RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 ASPAP45381 313 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 CRKLP46109 303 aaKnown RBP3.23□□□□□ -1.89
CPSF6-207ENST00000551516 AMPHP49418 695 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 RGS19P49795 217 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 YARSP54577 528 aaKnown RBP3.23□□□□□ -1.89
CPSF6-207ENST00000551516 EIF5P55010 431 aaKnown RBP3.23□□□□□ -1.89
CPSF6-207ENST00000551516 CHMP4BP1P59074 171 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 TMF1P82094 1093 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 TTLL4Q14679 1199 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 NFIXQ14938 502 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 DDR2Q16832 855 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 ARSHQ5FYA8 562 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 LCE2CQ5TA81 110 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 ZBTB37Q5TC79 503 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 CDCP2Q5VXM1 449 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 ANKRD34AQ69YU3 496 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 OVOS1Q6IE37 1185 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 ZNF746Q6NUN9 644 aaPredicted RBP3.23□□□□□ -1.89
CPSF6-207ENST00000551516 RUFY4Q6ZNE9 571 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 KIAA1211Q6ZU35 1233 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.23□□□□□ -1.89
CPSF6-207ENST00000551516 TTC6Q86TZ1 520 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 SLC51AQ86UW1 340 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 MCATQ8IVS2 390 aaKnown RBP3.23□□□□□ -1.89
CPSF6-207ENST00000551516 PHACTR4Q8IZ21 702 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 CELF2-AS1Q8N7Q2 184 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 ACSF2Q96CM8 615 aaPredicted RBP3.23□□□□□ -1.89
CPSF6-207ENST00000551516 ATG4CQ96DT6 458 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 TMEM87BQ96K49 555 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 DEPDC7Q96QD5 511 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 NACC1Q96RE7 527 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 CNNM2Q9H8M5 875 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 LGR6Q9HBX8 967 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 DISC1Q9NRI5 854 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 SNTG2Q9NY99 539 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 NRXN2Q9P2S2 1712 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 TJP2Q9UDY2 1190 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 PCOLCE2Q9UKZ9 415 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 PPP1R9AQ9ULJ8 1098 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 LTN1O94822 1766 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 LTBP3Q9NS15 1303 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 UPK3BL1B0FP48 263 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 C9orf172C9J069 976 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 UPK3BL2E5RIL1 263 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 F8W735 103 aaPredicted RBP3.22□□□□□ -1.89
CPSF6-207ENST00000551516 TNFRSF10CO14798 259 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 HMGB1P09429 215 aaKnown RBP3.22□□□□□ -1.89
CPSF6-207ENST00000551516 SPATA31C1P0DKV0 1188 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 HCLS1P14317 486 aaPredicted RBP3.22□□□□□ -1.89
CPSF6-207ENST00000551516 DRD2P14416 443 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 CCNFP41002 786 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 USP11P51784 963 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 NRG1Q02297 640 aaPredicted RBP3.22□□□□□ -1.89
CPSF6-207ENST00000551516 RASGRF1Q13972 1273 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 RASA3Q14644 834 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 GRIK4Q16099 956 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 BBS9Q3SYG4 887 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 SDE2Q6IQ49 451 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 VHLLQ6RSH7 139 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 UNC5AQ6ZN44 842 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 MRPL41Q8IXM3 137 aaKnown RBP3.22□□□□□ -1.89
CPSF6-207ENST00000551516 FAM178BQ8IXR5 827 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 IFNL2Q8IZJ0 200 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 AGGF1Q8N302 714 aaeCLIP3.22□□□□□ -1.893e-8■□□□□ 9.1
CPSF6-207ENST00000551516 ZNF526Q8TF50 670 aaPredicted RBP3.22□□□□□ -1.89
CPSF6-207ENST00000551516 RAPGEF4Q8WZA2 1011 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 SYTL4Q96C24 671 aaPredicted RBP3.22□□□□□ -1.89
CPSF6-207ENST00000551516 SCARF2Q96GP6 870 aaPredicted RBP3.22□□□□□ -1.89
CPSF6-207ENST00000551516 DHRS1Q96LJ7 313 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 CCDC74BQ96LY2 380 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 YIPF2Q9BWQ6 316 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 CEP41Q9BYV8 373 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 TNKS2Q9H2K2 1166 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 PHAXQ9H814 394 aaKnown RBP3.22□□□□□ -1.89
CPSF6-207ENST00000551516 AKTIPQ9H8T0 292 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 MAPK8IP1Q9UQF2 711 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 MSRB2Q9Y3D2 182 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 RANBP2P49792 3224 aaKnown RBP3.22□□□□□ -1.89
CPSF6-207ENST00000551516 CEMIPQ8WUJ3 1361 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 HEG1Q9ULI3 1381 aa3.22□□□□□ -1.89
CPSF6-207ENST00000551516 CNTNAP5Q8WYK1 1306 aa3.21□□□□□ -1.89
CPSF6-207ENST00000551516 COL4A5P29400 1685 aa3.21□□□□□ -1.9
CPSF6-207ENST00000551516 ADAMTSL1Q8N6G6 1762 aa3.21□□□□□ -1.9
CPSF6-207ENST00000551516 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.21□□□□□ -1.9
CPSF6-207ENST00000551516 FAM221BA6H8Z2 402 aa3.21□□□□□ -1.9
CPSF6-207ENST00000551516 WIPF1O43516 503 aa3.21□□□□□ -1.9
CPSF6-207ENST00000551516 GAS2O43903 313 aaKnown RBP3.21□□□□□ -1.9
CPSF6-207ENST00000551516 DNAJA2O60884 412 aa3.21□□□□□ -1.9
CPSF6-207ENST00000551516 LRIG2O94898 1065 aa3.21□□□□□ -1.9
CPSF6-207ENST00000551516 GJB6O95452 261 aa3.21□□□□□ -1.9
CPSF6-207ENST00000551516 NCLP19338 710 aaKnown RBP3.21□□□□□ -1.9
CPSF6-207ENST00000551516 RASSF7Q02833 373 aa3.21□□□□□ -1.9
CPSF6-207ENST00000551516 NCAPHQ15003 741 aa3.21□□□□□ -1.9
CPSF6-207ENST00000551516 SHISA2Q6UWI4 295 aa3.21□□□□□ -1.9
CPSF6-207ENST00000551516 C6orf15Q6UXA7 325 aaPredicted RBP3.21□□□□□ -1.9
CPSF6-207ENST00000551516 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.21□□□□□ -1.9
CPSF6-207ENST00000551516 DNAJC10Q8IXB1 793 aa3.21□□□□□ -1.9
CPSF6-207ENST00000551516 SLFN12Q8IYM2 578 aa3.21□□□□□ -1.9
CPSF6-207ENST00000551516 SMYD4Q8IYR2 804 aaPredicted RBP3.21□□□□□ -1.9
CPSF6-207ENST00000551516 MFSD2AQ8NA29 543 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms