RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 SPC25Q9HBM1 224 aa14.6□□□□□ -0.07
SMAD3-208ENST00000558827 STARD7Q9NQZ5 370 aa14.6□□□□□ -0.07
SMAD3-208ENST00000558827 MAD2L2Q9UI95 211 aa14.6□□□□□ -0.07
SMAD3-208ENST00000558827 MYH6P13533 1939 aa14.6□□□□□ -0.07
SMAD3-208ENST00000558827 ERICH2A1L162 156 aa14.59□□□□□ -0.07
SMAD3-208ENST00000558827 SLC27A2O14975 620 aa14.59□□□□□ -0.07
SMAD3-208ENST00000558827 CTAGE5O15320 804 aa14.59□□□□□ -0.07
SMAD3-208ENST00000558827 GJA9P57773 515 aa14.59□□□□□ -0.07
SMAD3-208ENST00000558827 CCSAPQ6IQ19 270 aaPredicted RBP14.59□□□□□ -0.07
SMAD3-208ENST00000558827 CXCL17Q6UXB2 119 aa14.59□□□□□ -0.07
SMAD3-208ENST00000558827 MB21D2Q8IYB1 491 aaPredicted RBP14.59□□□□□ -0.07
SMAD3-208ENST00000558827 COPS5Q92905 334 aa14.59□□□□□ -0.07
SMAD3-208ENST00000558827 BADQ92934 168 aa14.59□□□□□ -0.07
SMAD3-208ENST00000558827 AP5M1Q9H0R1 490 aa14.59□□□□□ -0.07
SMAD3-208ENST00000558827 PDLIM7Q9NR12 457 aa14.59□□□□□ -0.07
SMAD3-208ENST00000558827 ADD3Q9UEY8 706 aaKnown RBP14.59□□□□□ -0.07
SMAD3-208ENST00000558827 WDR19Q8NEZ3 1342 aa14.59□□□□□ -0.07
SMAD3-208ENST00000558827 PALM3A6NDB9 673 aaPredicted RBP14.58□□□□□ -0.08
SMAD3-208ENST00000558827 PRC1O43663 620 aa14.58□□□□□ -0.08
SMAD3-208ENST00000558827 PPP1R11O60927 126 aaPredicted RBP14.58□□□□□ -0.08
SMAD3-208ENST00000558827 RXRAP19793 462 aa14.58□□□□□ -0.08
SMAD3-208ENST00000558827 ITGB8P26012 769 aa14.58□□□□□ -0.08
SMAD3-208ENST00000558827 PDE4DQ08499 809 aa14.58□□□□□ -0.08
SMAD3-208ENST00000558827 GRM4Q14833 912 aa14.58□□□□□ -0.08
SMAD3-208ENST00000558827 SNX17Q15036 470 aa14.58□□□□□ -0.08
SMAD3-208ENST00000558827 CREB3L3Q68CJ9 461 aa14.58□□□□□ -0.08
SMAD3-208ENST00000558827 TLK2Q86UE8 772 aa14.58□□□□□ -0.08
SMAD3-208ENST00000558827 ZFP91Q96JP5 570 aaPredicted RBP14.58□□□□□ -0.08
SMAD3-208ENST00000558827 GLT1D1Q96MS3 346 aa14.58□□□□□ -0.08
SMAD3-208ENST00000558827 PIGSQ96S52 555 aa14.58□□□□□ -0.08
SMAD3-208ENST00000558827 TSEN34Q9BSV6 310 aaKnown RBP14.58□□□□□ -0.08
SMAD3-208ENST00000558827 WDR11Q9BZH6 1224 aa14.58□□□□□ -0.08
SMAD3-208ENST00000558827 UPF3AQ9H1J1 476 aaKnown RBP14.58□□□□□ -0.08
SMAD3-208ENST00000558827 COL20A1Q9P218 1284 aa14.58□□□□□ -0.08
SMAD3-208ENST00000558827 GNEQ9Y223 722 aaKnown RBP14.58□□□□□ -0.08
SMAD3-208ENST00000558827 ABCB11O95342 1321 aa14.58□□□□□ -0.08
SMAD3-208ENST00000558827 CFBP00751 764 aa14.57□□□□□ -0.08
SMAD3-208ENST00000558827 BMP8BP34820 402 aa14.57□□□□□ -0.08
SMAD3-208ENST00000558827 NT5C2P49902 561 aa14.57□□□□□ -0.08
SMAD3-208ENST00000558827 PSMC6P62333 389 aa14.57□□□□□ -0.08
SMAD3-208ENST00000558827 SART3Q15020 963 aaKnown RBP14.57□□□□□ -0.08
SMAD3-208ENST00000558827 FSCN1Q16658 493 aaKnown RBP14.57□□□□□ -0.08
SMAD3-208ENST00000558827 BMP2KLQ5H9B9 411 aa14.57□□□□□ -0.08
SMAD3-208ENST00000558827 IQSEC1Q6DN90 963 aa14.57□□□□□ -0.08
SMAD3-208ENST00000558827 NFXL1Q6ZNB6 911 aa14.57□□□□□ -0.08
SMAD3-208ENST00000558827 PCSK9Q8NBP7 692 aaKnown RBP14.57□□□□□ -0.08
SMAD3-208ENST00000558827 SYTL5Q8TDW5 730 aaPredicted RBP14.57□□□□□ -0.08
SMAD3-208ENST00000558827 IGDCC4Q8TDY8 1250 aa14.57□□□□□ -0.08
SMAD3-208ENST00000558827 VTA1Q9NP79 307 aa14.57□□□□□ -0.08
SMAD3-208ENST00000558827 TMEM39AQ9NV64 488 aa14.57□□□□□ -0.08
SMAD3-208ENST00000558827 MOXD2PA6NHM9 499 aa14.56□□□□□ -0.08
SMAD3-208ENST00000558827 CLTBP09497 229 aa14.56□□□□□ -0.08
SMAD3-208ENST00000558827 EIF2AK2P19525 551 aaKnown RBP14.56□□□□□ -0.08
SMAD3-208ENST00000558827 CHMP4BP1P59074 171 aa14.56□□□□□ -0.08
SMAD3-208ENST00000558827 CASC1Q6TDU7 716 aa14.56□□□□□ -0.08
SMAD3-208ENST00000558827 SEPT14Q6ZU15 432 aa14.56□□□□□ -0.08
SMAD3-208ENST00000558827 CATIPQ7Z7H3 387 aa14.56□□□□□ -0.08
SMAD3-208ENST00000558827 TDHQ8IZJ6 230 aa14.56□□□□□ -0.08
SMAD3-208ENST00000558827 CMTR1Q8N1G2 835 aaKnown RBP14.56□□□□□ -0.08
SMAD3-208ENST00000558827 MORC4Q8TE76 937 aa14.56□□□□□ -0.08
SMAD3-208ENST00000558827 TCEANC2Q96MN5 208 aa14.56□□□□□ -0.08
SMAD3-208ENST00000558827 LY9Q9HBG7 655 aa14.56□□□□□ -0.08
SMAD3-208ENST00000558827 MRPL11Q9Y3B7 192 aaKnown RBP14.56□□□□□ -0.08
SMAD3-208ENST00000558827 LRRC37A2A6NM11 1700 aa14.55□□□□□ -0.08
SMAD3-208ENST00000558827 CYTH3O43739 400 aa14.55□□□□□ -0.08
SMAD3-208ENST00000558827 SORBS3O60504 671 aa14.55□□□□□ -0.08
SMAD3-208ENST00000558827 MYL3P08590 195 aa14.55□□□□□ -0.08
SMAD3-208ENST00000558827 CST5P28325 142 aaPredicted RBP14.55□□□□□ -0.08
SMAD3-208ENST00000558827 HOXA13P31271 388 aaPredicted RBP14.55□□□□□ -0.08
SMAD3-208ENST00000558827 FAAP100Q0VG06 881 aa14.55□□□□□ -0.08
SMAD3-208ENST00000558827 TROAPQ12815 778 aa14.55□□□□□ -0.08
SMAD3-208ENST00000558827 NECTIN1Q15223 517 aa14.55□□□□□ -0.08
SMAD3-208ENST00000558827 C9orf50Q5SZB4 431 aa14.55□□□□□ -0.08
SMAD3-208ENST00000558827 ZNF654Q8IZM8 581 aa14.55□□□□□ -0.08
SMAD3-208ENST00000558827 OR6J1Q8NGC5 347 aa14.55□□□□□ -0.08
SMAD3-208ENST00000558827 RMDN3Q96TC7 470 aa14.55□□□□□ -0.08
SMAD3-208ENST00000558827 AMNQ9BXJ7 453 aa14.55□□□□□ -0.08
SMAD3-208ENST00000558827 PNMA2Q9UL42 364 aa14.55□□□□□ -0.08
SMAD3-208ENST00000558827 PCDHA1Q9Y5I3 950 aa14.55□□□□□ -0.08
SMAD3-208ENST00000558827 SZT2Q5T011 3432 aa14.54□□□□□ -0.08
SMAD3-208ENST00000558827 hCG_1642624A0A1W2PR95 340 aa14.54□□□□□ -0.08
SMAD3-208ENST00000558827 DCDC2CA8MYV0 355 aa14.54□□□□□ -0.08
SMAD3-208ENST00000558827 ARVCFO00192 962 aa14.54□□□□□ -0.08
SMAD3-208ENST00000558827 OPLAHO14841 1288 aa14.54□□□□□ -0.08
SMAD3-208ENST00000558827 ZBTB5O15062 677 aa14.54□□□□□ -0.08
SMAD3-208ENST00000558827 CDC45O75419 566 aa14.54□□□□□ -0.08
SMAD3-208ENST00000558827 ARIH2O95376 493 aa14.54□□□□□ -0.08
SMAD3-208ENST00000558827 MYCLP12524 364 aaPredicted RBP14.54□□□□□ -0.08
SMAD3-208ENST00000558827 RAG1P15918 1043 aa14.54□□□□□ -0.08
SMAD3-208ENST00000558827 MCM5P33992 734 aa14.54□□□□□ -0.08
SMAD3-208ENST00000558827 EPHB4P54760 987 aa14.54□□□□□ -0.08
SMAD3-208ENST00000558827 SHHQ15465 462 aa14.54□□□□□ -0.08
SMAD3-208ENST00000558827 DUSP28Q4G0W2 176 aa14.54□□□□□ -0.08
SMAD3-208ENST00000558827 ARHGEF16Q5VV41 709 aa14.54□□□□□ -0.08
SMAD3-208ENST00000558827 Q7L0L9 218 aa14.54□□□□□ -0.08
SMAD3-208ENST00000558827 FCHSD1Q86WN1 690 aa14.54□□□□□ -0.08
SMAD3-208ENST00000558827 CCDC82Q8N4S0 544 aa14.54□□□□□ -0.08
SMAD3-208ENST00000558827 GRIN2DO15399 1336 aa14.53□□□□□ -0.08
SMAD3-208ENST00000558827 A0A0U1RQG5 324 aaPredicted RBP14.53□□□□□ -0.08
SMAD3-208ENST00000558827 A0A1W2PPC1 479 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms