RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 CDK7P50613 346 aa11.39□□□□□ -0.59
GCN1-208ENST00000551549 EPHB4P54760 987 aa11.39□□□□□ -0.59
GCN1-208ENST00000551549 RPS6P62753 249 aaKnown RBP11.39□□□□□ -0.59
GCN1-208ENST00000551549 CDC37Q16543 378 aaPredicted RBP11.39□□□□□ -0.59
GCN1-208ENST00000551549 FSCN1Q16658 493 aaKnown RBP11.39□□□□□ -0.59
GCN1-208ENST00000551549 IFIT1BQ5T764 474 aaKnown RBP11.39□□□□□ -0.59
GCN1-208ENST00000551549 CXCL17Q6UXB2 119 aa11.39□□□□□ -0.59
GCN1-208ENST00000551549 KIAA1211Q6ZU35 1233 aa11.39□□□□□ -0.59
GCN1-208ENST00000551549 UBAC1Q9BSL1 405 aa11.39□□□□□ -0.59
GCN1-208ENST00000551549 VAT1LQ9HCJ6 419 aa11.39□□□□□ -0.59
GCN1-208ENST00000551549 ADD3Q9UEY8 706 aaKnown RBP11.39□□□□□ -0.59
GCN1-208ENST00000551549 CHD9Q3L8U1 2897 aa11.38□□□□□ -0.59
GCN1-208ENST00000551549 RAD50Q92878 1312 aa11.38□□□□□ -0.59
GCN1-208ENST00000551549 A0A0U1RQG5 324 aaPredicted RBP11.38□□□□□ -0.59
GCN1-208ENST00000551549 ARVCFO00192 962 aa11.38□□□□□ -0.59
GCN1-208ENST00000551549 CYP21A2P08686 494 aa11.38□□□□□ -0.59
GCN1-208ENST00000551549 PARP1P09874 1014 aaKnown RBP11.38□□□□□ -0.59
GCN1-208ENST00000551549 RAG1P15918 1043 aa11.38□□□□□ -0.59
GCN1-208ENST00000551549 SEC23AQ15436 765 aa11.38□□□□□ -0.59
GCN1-208ENST00000551549 QRICH1Q2TAL8 776 aa11.38□□□□□ -0.59
GCN1-208ENST00000551549 ASPRV1Q53RT3 343 aa11.38□□□□□ -0.59
GCN1-208ENST00000551549 STAG2Q8N3U4 1231 aa11.38□□□□□ -0.59
GCN1-208ENST00000551549 RUFY2Q8WXA3 655 aa11.38□□□□□ -0.59
GCN1-208ENST00000551549 TBC1D5Q92609 795 aa11.38□□□□□ -0.59
GCN1-208ENST00000551549 WDR11Q9BZH6 1224 aa11.38□□□□□ -0.59
GCN1-208ENST00000551549 JMJD4Q9H9V9 463 aa11.38□□□□□ -0.59
GCN1-208ENST00000551549 TBX21Q9UL17 535 aa11.38□□□□□ -0.59
GCN1-208ENST00000551549 PNMA2Q9UL42 364 aa11.38□□□□□ -0.59
GCN1-208ENST00000551549 GRIN2DO15399 1336 aa11.37□□□□□ -0.59
GCN1-208ENST00000551549 CUL9Q8IWT3 2517 aa11.37□□□□□ -0.59
GCN1-208ENST00000551549 RBM47A0AV96 593 aaKnown RBP11.37□□□□□ -0.59
GCN1-208ENST00000551549 SGSM2O43147 1006 aa11.37□□□□□ -0.59
GCN1-208ENST00000551549 TIMP1P01033 207 aa11.37□□□□□ -0.59
GCN1-208ENST00000551549 EDNRBP24530 442 aa11.37□□□□□ -0.59
GCN1-208ENST00000551549 PSMC6P62333 389 aa11.37□□□□□ -0.59
GCN1-208ENST00000551549 PDE4DQ08499 809 aa11.37□□□□□ -0.59
GCN1-208ENST00000551549 RGS22Q8NE09 1264 aa11.37□□□□□ -0.59
GCN1-208ENST00000551549 SENP2Q9HC62 589 aa11.37□□□□□ -0.59
GCN1-208ENST00000551549 MTMR10Q9NXD2 777 aa11.37□□□□□ -0.59
GCN1-208ENST00000551549 Q9Y3F1 56 aa11.37□□□□□ -0.59
GCN1-208ENST00000551549 U3KPZ7 1027 aaPredicted RBP11.37□□□□□ -0.59
GCN1-208ENST00000551549 ABCB11O95342 1321 aa11.36□□□□□ -0.59
GCN1-208ENST00000551549 CHD7Q9P2D1 2997 aa11.36□□□□□ -0.59
GCN1-208ENST00000551549 LOC102724159A0A0B4J2E5 919 aa11.36□□□□□ -0.59
GCN1-208ENST00000551549 E7EWF7 191 aa11.36□□□□□ -0.59
GCN1-208ENST00000551549 DHX16O60231 1041 aaKnown RBP11.36□□□□□ -0.59
GCN1-208ENST00000551549 ZEB2O60315 1214 aa11.36□□□□□ -0.59
GCN1-208ENST00000551549 FPGSQ05932 587 aa11.36□□□□□ -0.59
GCN1-208ENST00000551549 TRDNQ13061 729 aa11.36□□□□□ -0.59
GCN1-208ENST00000551549 PWP2Q15269 919 aaKnown RBP11.36□□□□□ -0.59
GCN1-208ENST00000551549 DUSP28Q4G0W2 176 aa11.36□□□□□ -0.59
GCN1-208ENST00000551549 STOX1Q6ZVD7 989 aa11.36□□□□□ -0.59
GCN1-208ENST00000551549 CHST3Q7LGC8 479 aa11.36□□□□□ -0.59
GCN1-208ENST00000551549 SKAP1Q86WV1 359 aa11.36□□□□□ -0.59
GCN1-208ENST00000551549 FBXO11Q86XK2 927 aa11.36□□□□□ -0.59
GCN1-208ENST00000551549 FAM126BQ8IXS8 530 aa11.36□□□□□ -0.59
GCN1-208ENST00000551549 SLC43A3Q8NBI5 491 aa11.36□□□□□ -0.59
GCN1-208ENST00000551549 DNERQ8NFT8 737 aa11.36□□□□□ -0.59
GCN1-208ENST00000551549 SYTL5Q8TDW5 730 aaPredicted RBP11.36□□□□□ -0.59
GCN1-208ENST00000551549 COL20A1Q9P218 1284 aa11.36□□□□□ -0.59
GCN1-208ENST00000551549 MAD2L2Q9UI95 211 aa11.36□□□□□ -0.59
GCN1-208ENST00000551549 LTBP2Q14767 1821 aa11.36□□□□□ -0.59
GCN1-208ENST00000551549 LAMA4Q16363 1823 aa11.36□□□□□ -0.59
GCN1-208ENST00000551549 MROH7Q68CQ1 1323 aa11.35□□□□□ -0.59
GCN1-208ENST00000551549 LCTP09848 1927 aa11.35□□□□□ -0.59
GCN1-208ENST00000551549 PALM3A6NDB9 673 aaPredicted RBP11.35□□□□□ -0.59
GCN1-208ENST00000551549 KLRF2D3W0D1 207 aa11.35□□□□□ -0.59
GCN1-208ENST00000551549 IFIT3O14879 490 aaKnown RBP11.35□□□□□ -0.59
GCN1-208ENST00000551549 CABYRO75952 493 aa11.35□□□□□ -0.59
GCN1-208ENST00000551549 CD4P01730 458 aa11.35□□□□□ -0.59
GCN1-208ENST00000551549 ITGA7Q13683 1181 aa11.35□□□□□ -0.59
GCN1-208ENST00000551549 SLC35G1Q2M3R5 365 aa11.35□□□□□ -0.59
GCN1-208ENST00000551549 OR6J1Q8NGC5 347 aa11.35□□□□□ -0.59
GCN1-208ENST00000551549 COPS5Q92905 334 aa11.35□□□□□ -0.59
GCN1-208ENST00000551549 MAP4K1Q92918 833 aa11.35□□□□□ -0.59
GCN1-208ENST00000551549 FAM161BQ96MY7 647 aa11.35□□□□□ -0.59
GCN1-208ENST00000551549 TAAR1Q96RJ0 339 aa11.35□□□□□ -0.59
GCN1-208ENST00000551549 TRPV6Q9H1D0 765 aa11.35□□□□□ -0.59
GCN1-208ENST00000551549 TLR3O15455 904 aaKnown RBP11.34□□□□□ -0.59
GCN1-208ENST00000551549 PPP1R11O60927 126 aaPredicted RBP11.34□□□□□ -0.59
GCN1-208ENST00000551549 ARIH2O95376 493 aa11.34□□□□□ -0.59
GCN1-208ENST00000551549 MYL3P08590 195 aa11.34□□□□□ -0.59
GCN1-208ENST00000551549 CYP2C18P33260 490 aa11.34□□□□□ -0.59
GCN1-208ENST00000551549 FAM109BQ6ICB4 259 aaPredicted RBP11.34□□□□□ -0.59
GCN1-208ENST00000551549 MFSD5Q6N075 450 aa11.34□□□□□ -0.59
GCN1-208ENST00000551549 C16orf59Q7L2K0 433 aa11.34□□□□□ -0.59
GCN1-208ENST00000551549 RALYLQ86SE5 291 aaKnown RBP11.34□□□□□ -0.59
GCN1-208ENST00000551549 MCF2L2Q86YR7 1114 aa11.34□□□□□ -0.59
GCN1-208ENST00000551549 SCFD2Q8WU76 684 aa11.34□□□□□ -0.59
GCN1-208ENST00000551549 MTMR8Q96EF0 704 aa11.34□□□□□ -0.59
GCN1-208ENST00000551549 RNPC3Q96LT9 517 aaKnown RBP11.34□□□□□ -0.59
GCN1-208ENST00000551549 GUCD1Q96NT3 240 aa11.34□□□□□ -0.59
GCN1-208ENST00000551549 MPHOSPH6Q99547 160 aaKnown RBP11.34□□□□□ -0.59
GCN1-208ENST00000551549 PPP1R12CQ9BZL4 782 aa11.34□□□□□ -0.59
GCN1-208ENST00000551549 MRPL11Q9Y3B7 192 aaKnown RBP11.34□□□□□ -0.59
GCN1-208ENST00000551549 RBM8AQ9Y5S9 174 aaKnown RBP11.34□□□□□ -0.59
GCN1-208ENST00000551549 LRRC37A2A6NM11 1700 aa11.33□□□□□ -0.6
GCN1-208ENST00000551549 OPLAHO14841 1288 aa11.33□□□□□ -0.6
GCN1-208ENST00000551549 B4GALT4O60513 344 aa11.33□□□□□ -0.6
GCN1-208ENST00000551549 ACRP10323 421 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms