RNA–Protein interactions for RNA: ENST00000560952.1

RNF111-211, Transcript of ring finger protein 111, humanhuman

TSL 1 (best)

Gene RNF111, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-211ENST00000560952 DNTTIP2Q5QJE6 756 aaKnown RBP3.02□□□□□ -1.93
RNF111-211ENST00000560952 LARP1BQ659C4 914 aaKnown RBP3.02□□□□□ -1.93
RNF111-211ENST00000560952 OVOS1Q6IE37 1185 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 CCDC70Q6NSX1 233 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 GK5Q6ZS86 529 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 CREG2Q8IUH2 290 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 SPPL2CQ8IUH8 684 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 RAVER1Q8IY67 606 aaKnown RBP3.02□□□□□ -1.93
RNF111-211ENST00000560952 LILRA2Q8N149 483 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 OR6P1Q8NGX9 317 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 SYTL5Q8TDW5 730 aaPredicted RBP3.02□□□□□ -1.93
RNF111-211ENST00000560952 RUNDC1Q96C34 613 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 SLC39A13Q96H72 371 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 Q96M66 194 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 FERD3LQ96RJ6 166 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 DUSP15Q9H1R2 295 aaPredicted RBP3.02□□□□□ -1.93
RNF111-211ENST00000560952 ALDH8A1Q9H2A2 487 aaPredicted RBP3.02□□□□□ -1.93
RNF111-211ENST00000560952 RANBP17Q9H2T7 1088 aaKnown RBP3.02□□□□□ -1.93
RNF111-211ENST00000560952 CHST12Q9NRB3 414 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 UBP1Q9NZI7 540 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 LZTS1Q9Y250 596 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 SLC45A1Q9Y2W3 748 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 SSU72P8A0A1W2PR75 194 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 IFRD1O00458 451 aaPredicted RBP3.02□□□□□ -1.93
RNF111-211ENST00000560952 FARP2O94887 1054 aaPredicted RBP3.02□□□□□ -1.93
RNF111-211ENST00000560952 PDGFRBP09619 1106 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 NME1P15531 152 aaKnown RBP3.02□□□□□ -1.93
RNF111-211ENST00000560952 HSD3B2P26439 372 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 LTKP29376 864 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 GNALP38405 381 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 CD96P40200 585 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 NAP1L1P55209 391 aaKnown RBP3.02□□□□□ -1.93
RNF111-211ENST00000560952 CHRNEQ04844 493 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 CDC37Q16543 378 aaPredicted RBP3.02□□□□□ -1.93
RNF111-211ENST00000560952 GAB4Q2WGN9 574 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 RNF111Q6ZNA4 994 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 WDR75Q8IWA0 830 aaKnown RBP3.02□□□□□ -1.93
RNF111-211ENST00000560952 CHCHD4Q8N4Q1 142 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 ZNF655Q8N720 491 aaPredicted RBP3.02□□□□□ -1.93
RNF111-211ENST00000560952 RBBP8NLQ8NC74 664 aaPredicted RBP3.02□□□□□ -1.93
RNF111-211ENST00000560952 LSM14AQ8ND56 463 aaKnown RBP3.02□□□□□ -1.93
RNF111-211ENST00000560952 BHLHE22Q8NFJ8 381 aaPredicted RBP3.02□□□□□ -1.93
RNF111-211ENST00000560952 ATG4CQ96DT6 458 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 KIRREL1Q96J84 757 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 EAF1Q96JC9 268 aaPredicted RBP3.02□□□□□ -1.93
RNF111-211ENST00000560952 C8orf48Q96LL4 319 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 CFAP53Q96M91 514 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 SLC38A3Q99624 504 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 TM9SF2Q99805 663 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.02□□□□□ -1.93
RNF111-211ENST00000560952 TMEM59LQ9UK28 342 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 ADAMTS6Q9UKP5 1117 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 ZNRF3Q9ULT6 936 aa3.02□□□□□ -1.93
RNF111-211ENST00000560952 CNTNAP4Q9C0A0 1308 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 ERICH4A6NGS2 130 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 COQ9O75208 318 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 GLI1P08151 1106 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 VIL1P09327 827 aaKnown RBP3.01□□□□□ -1.93
RNF111-211ENST00000560952 U2AF1L5P0DN76 240 aaPredicted RBP3.01□□□□□ -1.93
RNF111-211ENST00000560952 COL6A1P12109 1028 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 KCNA2P16389 499 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 CASQ1P31415 396 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 U2AF1Q01081 240 aaKnown RBP eCLIP3.01□□□□□ -1.93
RNF111-211ENST00000560952 AMPD3Q01432 767 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 EGR3Q06889 387 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 SIM2Q14190 667 aaPredicted RBP3.01□□□□□ -1.93
RNF111-211ENST00000560952 BBS9Q3SYG4 887 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 CCDC93Q567U6 631 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 TMEM67Q5HYA8 995 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 GJC2Q5T442 439 aaPredicted RBP3.01□□□□□ -1.93
RNF111-211ENST00000560952 C10orf62Q5T681 223 aaPredicted RBP3.01□□□□□ -1.93
RNF111-211ENST00000560952 MFSD4BQ5TF39 518 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 KRT77Q7Z794 578 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 DAGLBQ8NCG7 672 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 PDZD8Q8NEN9 1154 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 CRBNQ96SW2 442 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 PPP1R16BQ96T49 567 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 IER2Q9BTL4 223 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 TMPRSS5Q9H3S3 457 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 SLAMF8Q9P0V8 285 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 DDX41Q9UJV9 622 aaKnown RBP3.01□□□□□ -1.93
RNF111-211ENST00000560952 HDAC9Q9UKV0 1011 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 THRAP3Q9Y2W1 955 aaKnown RBP3.01□□□□□ -1.93
RNF111-211ENST00000560952 FITM1A5D6W6 292 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 IPO5O00410 1097 aaKnown RBP3.01□□□□□ -1.93
RNF111-211ENST00000560952 MPHOSPH10O00566 681 aaKnown RBP3.01□□□□□ -1.93
RNF111-211ENST00000560952 DNAJC6O75061 913 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 RNASEH2AO75792 299 aaKnown RBP3.01□□□□□ -1.93
RNF111-211ENST00000560952 MTA2O94776 668 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 ESR1P03372 595 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 DNAJA1P31689 397 aaKnown RBP3.01□□□□□ -1.93
RNF111-211ENST00000560952 CRKP46108 304 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 CD151P48509 253 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 CLK1P49759 484 aaKnown RBP3.01□□□□□ -1.93
RNF111-211ENST00000560952 PCBP3P57721 371 aaKnown RBP3.01□□□□□ -1.93
RNF111-211ENST00000560952 CLCQ05315 142 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 NMIQ13287 307 aaPredicted RBP3.01□□□□□ -1.93
RNF111-211ENST00000560952 NFE2L2Q16236 605 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 LDLRAD1Q5T700 205 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 NBPF12Q5TAG4 269 aaPredicted RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms