RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 PPP4R3AQ6IN85 833 aa22.28■■□□□ 1.16
SSH1-209ENST00000551165 HAS1Q92839 578 aa22.28■■□□□ 1.16
SSH1-209ENST00000551165 MMTAG2Q9BU76 263 aaKnown RBP22.28■■□□□ 1.16
SSH1-209ENST00000551165 NAT10Q9H0A0 1025 aaKnown RBP22.28■■□□□ 1.16
SSH1-209ENST00000551165 KIAA1683Q9H0B3 1180 aa22.28■■□□□ 1.16
SSH1-209ENST00000551165 DISC1Q9NRI5 854 aa22.28■■□□□ 1.16
SSH1-209ENST00000551165 EMILIN3Q9NT22 766 aa22.28■■□□□ 1.16
SSH1-209ENST00000551165 DDX25Q9UHL0 483 aaKnown RBP22.28■■□□□ 1.16
SSH1-209ENST00000551165 FEM1BQ9UK73 627 aa22.28■■□□□ 1.16
SSH1-209ENST00000551165 UBA7P41226 1012 aa22.27■■□□□ 1.16
SSH1-209ENST00000551165 DPYDQ12882 1025 aa22.27■■□□□ 1.16
SSH1-209ENST00000551165 NCAPHQ15003 741 aa22.27■■□□□ 1.16
SSH1-209ENST00000551165 MORC3Q14149 939 aa22.27■■□□□ 1.16
SSH1-209ENST00000551165 SCYL3Q8IZE3 742 aa22.27■■□□□ 1.16
SSH1-209ENST00000551165 PLA2G6O60733 806 aa22.26■■□□□ 1.15
SSH1-209ENST00000551165 CUL4BQ13620 913 aa22.26■■□□□ 1.15
SSH1-209ENST00000551165 FAM160B2Q86V87 743 aa22.26■■□□□ 1.15
SSH1-209ENST00000551165 IGSF22Q8N9C0 903 aa22.26■■□□□ 1.15
SSH1-209ENST00000551165 CRYGNQ8WXF5 182 aa22.26■■□□□ 1.15
SSH1-209ENST00000551165 AGBL1Q96MI9 1066 aa22.26■■□□□ 1.15
SSH1-209ENST00000551165 CCSER1Q9C0I3 900 aa22.26■■□□□ 1.15
SSH1-209ENST00000551165 GLT8D2Q9H1C3 349 aa22.26■■□□□ 1.15
SSH1-209ENST00000551165 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.26■■□□□ 1.15
SSH1-209ENST00000551165 PTPRAP18433 802 aa22.26■■□□□ 1.15
SSH1-209ENST00000551165 TXLNAP40222 546 aa22.26■■□□□ 1.15
SSH1-209ENST00000551165 STAT6P42226 847 aa22.26■■□□□ 1.15
SSH1-209ENST00000551165 CABP7Q86V35 215 aa22.26■■□□□ 1.15
SSH1-209ENST00000551165 BPIFA3Q9BQP9 254 aa22.26■■□□□ 1.15
SSH1-209ENST00000551165 DOCK1Q14185 1865 aa22.26■■□□□ 1.15
SSH1-209ENST00000551165 POTEMA6NI47 508 aa22.25■■□□□ 1.15
SSH1-209ENST00000551165 ORC2Q13416 577 aaPredicted RBP22.25■■□□□ 1.15
SSH1-209ENST00000551165 RRAGBQ5VZM2 374 aa22.25■■□□□ 1.15
SSH1-209ENST00000551165 FCHSD1Q86WN1 690 aa22.25■■□□□ 1.15
SSH1-209ENST00000551165 RASSF8Q8NHQ8 419 aa22.25■■□□□ 1.15
SSH1-209ENST00000551165 KLRG1Q96E93 195 aa22.25■■□□□ 1.15
SSH1-209ENST00000551165 ZNF536O15090 1300 aa22.25■■□□□ 1.15
SSH1-209ENST00000551165 ADM5C9JUS6 153 aa22.25■■□□□ 1.15
SSH1-209ENST00000551165 CFBP00751 764 aa22.25■■□□□ 1.15
SSH1-209ENST00000551165 VCAM1P19320 739 aa22.25■■□□□ 1.15
SSH1-209ENST00000551165 ARHGAP4P98171 946 aa22.25■■□□□ 1.15
SSH1-209ENST00000551165 LDHDQ86WU2 507 aa22.25■■□□□ 1.15
SSH1-209ENST00000551165 NUDT12Q9BQG2 462 aa22.25■■□□□ 1.15
SSH1-209ENST00000551165 TRIM5Q9C035 493 aa22.25■■□□□ 1.15
SSH1-209ENST00000551165 HSD3B7Q9H2F3 369 aa22.25■■□□□ 1.15
SSH1-209ENST00000551165 ADARB2Q9NS39 739 aaKnown RBP22.25■■□□□ 1.15
SSH1-209ENST00000551165 WDR46O15213 610 aaKnown RBP22.24■■□□□ 1.15
SSH1-209ENST00000551165 PLCG1P19174 1290 aa22.24■■□□□ 1.15
SSH1-209ENST00000551165 AP3B2Q13367 1082 aa22.24■■□□□ 1.15
SSH1-209ENST00000551165 SPC24Q8NBT2 197 aa22.24■■□□□ 1.15
SSH1-209ENST00000551165 TANGO6Q9C0B7 1094 aa22.24■■□□□ 1.15
SSH1-209ENST00000551165 TTC12Q9H892 705 aaPredicted RBP22.24■■□□□ 1.15
SSH1-209ENST00000551165 ZHX2Q9Y6X8 837 aa22.24■■□□□ 1.15
SSH1-209ENST00000551165 LMOD1P29536 600 aaPredicted RBP22.24■■□□□ 1.15
SSH1-209ENST00000551165 ZNF75DP51815 510 aa22.24■■□□□ 1.15
SSH1-209ENST00000551165 PLA2G4DQ86XP0 818 aa22.24■■□□□ 1.15
SSH1-209ENST00000551165 SMYD4Q8IYR2 804 aaPredicted RBP22.24■■□□□ 1.15
SSH1-209ENST00000551165 AK8Q96MA6 479 aa22.24■■□□□ 1.15
SSH1-209ENST00000551165 FXR2P51116 673 aaKnown RBP eCLIP22.23■■□□□ 1.15
SSH1-209ENST00000551165 LPAR1Q92633 364 aa22.23■■□□□ 1.15
SSH1-209ENST00000551165 MED15Q96RN5 788 aa22.23■■□□□ 1.15
SSH1-209ENST00000551165 GINM1Q9NU53 330 aa22.23■■□□□ 1.15
SSH1-209ENST00000551165 SPDYE3A6NKU9 549 aa22.23■■□□□ 1.15
SSH1-209ENST00000551165 USP11P51784 963 aa22.23■■□□□ 1.15
SSH1-209ENST00000551165 FMR1Q06787 632 aaKnown RBP eCLIP22.23■■□□□ 1.15
SSH1-209ENST00000551165 CYP2W1Q8TAV3 490 aa22.23■■□□□ 1.15
SSH1-209ENST00000551165 WNK4Q96J92 1243 aa22.23■■□□□ 1.15
SSH1-209ENST00000551165 SLF1Q9BQI6 1058 aa22.23■■□□□ 1.15
SSH1-209ENST00000551165 RPAP3Q9H6T3 665 aaPredicted RBP22.23■■□□□ 1.15
SSH1-209ENST00000551165 RRAGDQ9NQL2 400 aaPredicted RBP22.23■■□□□ 1.15
SSH1-209ENST00000551165 PICK1Q9NRD5 415 aa22.23■■□□□ 1.15
SSH1-209ENST00000551165 LRWD1Q9UFC0 647 aa22.23■■□□□ 1.15
SSH1-209ENST00000551165 FAM86B1E9PN63 330 aa22.22■■□□□ 1.15
SSH1-209ENST00000551165 SMC2O95347 1197 aa22.22■■□□□ 1.15
SSH1-209ENST00000551165 FAM86B2P0C5J1 330 aa22.22■■□□□ 1.15
SSH1-209ENST00000551165 BACE1P56817 501 aa22.22■■□□□ 1.15
SSH1-209ENST00000551165 PRPF38AQ8NAV1 312 aaKnown RBP22.22■■□□□ 1.15
SSH1-209ENST00000551165 RTN4Q9NQC3 1192 aaKnown RBP22.22■■□□□ 1.15
SSH1-209ENST00000551165 PIK3CDO00329 1044 aa22.21■■□□□ 1.15
SSH1-209ENST00000551165 USP2O75604 605 aaPredicted RBP22.21■■□□□ 1.15
SSH1-209ENST00000551165 PTMAP06454 111 aaKnown RBP22.21■■□□□ 1.15
SSH1-209ENST00000551165 CD44P16070 742 aaKnown RBP22.21■■□□□ 1.15
SSH1-209ENST00000551165 SREBF1P36956 1147 aa22.21■■□□□ 1.15
SSH1-209ENST00000551165 CPXCR1Q8N123 301 aa22.21■■□□□ 1.15
SSH1-209ENST00000551165 ZNF280CQ8ND82 737 aa22.21■■□□□ 1.15
SSH1-209ENST00000551165 ZNF830Q96NB3 372 aaPredicted RBP22.21■■□□□ 1.15
SSH1-209ENST00000551165 WDR18Q9BV38 432 aa22.21■■□□□ 1.15
SSH1-209ENST00000551165 CYP3A7-CYP3A51PA0A087WV96 503 aa22.21■■□□□ 1.15
SSH1-209ENST00000551165 FLOT1O75955 427 aa22.21■■□□□ 1.15
SSH1-209ENST00000551165 CYP3A7P24462 503 aa22.21■■□□□ 1.15
SSH1-209ENST00000551165 UBXN2AP68543 259 aa22.21■■□□□ 1.15
SSH1-209ENST00000551165 TRMT44Q8IYL2 757 aaKnown RBP22.21■■□□□ 1.15
SSH1-209ENST00000551165 ZFP91Q96JP5 570 aaPredicted RBP22.21■■□□□ 1.15
SSH1-209ENST00000551165 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.21■■□□□ 1.15
SSH1-209ENST00000551165 PPP2R3BQ9Y5P8 575 aa22.21■■□□□ 1.15
SSH1-209ENST00000551165 GCFC2P16383 781 aaKnown RBP22.2■■□□□ 1.15
SSH1-209ENST00000551165 HMGCS2P54868 508 aa22.2■■□□□ 1.15
SSH1-209ENST00000551165 GRB10Q13322 594 aa22.2■■□□□ 1.15
SSH1-209ENST00000551165 PRR16Q569H4 304 aa22.2■■□□□ 1.15
SSH1-209ENST00000551165 LENG9Q96B70 501 aa22.2■■□□□ 1.15
SSH1-209ENST00000551165 HOOK2Q96ED9 719 aa22.2■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms