RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 EHD2Q9NZN4 543 aa13.79□□□□□ -0.2
HDAC7-230ENST00000552960 C6orf229H3BNL8 230 aa13.78□□□□□ -0.2
HDAC7-230ENST00000552960 MTIF2P46199 727 aaKnown RBP13.78□□□□□ -0.2
HDAC7-230ENST00000552960 KIF5AQ12840 1032 aa13.78□□□□□ -0.2
HDAC7-230ENST00000552960 KCTD16Q68DU8 428 aa13.78□□□□□ -0.2
HDAC7-230ENST00000552960 LRRC10BA6NIK2 292 aa13.78□□□□□ -0.2
HDAC7-230ENST00000552960 USP17L12C9JPN9 530 aa13.78□□□□□ -0.2
HDAC7-230ENST00000552960 USP17L21D6R901 530 aa13.78□□□□□ -0.2
HDAC7-230ENST00000552960 PSMD14O00487 310 aa13.78□□□□□ -0.2
HDAC7-230ENST00000552960 RPS6KA5O75582 802 aa13.78□□□□□ -0.2
HDAC7-230ENST00000552960 PRPF6O94906 941 aaKnown RBP13.78□□□□□ -0.2
HDAC7-230ENST00000552960 BMP15O95972 392 aa13.78□□□□□ -0.2
HDAC7-230ENST00000552960 GNGT1P63211 74 aa13.78□□□□□ -0.2
HDAC7-230ENST00000552960 CT47A1Q5JQC4 288 aaPredicted RBP13.78□□□□□ -0.2
HDAC7-230ENST00000552960 WDR59Q6PJI9 974 aa13.78□□□□□ -0.2
HDAC7-230ENST00000552960 NHEJ1Q9H9Q4 299 aaPredicted RBP13.78□□□□□ -0.2
HDAC7-230ENST00000552960 H7C1D1 291 aa13.77□□□□□ -0.2
HDAC7-230ENST00000552960 ZEB2O60315 1214 aa13.77□□□□□ -0.2
HDAC7-230ENST00000552960 ATP1A2P50993 1020 aa13.77□□□□□ -0.2
HDAC7-230ENST00000552960 IL17AQ16552 155 aa13.77□□□□□ -0.2
HDAC7-230ENST00000552960 CCDC181Q5TID7 509 aa13.77□□□□□ -0.2
HDAC7-230ENST00000552960 DEFB132Q7Z7B7 95 aa13.77□□□□□ -0.2
HDAC7-230ENST00000552960 TADA2BQ86TJ2 420 aa13.77□□□□□ -0.2
HDAC7-230ENST00000552960 IRF2BP1Q8IU81 584 aa13.77□□□□□ -0.2
HDAC7-230ENST00000552960 CSGALNACT2Q8N6G5 542 aa13.77□□□□□ -0.2
HDAC7-230ENST00000552960 RMND1Q9NWS8 449 aa13.77□□□□□ -0.2
HDAC7-230ENST00000552960 LRWD1Q9UFC0 647 aa13.77□□□□□ -0.2
HDAC7-230ENST00000552960 MYH13Q9UKX3 1938 aa13.77□□□□□ -0.2
HDAC7-230ENST00000552960 PLEKP08567 350 aaPredicted RBP13.77□□□□□ -0.21
HDAC7-230ENST00000552960 ATP2C1P98194 919 aaPredicted RBP13.77□□□□□ -0.21
HDAC7-230ENST00000552960 SPA17Q15506 151 aa13.77□□□□□ -0.21
HDAC7-230ENST00000552960 PDXDC2PQ6P474 469 aa13.77□□□□□ -0.21
HDAC7-230ENST00000552960 CCNI2Q6ZMN8 369 aaPredicted RBP13.77□□□□□ -0.21
HDAC7-230ENST00000552960 TBC1D16Q8TBP0 767 aa13.77□□□□□ -0.21
HDAC7-230ENST00000552960 GPKOWQ92917 476 aaPredicted RBP eCLIP13.77□□□□□ -0.21
HDAC7-230ENST00000552960 RBM17Q96I25 401 aaKnown RBP13.77□□□□□ -0.21
HDAC7-230ENST00000552960 CCDC42Q96M95 316 aa13.77□□□□□ -0.21
HDAC7-230ENST00000552960 CAPS2Q9BXY5 557 aa13.77□□□□□ -0.21
HDAC7-230ENST00000552960 DMGDHQ9UI17 866 aaKnown RBP13.77□□□□□ -0.21
HDAC7-230ENST00000552960 ERLIN2O94905 339 aa13.77□□□□□ -0.21
HDAC7-230ENST00000552960 GNAT2P19087 354 aa13.77□□□□□ -0.21
HDAC7-230ENST00000552960 UBA7P41226 1012 aa13.77□□□□□ -0.21
HDAC7-230ENST00000552960 IRAK1P51617 712 aa13.77□□□□□ -0.21
HDAC7-230ENST00000552960 CCDC178Q5BJE1 867 aa13.77□□□□□ -0.21
HDAC7-230ENST00000552960 TYW1BQ6NUM6 668 aa13.77□□□□□ -0.21
HDAC7-230ENST00000552960 TUBGCP2Q9BSJ2 902 aa13.77□□□□□ -0.21
HDAC7-230ENST00000552960 LRRC1Q9BTT6 524 aa13.77□□□□□ -0.21
HDAC7-230ENST00000552960 KCNQ5Q9NR82 932 aa13.77□□□□□ -0.21
HDAC7-230ENST00000552960 F8W031 263 aaPredicted RBP13.76□□□□□ -0.21
HDAC7-230ENST00000552960 PSMA7O14818 248 aa13.76□□□□□ -0.21
HDAC7-230ENST00000552960 PRPF3O43395 683 aaKnown RBP13.76□□□□□ -0.21
HDAC7-230ENST00000552960 USP17L8P0C7I0 530 aa13.76□□□□□ -0.21
HDAC7-230ENST00000552960 MNAT1P51948 309 aa13.76□□□□□ -0.21
HDAC7-230ENST00000552960 DZIP1Q86YF9 867 aaKnown RBP13.76□□□□□ -0.21
HDAC7-230ENST00000552960 EFCAB13Q8IY85 973 aa13.76□□□□□ -0.21
HDAC7-230ENST00000552960 SECISBP2LQ93073 1101 aaKnown RBP13.76□□□□□ -0.21
HDAC7-230ENST00000552960 VIPAS39Q9H9C1 493 aa13.76□□□□□ -0.21
HDAC7-230ENST00000552960 MLXIPQ9HAP2 919 aa13.76□□□□□ -0.21
HDAC7-230ENST00000552960 CD209Q9NNX6 404 aa13.76□□□□□ -0.21
HDAC7-230ENST00000552960 BAZ2AQ9UIF9 1905 aaKnown RBP13.76□□□□□ -0.21
HDAC7-230ENST00000552960 SHTN1A0MZ66 631 aa13.76□□□□□ -0.21
HDAC7-230ENST00000552960 LGALS16A8MUM7 142 aa13.76□□□□□ -0.21
HDAC7-230ENST00000552960 H0YHG0 523 aa13.76□□□□□ -0.21
HDAC7-230ENST00000552960 AGPSO00116 658 aa13.76□□□□□ -0.21
HDAC7-230ENST00000552960 SEC23AQ15436 765 aa13.76□□□□□ -0.21
HDAC7-230ENST00000552960 DOK7Q18PE1 504 aa13.76□□□□□ -0.21
HDAC7-230ENST00000552960 FBXW10Q5XX13 1052 aa13.76□□□□□ -0.21
HDAC7-230ENST00000552960 SH3RF3Q8TEJ3 882 aaPredicted RBP13.76□□□□□ -0.21
HDAC7-230ENST00000552960 GGA1Q9UJY5 639 aa13.76□□□□□ -0.21
HDAC7-230ENST00000552960 FAM169AQ9Y6X4 670 aa13.76□□□□□ -0.21
HDAC7-230ENST00000552960 CHRNA5P30532 468 aa13.75□□□□□ -0.21
HDAC7-230ENST00000552960 RNASE9P60153 205 aaKnown RBP13.75□□□□□ -0.21
HDAC7-230ENST00000552960 SRBD1Q8N5C6 995 aaKnown RBP13.75□□□□□ -0.21
HDAC7-230ENST00000552960 MSL3Q8N5Y2 521 aaKnown RBP13.75□□□□□ -0.21
HDAC7-230ENST00000552960 EHBP1Q8NDI1 1231 aa13.75□□□□□ -0.21
HDAC7-230ENST00000552960 FAM107BQ9H098 131 aa13.75□□□□□ -0.21
HDAC7-230ENST00000552960 SRGNP10124 158 aa13.75□□□□□ -0.21
HDAC7-230ENST00000552960 FECHP22830 423 aa13.75□□□□□ -0.21
HDAC7-230ENST00000552960 AARSP49588 968 aaKnown RBP eCLIP13.75□□□□□ -0.211e-5■■□□□ 14
HDAC7-230ENST00000552960 ZNF622Q969S3 477 aaKnown RBP eCLIP13.75□□□□□ -0.21
HDAC7-230ENST00000552960 NOC4LQ9BVI4 516 aaKnown RBP13.75□□□□□ -0.21
HDAC7-230ENST00000552960 DCP1AQ9NPI6 582 aaPredicted RBP13.75□□□□□ -0.21
HDAC7-230ENST00000552960 FAM207AQ9NSI2 230 aaPredicted RBP13.75□□□□□ -0.21
HDAC7-230ENST00000552960 CAPN11Q9UMQ6 739 aa13.75□□□□□ -0.21
HDAC7-230ENST00000552960 LEMD3Q9Y2U8 911 aa13.75□□□□□ -0.21
HDAC7-230ENST00000552960 A0A087WUV0 522 aaPredicted RBP13.75□□□□□ -0.21
HDAC7-230ENST00000552960 MOCS3O95396 460 aa13.75□□□□□ -0.21
HDAC7-230ENST00000552960 ATP2B2Q01814 1243 aa13.75□□□□□ -0.21
HDAC7-230ENST00000552960 PAPD7Q5XG87 772 aaKnown RBP13.75□□□□□ -0.21
HDAC7-230ENST00000552960 NFRKBQ6P4R8 1299 aa13.75□□□□□ -0.21
HDAC7-230ENST00000552960 C2CD5Q86YS7 1000 aa13.75□□□□□ -0.21
HDAC7-230ENST00000552960 SH2D3CQ8N5H7 860 aa13.75□□□□□ -0.21
HDAC7-230ENST00000552960 HPS3Q969F9 1004 aa13.75□□□□□ -0.21
HDAC7-230ENST00000552960 DYNLL2Q96FJ2 89 aa13.75□□□□□ -0.21
HDAC7-230ENST00000552960 EXOC1Q9NV70 894 aa13.75□□□□□ -0.21
HDAC7-230ENST00000552960 MYH10P35580 1976 aa13.74□□□□□ -0.21
HDAC7-230ENST00000552960 PPEF1O14829 653 aaPredicted RBP13.74□□□□□ -0.21
HDAC7-230ENST00000552960 NCK2O43639 380 aa13.74□□□□□ -0.21
HDAC7-230ENST00000552960 AKR1B10O60218 316 aa13.74□□□□□ -0.21
HDAC7-230ENST00000552960 PDCLQ13371 301 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms