RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 A0A087X0B3 334 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 USP17L15C9J2P7 530 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 USP17L13C9JLJ4 530 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 USP17L11C9JVI0 530 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 USP17L18D6R9N7 530 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 USP17L22D6RA61 530 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 USP17L17D6RBQ6 530 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 USP17L19D6RCP7 530 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 USP17L20D6RJB6 530 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 GRIN3BO60391 1043 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 SLFN14P0C7P3 912 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 USP11P51784 963 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 BACE1P56817 501 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 NLRP12P59046 1061 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 USP17L24Q0WX57 530 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 MTMR2Q13614 643 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 POSTNQ15063 836 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 E2F4Q16254 413 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 USP17L6PQ6QN14 398 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 MOXD1Q6UVY6 613 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 POTEDQ86YR6 584 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 SULF1Q8IWU6 871 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 ZNF280CQ8ND82 737 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 CRYGNQ8WXF5 182 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 ZKSCAN4Q969J2 545 aaPredicted RBP10.56□□□□□ -0.72
GNE-206ENST00000543356 MTMR9Q96QG7 549 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 DNAJC25Q9H1X3 360 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 CBX8Q9HC52 389 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 EMILIN3Q9NT22 766 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 POLR2AP24928 1970 aaKnown RBP10.56□□□□□ -0.72
GNE-206ENST00000543356 TDP2O95551 362 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 VCAM1P19320 739 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 PNOCQ13519 176 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 ZRSR1Q15695 479 aaKnown RBP10.56□□□□□ -0.72
GNE-206ENST00000543356 CALCRLQ16602 461 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 SH3RF1Q7Z6J0 888 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 PRPF38AQ8NAV1 312 aaKnown RBP10.56□□□□□ -0.72
GNE-206ENST00000543356 ZC3H15Q8WU90 426 aaKnown RBP10.56□□□□□ -0.72
GNE-206ENST00000543356 DHX58Q96C10 678 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 MBOAT7Q96N66 472 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 BPIFA3Q9BQP9 254 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 CCSER1Q9C0I3 900 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 FBXO28Q9NVF7 368 aa10.56□□□□□ -0.72
GNE-206ENST00000543356 MRPL11Q9Y3B7 192 aaKnown RBP10.56□□□□□ -0.72
GNE-206ENST00000543356 CYP3A7-CYP3A51PA0A087WV96 503 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 SLC37A4O43826 429 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 USP2O75604 605 aaPredicted RBP10.55□□□□□ -0.72
GNE-206ENST00000543356 ICAM1P05362 532 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 CYP3A7P24462 503 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 ZNF165P49910 485 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 FXR2P51116 673 aaKnown RBP eCLIP10.55□□□□□ -0.72
GNE-206ENST00000543356 GPR162Q16538 588 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 NT5DC1Q5TFE4 455 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 CCDC174Q6PII3 467 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 C11orf57Q6ZUT1 292 aaPredicted RBP10.55□□□□□ -0.72
GNE-206ENST00000543356 CEP57L1Q8IYX8 460 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 PDILTQ8N807 584 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 IQUBQ8NA54 791 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 ERCC4Q92889 916 aaPredicted RBP10.55□□□□□ -0.72
GNE-206ENST00000543356 PDLIM2Q96JY6 352 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 NAT10Q9H0A0 1025 aaKnown RBP10.55□□□□□ -0.72
GNE-206ENST00000543356 PNMA2Q9UL42 364 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 GLTPD2A6NH11 291 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 SPDYE3A6NKU9 549 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 C19orf81C9J6K1 198 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 ADM5C9JUS6 153 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 FDX1P10109 184 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 EPHX2P34913 555 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 SREBF1P36956 1147 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 SPP2Q13103 211 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 IGSF22Q8N9C0 903 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 DDX25Q9UHL0 483 aaKnown RBP10.55□□□□□ -0.72
GNE-206ENST00000543356 PPP1R9AQ9ULJ8 1098 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 LOC285556D6RIA3 1793 aa10.55□□□□□ -0.72
GNE-206ENST00000543356 ZNF536O15090 1300 aa10.54□□□□□ -0.72
GNE-206ENST00000543356 RLFQ13129 1914 aa10.54□□□□□ -0.72
GNE-206ENST00000543356 IQCB1Q15051 598 aa10.54□□□□□ -0.72
GNE-206ENST00000543356 TMEM266Q2M3C6 531 aa10.54□□□□□ -0.72
GNE-206ENST00000543356 PDXDC2PQ6P474 469 aa10.54□□□□□ -0.72
GNE-206ENST00000543356 LDHDQ86WU2 507 aa10.54□□□□□ -0.72
GNE-206ENST00000543356 SPATA20Q8TB22 786 aa10.54□□□□□ -0.72
GNE-206ENST00000543356 P2RX7Q99572 595 aaKnown RBP10.54□□□□□ -0.72
GNE-206ENST00000543356 TANGO6Q9C0B7 1094 aa10.54□□□□□ -0.72
GNE-206ENST00000543356 RPAP3Q9H6T3 665 aaPredicted RBP10.54□□□□□ -0.72
GNE-206ENST00000543356 SLC38A10Q9HBR0 1119 aa10.54□□□□□ -0.72
GNE-206ENST00000543356 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.54□□□□□ -0.72
GNE-206ENST00000543356 ESPNB1AK53 854 aa10.54□□□□□ -0.72
GNE-206ENST00000543356 FOXN1O15353 648 aa10.54□□□□□ -0.72
GNE-206ENST00000543356 TAL1P17542 331 aaPredicted RBP10.54□□□□□ -0.72
GNE-206ENST00000543356 SARSP49591 514 aaKnown RBP10.54□□□□□ -0.72
GNE-206ENST00000543356 MAP3K9P80192 1104 aa10.54□□□□□ -0.72
GNE-206ENST00000543356 ARHGAP4P98171 946 aa10.54□□□□□ -0.72
GNE-206ENST00000543356 GHRHRQ02643 423 aa10.54□□□□□ -0.72
GNE-206ENST00000543356 TRIML1Q8N9V2 468 aa10.54□□□□□ -0.72
GNE-206ENST00000543356 PAGE5Q96GU1 130 aa10.54□□□□□ -0.72
GNE-206ENST00000543356 DISC1Q9NRI5 854 aa10.54□□□□□ -0.72
GNE-206ENST00000543356 FZD1Q9UP38 647 aa10.54□□□□□ -0.72
GNE-206ENST00000543356 PCDHA5Q9Y5H7 936 aa10.54□□□□□ -0.72
GNE-206ENST00000543356 SNCAIPQ9Y6H5 919 aa10.54□□□□□ -0.72
GNE-206ENST00000543356 ZHX2Q9Y6X8 837 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms