted RBP23■■□□□ 1.27
TSPAN3-210ENST00000561277 CCDC196A0A1B0GTZ2 297 aa22.99■■□□□ 1.27
TSPAN3-210ENST00000561277 B4DLN1 442 aa22.99■■□□□ 1.27
TSPAN3-210ENST00000561277 DUSP11O75319 330 aaKnown RBP22.99■■□□□ 1.27
TSPAN3-210ENST00000561277 COL6A1P12109 1028 aa22.99■■□□□ 1.27
TSPAN3-210ENST00000561277 PTGS1P23219 599 aa22.99■■□□□ 1.27
TSPAN3-210ENST00000561277 MRPL12P52815 198 aaKnown RBP22.99■■□□□ 1.27
TSPAN3-210ENST00000561277 FUT2Q10981 343 aa22.99■■□□□ 1.27
TSPAN3-210ENST00000561277 TAPT1Q6NXT6 567 aa22.99■■□□□ 1.27
TSPAN3-210ENST00000561277 HEATR3Q7Z4Q2 680 aa22.99■■□□□ 1.27
TSPAN3-210ENST00000561277 FCHSD1Q86WN1 690 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms