RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 NUCB1Q02818 461 aa14.01□□□□□ -0.17
GABPB1-206ENST00000543881 FSCN1Q16658 493 aaKnown RBP14.01□□□□□ -0.17
GABPB1-206ENST00000543881 AAK1Q2M2I8 961 aa14.01□□□□□ -0.17
GABPB1-206ENST00000543881 RCSD1Q6JBY9 416 aa14.01□□□□□ -0.17
GABPB1-206ENST00000543881 TLK2Q86UE8 772 aa14.01□□□□□ -0.17
GABPB1-206ENST00000543881 FAM160B2Q86V87 743 aa14.01□□□□□ -0.17
GABPB1-206ENST00000543881 TICAM2Q86XR7 235 aa14.01□□□□□ -0.17
GABPB1-206ENST00000543881 RPUSD2Q8IZ73 545 aaKnown RBP14.01□□□□□ -0.17
GABPB1-206ENST00000543881 CHURC1Q8WUH1 139 aa14.01□□□□□ -0.17
GABPB1-206ENST00000543881 AGBL1Q96MI9 1066 aa14.01□□□□□ -0.17
GABPB1-206ENST00000543881 TRPV6Q9H1D0 765 aa14.01□□□□□ -0.17
GABPB1-206ENST00000543881 WNT8AQ9H1J5 351 aa14.01□□□□□ -0.17
GABPB1-206ENST00000543881 ISY1Q9ULR0 285 aaKnown RBP14.01□□□□□ -0.17
GABPB1-206ENST00000543881 GNEQ9Y223 722 aaKnown RBP14.01□□□□□ -0.17
GABPB1-206ENST00000543881 CCDC171Q6TFL3 1326 aa14.01□□□□□ -0.17
GABPB1-206ENST00000543881 ZBBXA8MT70 800 aa14□□□□□ -0.17
GABPB1-206ENST00000543881 PLA2G6O60733 806 aa14□□□□□ -0.17
GABPB1-206ENST00000543881 FDX1P10109 184 aa14□□□□□ -0.17
GABPB1-206ENST00000543881 SDSP20132 328 aa14□□□□□ -0.17
GABPB1-206ENST00000543881 PTGS1P23219 599 aa14□□□□□ -0.17
GABPB1-206ENST00000543881 KCNQ1P51787 676 aa14□□□□□ -0.17
GABPB1-206ENST00000543881 HAND2P61296 217 aa14□□□□□ -0.17
GABPB1-206ENST00000543881 SKIV2LQ15477 1246 aaKnown RBP14□□□□□ -0.17
GABPB1-206ENST00000543881 FAM133AQ8N9E0 248 aa14□□□□□ -0.17
GABPB1-206ENST00000543881 SEZ6LQ9BYH1 1024 aa14□□□□□ -0.17
GABPB1-206ENST00000543881 AP5M1Q9H0R1 490 aa14□□□□□ -0.17
GABPB1-206ENST00000543881 OSBPL3Q9H4L5 887 aa14□□□□□ -0.17
GABPB1-206ENST00000543881 PRR12Q9ULL5 1215 aa14□□□□□ -0.17
GABPB1-206ENST00000543881 MTMR7Q9Y216 660 aa14□□□□□ -0.17
GABPB1-206ENST00000543881 ZMYM6O95789 1325 aa14□□□□□ -0.17
GABPB1-206ENST00000543881 XIRP2A4UGR9 3374 aa14□□□□□ -0.17
GABPB1-206ENST00000543881 SOWAHBA6NEL2 793 aa13.99□□□□□ -0.17
GABPB1-206ENST00000543881 DYNC1LI2O43237 492 aaPredicted RBP13.99□□□□□ -0.17
GABPB1-206ENST00000543881 ZEB2O60315 1214 aa13.99□□□□□ -0.17
GABPB1-206ENST00000543881 ATP2A2P16615 1042 aaKnown RBP13.99□□□□□ -0.17
GABPB1-206ENST00000543881 SMPD1P17405 629 aa13.99□□□□□ -0.17
GABPB1-206ENST00000543881 IKQ13123 557 aaPredicted RBP13.99□□□□□ -0.17
GABPB1-206ENST00000543881 RRP12Q5JTH9 1297 aaKnown RBP13.99□□□□□ -0.17
GABPB1-206ENST00000543881 PPP4R3BQ5MIZ7 849 aa13.99□□□□□ -0.17
GABPB1-206ENST00000543881 VWCEQ96DN2 955 aa13.99□□□□□ -0.17
GABPB1-206ENST00000543881 SCLYQ96I15 445 aa13.99□□□□□ -0.17
GABPB1-206ENST00000543881 ACAD9Q9H845 621 aa13.99□□□□□ -0.17
GABPB1-206ENST00000543881 A1CFQ9NQ94 594 aaKnown RBP13.99□□□□□ -0.17
GABPB1-206ENST00000543881 ASB14A6NK59 587 aa13.99□□□□□ -0.17
GABPB1-206ENST00000543881 HOXD11P31277 338 aaPredicted RBP13.99□□□□□ -0.17
GABPB1-206ENST00000543881 PSMC6P62333 389 aa13.99□□□□□ -0.17
GABPB1-206ENST00000543881 TTBK2Q6IQ55 1244 aa13.99□□□□□ -0.17
GABPB1-206ENST00000543881 TBC1D10CQ8IV04 446 aa13.99□□□□□ -0.17
GABPB1-206ENST00000543881 TMEM47Q9BQJ4 181 aa13.99□□□□□ -0.17
GABPB1-206ENST00000543881 TOMM22Q9NS69 142 aa13.99□□□□□ -0.17
GABPB1-206ENST00000543881 RNF146Q9NTX7 359 aa13.99□□□□□ -0.17
GABPB1-206ENST00000543881 PRRC2BQ5JSZ5 2229 aaKnown RBP13.98□□□□□ -0.17
GABPB1-206ENST00000543881 LRRC37A2A6NM11 1700 aa13.98□□□□□ -0.17
GABPB1-206ENST00000543881 RFXAPO00287 272 aa13.98□□□□□ -0.17
GABPB1-206ENST00000543881 CA3P07451 260 aa13.98□□□□□ -0.17
GABPB1-206ENST00000543881 ALAS1P13196 640 aa13.98□□□□□ -0.17
GABPB1-206ENST00000543881 SLC16A2P36021 539 aa13.98□□□□□ -0.17
GABPB1-206ENST00000543881 MUM1L1Q5H9M0 696 aa13.98□□□□□ -0.17
GABPB1-206ENST00000543881 TMEM67Q5HYA8 995 aa13.98□□□□□ -0.17
GABPB1-206ENST00000543881 DCAF4Q8WV16 495 aa13.98□□□□□ -0.17
GABPB1-206ENST00000543881 ALDH8A1Q9H2A2 487 aaPredicted RBP13.98□□□□□ -0.17
GABPB1-206ENST00000543881 PDGFCQ9NRA1 345 aa13.98□□□□□ -0.17
GABPB1-206ENST00000543881 TCP11L1Q9NUJ3 509 aa13.98□□□□□ -0.17
GABPB1-206ENST00000543881 MTCH2Q9Y6C9 303 aa13.98□□□□□ -0.17
GABPB1-206ENST00000543881 DDX49Q9Y6V7 483 aaKnown RBP13.98□□□□□ -0.17
GABPB1-206ENST00000543881 GTPBP6O43824 516 aaPredicted RBP13.97□□□□□ -0.17
GABPB1-206ENST00000543881 TOP1P11387 765 aaKnown RBP13.97□□□□□ -0.17
GABPB1-206ENST00000543881 POU3F3P20264 500 aaPredicted RBP13.97□□□□□ -0.17
GABPB1-206ENST00000543881 TTLL4Q14679 1199 aa13.97□□□□□ -0.17
GABPB1-206ENST00000543881 CCDC96Q2M329 555 aa13.97□□□□□ -0.17
GABPB1-206ENST00000543881 IQSEC1Q6DN90 963 aa13.97□□□□□ -0.17
GABPB1-206ENST00000543881 TAPT1Q6NXT6 567 aa13.97□□□□□ -0.17
GABPB1-206ENST00000543881 EEPD1Q7L9B9 569 aa13.97□□□□□ -0.17
GABPB1-206ENST00000543881 TRERF1Q96PN7 1200 aa13.97□□□□□ -0.17
GABPB1-206ENST00000543881 Q9Y3F1 56 aa13.97□□□□□ -0.17
GABPB1-206ENST00000543881 PFKMP08237 780 aa13.96□□□□□ -0.17
GABPB1-206ENST00000543881 CYP2C9P11712 490 aa13.96□□□□□ -0.17
GABPB1-206ENST00000543881 SCN5AQ14524 2016 aa13.96□□□□□ -0.17
GABPB1-206ENST00000543881 TKFCQ3LXA3 575 aa13.96□□□□□ -0.17
GABPB1-206ENST00000543881 TMEM63BQ5T3F8 832 aa13.96□□□□□ -0.17
GABPB1-206ENST00000543881 CWC27Q6UX04 472 aaKnown RBP13.96□□□□□ -0.17
GABPB1-206ENST00000543881 BTNL9Q6UXG8 535 aa13.96□□□□□ -0.17
GABPB1-206ENST00000543881 DEFB128Q7Z7B8 93 aa13.96□□□□□ -0.17
GABPB1-206ENST00000543881 FBXO16Q8IX29 292 aaPredicted RBP13.96□□□□□ -0.17
GABPB1-206ENST00000543881 PURBQ96QR8 312 aaKnown RBP13.96□□□□□ -0.17
GABPB1-206ENST00000543881 LRFN3Q9BTN0 628 aa13.96□□□□□ -0.17
GABPB1-206ENST00000543881 RANBP17Q9H2T7 1088 aaKnown RBP13.96□□□□□ -0.17
GABPB1-206ENST00000543881 EPHX3Q9H6B9 360 aa13.96□□□□□ -0.17
GABPB1-206ENST00000543881 CERS4Q9HA82 394 aa13.96□□□□□ -0.17
GABPB1-206ENST00000543881 GPCPD1Q9NPB8 672 aa13.96□□□□□ -0.17
GABPB1-206ENST00000543881 TRMT13Q9NUP7 481 aaKnown RBP13.96□□□□□ -0.17
GABPB1-206ENST00000543881 COG5Q9UP83 839 aa13.96□□□□□ -0.17
GABPB1-206ENST00000543881 ARIH1Q9Y4X5 557 aaPredicted RBP13.96□□□□□ -0.17
GABPB1-206ENST00000543881 SUPT16HQ9Y5B9 1047 aaKnown RBP13.96□□□□□ -0.17
GABPB1-206ENST00000543881 NEDD4P46934 1319 aa13.96□□□□□ -0.18
GABPB1-206ENST00000543881 FRMPD2Q68DX3 1309 aaPredicted RBP13.96□□□□□ -0.18
GABPB1-206ENST00000543881 TRANK1O15050 2925 aa13.95□□□□□ -0.18
GABPB1-206ENST00000543881 SUPT20HL2P0C7V6 817 aa13.95□□□□□ -0.18
GABPB1-206ENST00000543881 KRT40Q6A162 431 aa13.95□□□□□ -0.18
GABPB1-206ENST00000543881 MFSD6Q6ZSS7 791 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms