RNA–Protein interactions for RNA: ENST00000555774.5

SHMT2-222, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,311 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-222ENST00000555774 PTF1AQ7RTS3 328 aa15.08■□□□□ 0
SHMT2-222ENST00000555774 PLIN2Q99541 437 aa15.08■□□□□ 0
SHMT2-222ENST00000555774 EIF3CQ99613 913 aaKnown RBP15.08■□□□□ 0
SHMT2-222ENST00000555774 C10orf71Q711Q0 1435 aa15.08■□□□□ 0
SHMT2-222ENST00000555774 IPO7O95373 1038 aaKnown RBP15.08■□□□□ 0
SHMT2-222ENST00000555774 ABL1P00519 1130 aa15.08■□□□□ 0
SHMT2-222ENST00000555774 ADRA2BP18089 450 aa15.08■□□□□ 0
SHMT2-222ENST00000555774 TRIM21P19474 475 aaKnown RBP15.08■□□□□ 0
SHMT2-222ENST00000555774 MCM3P25205 808 aa15.08■□□□□ 0
SHMT2-222ENST00000555774 GPSM2P81274 684 aa15.08■□□□□ 0
SHMT2-222ENST00000555774 FKBP15Q5T1M5 1219 aa15.08■□□□□ 0
SHMT2-222ENST00000555774 PAPD7Q5XG87 772 aaKnown RBP15.08■□□□□ 0
SHMT2-222ENST00000555774 WDR93Q6P2C0 686 aa15.08■□□□□ 0
SHMT2-222ENST00000555774 FOXR2Q6PJQ5 311 aa15.08■□□□□ 0
SHMT2-222ENST00000555774 TXLNBQ8N3L3 684 aa15.08■□□□□ 0
SHMT2-222ENST00000555774 TBCKQ8TEA7 893 aa15.08■□□□□ 0
SHMT2-222ENST00000555774 RPGRQ92834 1020 aaKnown RBP15.08■□□□□ 0
SHMT2-222ENST00000555774 PNKPQ96T60 521 aa15.08■□□□□ 0
SHMT2-222ENST00000555774 LRRC27Q9C0I9 530 aa15.08■□□□□ 0
SHMT2-222ENST00000555774 GUCA1BQ9UMX6 200 aa15.08■□□□□ 0
SHMT2-222ENST00000555774 LY75O60449 1722 aa15.07■□□□□ 0
SHMT2-222ENST00000555774 FGFR1OPO95684 399 aaKnown RBP15.07■□□□□ 0
SHMT2-222ENST00000555774 MTIF2P46199 727 aaKnown RBP15.07■□□□□ 0
SHMT2-222ENST00000555774 CKAP4Q07065 602 aaKnown RBP15.07■□□□□ 0
SHMT2-222ENST00000555774 STK4Q13043 487 aa15.07■□□□□ 0
SHMT2-222ENST00000555774 CRY2Q49AN0 593 aa15.07■□□□□ 0
SHMT2-222ENST00000555774 ASPRV1Q53RT3 343 aa15.07■□□□□ 0
SHMT2-222ENST00000555774 ANKRD40Q6AI12 368 aa15.07■□□□□ 0
SHMT2-222ENST00000555774 PPP1R18Q6NYC8 613 aa15.07■□□□□ 0
SHMT2-222ENST00000555774 SV2BQ7L1I2 683 aa15.07■□□□□ 0
SHMT2-222ENST00000555774 MTMR9Q96QG7 549 aa15.07■□□□□ 0
SHMT2-222ENST00000555774 MMTAG2Q9BU76 263 aaKnown RBP15.07■□□□□ 0
SHMT2-222ENST00000555774 RAB34Q9BZG1 259 aa15.07■□□□□ 0
SHMT2-222ENST00000555774 TSGA10Q9BZW7 698 aa15.07■□□□□ 0
SHMT2-222ENST00000555774 PSD3Q9NYI0 1048 aa15.07■□□□□ 0
SHMT2-222ENST00000555774 CALCOCO1Q9P1Z2 691 aa15.07■□□□□ 0
SHMT2-222ENST00000555774 GGA1Q9UJY5 639 aa15.07■□□□□ 0
SHMT2-222ENST00000555774 MTMR7Q9Y216 660 aa15.07■□□□□ 0
SHMT2-222ENST00000555774 THSD7AQ9UPZ6 1657 aa15.07■□□□□ 0
SHMT2-222ENST00000555774 MYH1P12882 1939 aa15.07■□□□□ 0
SHMT2-222ENST00000555774 MYH8P13535 1937 aa15.07■□□□□ 0
SHMT2-222ENST00000555774 TAF1LQ8IZX4 1826 aa15.06■□□□□ 0
SHMT2-222ENST00000555774 ANO9A1A5B4 782 aa15.06■□□□□ 0
SHMT2-222ENST00000555774 POLR3GO15318 223 aaPredicted RBP15.06■□□□□ 0
SHMT2-222ENST00000555774 UFL1O94874 794 aa15.06■□□□□ 0
SHMT2-222ENST00000555774 RHBDL3P58872 404 aa15.06■□□□□ 0
SHMT2-222ENST00000555774 TMEM266Q2M3C6 531 aa15.06■□□□□ 0
SHMT2-222ENST00000555774 CCDC122Q5T0U0 273 aa15.06■□□□□ 0
SHMT2-222ENST00000555774 USP17L2Q6R6M4 530 aa15.06■□□□□ 0
SHMT2-222ENST00000555774 UNC13DQ70J99 1090 aa15.06■□□□□ 0
SHMT2-222ENST00000555774 KIAA1328Q86T90 577 aa15.06■□□□□ 0
SHMT2-222ENST00000555774 JAKMIP2Q96AA8 810 aa15.06■□□□□ 0
SHMT2-222ENST00000555774 CEP95Q96GE4 821 aa15.06■□□□□ 0
SHMT2-222ENST00000555774 PIGSQ96S52 555 aa15.06■□□□□ 0
SHMT2-222ENST00000555774 NOC4LQ9BVI4 516 aaKnown RBP15.06■□□□□ 0
SHMT2-222ENST00000555774 L1RE1Q9UN81 338 aa15.06■□□□□ 0
SHMT2-222ENST00000555774 TECP42680 631 aa15.06■□□□□ 0
SHMT2-222ENST00000555774 MIIPQ5JXC2 388 aa15.06■□□□□ 0
SHMT2-222ENST00000555774 CENPPQ6IPU0 288 aa15.06■□□□□ 0
SHMT2-222ENST00000555774 AMIGO3Q86WK7 504 aa15.06■□□□□ 0
SHMT2-222ENST00000555774 PODXL2Q9NZ53 605 aa15.06■□□□□ 0
SHMT2-222ENST00000555774 CDK5RAP2Q96SN8 1893 aa15.06■□□□□ 0
SHMT2-222ENST00000555774 RASSF10A6NK89 507 aa15.05■□□□□ 0
SHMT2-222ENST00000555774 HNRNPH3P31942 346 aaKnown RBP15.05■□□□□ 0
SHMT2-222ENST00000555774 PDIA5Q14554 519 aa15.05■□□□□ 0
SHMT2-222ENST00000555774 EXOC4Q96A65 974 aa15.05■□□□□ 0
SHMT2-222ENST00000555774 RBM17Q96I25 401 aaKnown RBP15.05■□□□□ 0
SHMT2-222ENST00000555774 ACBD3Q9H3P7 528 aa15.05■□□□□ 0
SHMT2-222ENST00000555774 NHEJ1Q9H9Q4 299 aaPredicted RBP15.05■□□□□ 0
SHMT2-222ENST00000555774 SAR1BQ9Y6B6 198 aa15.05■□□□□ 0
SHMT2-222ENST00000555774 ADCY7P51828 1080 aa15.05■□□□□ -0
SHMT2-222ENST00000555774 GRB10Q13322 594 aa15.05■□□□□ -0
SHMT2-222ENST00000555774 CALCRLQ16602 461 aa15.05■□□□□ -0
SHMT2-222ENST00000555774 PRR5LQ6MZQ0 368 aa15.05■□□□□ -0
SHMT2-222ENST00000555774 GUF1Q8N442 669 aaKnown RBP15.05■□□□□ -0
SHMT2-222ENST00000555774 KIAA0895Q8NCT3 520 aa15.05■□□□□ -0
SHMT2-222ENST00000555774 PURBQ96QR8 312 aaKnown RBP15.05■□□□□ -0
SHMT2-222ENST00000555774 ABCB6Q9NP58 842 aa15.05■□□□□ -0
SHMT2-222ENST00000555774 LRWD1Q9UFC0 647 aa15.05■□□□□ -0
SHMT2-222ENST00000555774 SNHG28P0DPA3 235 aa15.04■□□□□ -0
SHMT2-222ENST00000555774 PDHBP11177 359 aa15.04■□□□□ -0
SHMT2-222ENST00000555774 VSNL1P62760 191 aa15.04■□□□□ -0
SHMT2-222ENST00000555774 LRRC63Q05C16 580 aa15.04■□□□□ -0
SHMT2-222ENST00000555774 PSMD2Q13200 908 aa15.04■□□□□ -0
SHMT2-222ENST00000555774 POTEDQ86YR6 584 aa15.04■□□□□ -0
SHMT2-222ENST00000555774 NGLY1Q96IV0 654 aa15.04■□□□□ -0
SHMT2-222ENST00000555774 CPVLQ9H3G5 476 aa15.04■□□□□ -0
SHMT2-222ENST00000555774 AGPAT5Q9NUQ2 364 aa15.04■□□□□ -0
SHMT2-222ENST00000555774 BIN2Q9UBW5 565 aaPredicted RBP15.04■□□□□ -0
SHMT2-222ENST00000555774 TRIM10Q9UDY6 481 aa15.04■□□□□ -0
SHMT2-222ENST00000555774 MYO3BQ8WXR4 1341 aa15.04■□□□□ -0
SHMT2-222ENST00000555774 TARSL2A2RTX5 802 aaKnown RBP15.04■□□□□ -0
SHMT2-222ENST00000555774 USP17L5A8MUK1 530 aa15.04■□□□□ -0
SHMT2-222ENST00000555774 BBOX1O75936 387 aa15.04■□□□□ -0
SHMT2-222ENST00000555774 RHOXF2BP0C7M4 288 aa15.04■□□□□ -0
SHMT2-222ENST00000555774 FCER1AP12319 257 aa15.04■□□□□ -0
SHMT2-222ENST00000555774 VAV2P52735 878 aa15.04■□□□□ -0
SHMT2-222ENST00000555774 ST5P78524 1137 aa15.04■□□□□ -0
SHMT2-222ENST00000555774 MFSD14BQ5SR56 506 aa15.04■□□□□ -0
SHMT2-222ENST00000555774 FNBP4Q8N3X1 1017 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms