RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 SPZ1Q9BXG8 430 aa10.38□□□□□ -0.75
SPG11-207ENST00000558138 ABHD16BQ9H3Z7 469 aa10.38□□□□□ -0.75
SPG11-207ENST00000558138 RIOX1Q9H6W3 641 aa10.38□□□□□ -0.75
SPG11-207ENST00000558138 SPC25Q9HBM1 224 aa10.38□□□□□ -0.75
SPG11-207ENST00000558138 NRBP1Q9UHY1 535 aa10.38□□□□□ -0.75
SPG11-207ENST00000558138 BRPF3Q9ULD4 1205 aa10.38□□□□□ -0.75
SPG11-207ENST00000558138 FAM184BQ9ULE4 1060 aa10.38□□□□□ -0.75
SPG11-207ENST00000558138 HTTP42858 3142 aa10.38□□□□□ -0.75
SPG11-207ENST00000558138 KIAA0100Q14667 2235 aaKnown RBP10.38□□□□□ -0.75
SPG11-207ENST00000558138 hCG_1642624A0A1W2PR95 340 aa10.37□□□□□ -0.75
SPG11-207ENST00000558138 SOWAHBA6NEL2 793 aa10.37□□□□□ -0.75
SPG11-207ENST00000558138 GCOM1H8Y6P7 765 aaPredicted RBP10.37□□□□□ -0.75
SPG11-207ENST00000558138 CPLX1O14810 134 aa10.37□□□□□ -0.75
SPG11-207ENST00000558138 CYTH3O43739 400 aa10.37□□□□□ -0.75
SPG11-207ENST00000558138 POLR2MP0CAP2 368 aa10.37□□□□□ -0.75
SPG11-207ENST00000558138 CAPN2P17655 700 aa10.37□□□□□ -0.75
SPG11-207ENST00000558138 CCT2P78371 535 aaKnown RBP10.37□□□□□ -0.75
SPG11-207ENST00000558138 STK3Q13188 491 aa10.37□□□□□ -0.75
SPG11-207ENST00000558138 NECAB2Q7Z6G3 386 aa10.37□□□□□ -0.75
SPG11-207ENST00000558138 FCHSD1Q86WN1 690 aa10.37□□□□□ -0.75
SPG11-207ENST00000558138 FBXO16Q8IX29 292 aaPredicted RBP10.37□□□□□ -0.75
SPG11-207ENST00000558138 ARRDC4Q8NCT1 418 aa10.37□□□□□ -0.75
SPG11-207ENST00000558138 C11orf49Q9H6J7 331 aa10.37□□□□□ -0.75
SPG11-207ENST00000558138 ZSWIM6Q9HCJ5 1215 aa10.37□□□□□ -0.75
SPG11-207ENST00000558138 XPNPEP3Q9NQH7 507 aa10.37□□□□□ -0.75
SPG11-207ENST00000558138 BAZ2BQ9UIF8 2168 aaKnown RBP10.36□□□□□ -0.75
SPG11-207ENST00000558138 PPP1R11O60927 126 aaPredicted RBP10.36□□□□□ -0.75
SPG11-207ENST00000558138 SNAI1O95863 264 aaPredicted RBP10.36□□□□□ -0.75
SPG11-207ENST00000558138 EIF2AK2P19525 551 aaKnown RBP10.36□□□□□ -0.75
SPG11-207ENST00000558138 SMARCA1P28370 1054 aa10.36□□□□□ -0.75
SPG11-207ENST00000558138 HOXA13P31271 388 aaPredicted RBP10.36□□□□□ -0.75
SPG11-207ENST00000558138 RGS19P49795 217 aa10.36□□□□□ -0.75
SPG11-207ENST00000558138 NAPAP54920 295 aa10.36□□□□□ -0.75
SPG11-207ENST00000558138 ANAPC15P60006 121 aa10.36□□□□□ -0.75
SPG11-207ENST00000558138 GJC2Q5T442 439 aaPredicted RBP10.36□□□□□ -0.75
SPG11-207ENST00000558138 CPLX2Q6PUV4 134 aaKnown RBP10.36□□□□□ -0.75
SPG11-207ENST00000558138 MAMDC4Q6UXC1 1216 aa10.36□□□□□ -0.75
SPG11-207ENST00000558138 RNF180Q86T96 592 aa10.36□□□□□ -0.75
SPG11-207ENST00000558138 ANKLE1Q8NAG6 615 aa10.36□□□□□ -0.75
SPG11-207ENST00000558138 DNERQ8NFT8 737 aa10.36□□□□□ -0.75
SPG11-207ENST00000558138 NSUN6Q8TEA1 469 aaKnown RBP10.36□□□□□ -0.75
SPG11-207ENST00000558138 DIS3LQ8TF46 1054 aaKnown RBP10.36□□□□□ -0.75
SPG11-207ENST00000558138 GPKOWQ92917 476 aaPredicted RBP eCLIP10.36□□□□□ -0.75
SPG11-207ENST00000558138 LENG1Q96BZ8 264 aaPredicted RBP10.36□□□□□ -0.75
SPG11-207ENST00000558138 MTMR8Q96EF0 704 aa10.36□□□□□ -0.75
SPG11-207ENST00000558138 PAWRQ96IZ0 340 aaKnown RBP10.36□□□□□ -0.75
SPG11-207ENST00000558138 RMDN3Q96TC7 470 aa10.36□□□□□ -0.75
SPG11-207ENST00000558138 LARP6Q9BRS8 491 aaKnown RBP10.36□□□□□ -0.75
SPG11-207ENST00000558138 TM6SF1Q9BZW5 370 aa10.36□□□□□ -0.75
SPG11-207ENST00000558138 VTA1Q9NP79 307 aa10.36□□□□□ -0.75
SPG11-207ENST00000558138 OGDHLQ9ULD0 1010 aa10.36□□□□□ -0.75
SPG11-207ENST00000558138 DDX49Q9Y6V7 483 aaKnown RBP10.36□□□□□ -0.75
SPG11-207ENST00000558138 SMCHD1A6NHR9 2005 aa10.36□□□□□ -0.75
SPG11-207ENST00000558138 CENPFP49454 3210 aa10.35□□□□□ -0.75
SPG11-207ENST00000558138 CNTNAP5Q8WYK1 1306 aa10.35□□□□□ -0.75
SPG11-207ENST00000558138 SEC24BO95487 1268 aa10.35□□□□□ -0.75
SPG11-207ENST00000558138 PGK1P00558 417 aa10.35□□□□□ -0.75
SPG11-207ENST00000558138 C6orf222P0C671 652 aaPredicted RBP10.35□□□□□ -0.75
SPG11-207ENST00000558138 ZNF865P0CJ78 1059 aaPredicted RBP10.35□□□□□ -0.75
SPG11-207ENST00000558138 MYCLP12524 364 aaPredicted RBP10.35□□□□□ -0.75
SPG11-207ENST00000558138 RCAN1P53805 252 aa10.35□□□□□ -0.75
SPG11-207ENST00000558138 PPP2R5BQ15173 497 aa10.35□□□□□ -0.75
SPG11-207ENST00000558138 ANKRD1Q15327 319 aa10.35□□□□□ -0.75
SPG11-207ENST00000558138 CCDC144BQ3MJ40 725 aa10.35□□□□□ -0.75
SPG11-207ENST00000558138 TRIM22Q8IYM9 498 aa10.35□□□□□ -0.75
SPG11-207ENST00000558138 RGS22Q8NE09 1264 aa10.35□□□□□ -0.75
SPG11-207ENST00000558138 SYTL5Q8TDW5 730 aaPredicted RBP10.35□□□□□ -0.75
SPG11-207ENST00000558138 TBC1D5Q92609 795 aa10.35□□□□□ -0.75
SPG11-207ENST00000558138 VTI1AQ96AJ9 217 aa10.35□□□□□ -0.75
SPG11-207ENST00000558138 FGD4Q96M96 766 aa10.35□□□□□ -0.75
SPG11-207ENST00000558138 TAAR1Q96RJ0 339 aa10.35□□□□□ -0.75
SPG11-207ENST00000558138 CRISPLD2Q9H0B8 497 aa10.35□□□□□ -0.75
SPG11-207ENST00000558138 AP5M1Q9H0R1 490 aa10.35□□□□□ -0.75
SPG11-207ENST00000558138 V9GY48 417 aaPredicted RBP10.35□□□□□ -0.75
SPG11-207ENST00000558138 MCM3APO60318 1980 aa10.35□□□□□ -0.75
SPG11-207ENST00000558138 LOC102724159A0A0B4J2E5 919 aa10.34□□□□□ -0.75
SPG11-207ENST00000558138 DNM1LO00429 736 aa10.34□□□□□ -0.75
SPG11-207ENST00000558138 EVI5O60447 810 aa10.34□□□□□ -0.75
SPG11-207ENST00000558138 PPFIA3O75145 1194 aa10.34□□□□□ -0.75
SPG11-207ENST00000558138 CDC27P30260 824 aa10.34□□□□□ -0.75
SPG11-207ENST00000558138 ADD1P35611 737 aaKnown RBP10.34□□□□□ -0.75
SPG11-207ENST00000558138 ADCYAP1R1P41586 468 aa10.34□□□□□ -0.75
SPG11-207ENST00000558138 TNFAIP2Q03169 654 aa10.34□□□□□ -0.75
SPG11-207ENST00000558138 PWP2Q15269 919 aaKnown RBP10.34□□□□□ -0.75
SPG11-207ENST00000558138 STXBP2Q15833 593 aa10.34□□□□□ -0.75
SPG11-207ENST00000558138 SLC35G1Q2M3R5 365 aa10.34□□□□□ -0.75
SPG11-207ENST00000558138 C8orf34Q49A92 452 aa10.34□□□□□ -0.75
SPG11-207ENST00000558138 LHX8Q68G74 356 aa10.34□□□□□ -0.75
SPG11-207ENST00000558138 SEPT14Q6ZU15 432 aa10.34□□□□□ -0.75
SPG11-207ENST00000558138 SLC26A6Q9BXS9 759 aa10.34□□□□□ -0.75
SPG11-207ENST00000558138 SENP6Q9GZR1 1112 aaPredicted RBP10.34□□□□□ -0.75
SPG11-207ENST00000558138 MAF1Q9H063 256 aa10.34□□□□□ -0.75
SPG11-207ENST00000558138 SLKQ9H2G2 1235 aaPredicted RBP10.34□□□□□ -0.75
SPG11-207ENST00000558138 PSTPIP2Q9H939 334 aa10.34□□□□□ -0.75
SPG11-207ENST00000558138 EHMT1Q9H9B1 1298 aa10.34□□□□□ -0.75
SPG11-207ENST00000558138 NCOA5Q9HCD5 579 aaKnown RBP10.34□□□□□ -0.75
SPG11-207ENST00000558138 MAP3K20Q9NYL2 800 aaKnown RBP10.34□□□□□ -0.75
SPG11-207ENST00000558138 RBM27Q9P2N5 1060 aaKnown RBP10.34□□□□□ -0.75
SPG11-207ENST00000558138 FRMPD3Q5JV73 1810 aa10.34□□□□□ -0.75
SPG11-207ENST00000558138 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms