RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 BTBD18B2RXH4 712 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 PPP1R12AO14974 1030 aaPredicted RBP5.81□□□□□ -1.48
PROM1-220ENST00000540805 N4BP3O15049 544 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 PDE8BO95263 885 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 NEFHP12036 1026 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 TM4SF1P30408 202 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 UBA7P41226 1012 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 ZAP70P43403 619 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 AFMP43652 599 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 ARHGAP27Q6ZUM4 889 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 CYB5R4Q7L1T6 521 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 MAGEB6Q8N7X4 407 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 GIMAP7Q8NHV1 300 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 BCAS4Q8TDM0 211 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 ZBTB10Q96DT7 871 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 TMEM87BQ96K49 555 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 MMS19Q96T76 1030 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 CAPS2Q9BXY5 557 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 HAUS4Q9H6D7 363 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 DENND2AQ9ULE3 1009 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 TFR2Q9UP52 801 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 SRPRBQ9Y5M8 271 aaKnown RBP5.81□□□□□ -1.48
PROM1-220ENST00000540805 H0YIN7 160 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 PSMD14O00487 310 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 MMP1P03956 469 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 UQCRFS1P1P0C7P4 283 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 CD44P16070 742 aaKnown RBP5.8□□□□□ -1.48
PROM1-220ENST00000540805 ELF1P32519 619 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 KRT9P35527 623 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 IRAK1P51617 712 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 SPAG1Q07617 926 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 NTRK3Q16288 839 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 IQCEQ6IPM2 695 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 CPXCR1Q8N123 301 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 CAPZA3Q96KX2 299 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 PIH1D3Q9NQM4 214 aaKnown RBP5.8□□□□□ -1.48
PROM1-220ENST00000540805 CTNND2Q9UQB3 1225 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 GOLGA8KD6RF30 607 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 ENC1O14682 589 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 EIF3HO15372 352 aaKnown RBP eCLIP5.8□□□□□ -1.48
PROM1-220ENST00000540805 LDHBP07195 334 aaKnown RBP5.8□□□□□ -1.48
PROM1-220ENST00000540805 TOB1P50616 345 aaPredicted RBP5.8□□□□□ -1.48
PROM1-220ENST00000540805 GNGT1P63211 74 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 WTAPQ15007 396 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 TTF1Q15361 905 aaPredicted RBP5.8□□□□□ -1.48
PROM1-220ENST00000540805 AKNAD1Q5T1N1 836 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 PPP4R3AQ6IN85 833 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 HEATR3Q7Z4Q2 680 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 TBC1D10CQ8IV04 446 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 EHBP1Q8NDI1 1231 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 NYXQ9GZU5 481 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 CSRNP2Q9H175 543 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 HDAC6Q9UBN7 1215 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.8□□□□□ -1.48
PROM1-220ENST00000540805 EPN1Q9Y6I3 576 aaPredicted RBP5.8□□□□□ -1.48
PROM1-220ENST00000540805 ZNF804BA4D1E1 1349 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 B4E1Z4 1266 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 KIAA0754O94854 1291 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 NDUFA10O95299 355 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 FMNL1O95466 1100 aaPredicted RBP5.8□□□□□ -1.48
PROM1-220ENST00000540805 ATP1A1P05023 1023 aaKnown RBP5.8□□□□□ -1.48
PROM1-220ENST00000540805 COPB1P53618 953 aaKnown RBP5.8□□□□□ -1.48
PROM1-220ENST00000540805 KRT31Q15323 416 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 DPP8Q6V1X1 898 aaPredicted RBP5.8□□□□□ -1.48
PROM1-220ENST00000540805 ZNF804AQ7Z570 1209 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 MYL10Q9BUA6 226 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 BEGAINQ9BUH8 593 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 VPS16Q9H269 839 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 FOXP1Q9H334 677 aaPredicted RBP5.8□□□□□ -1.48
PROM1-220ENST00000540805 LRRC4BQ9NT99 713 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 LIMA1Q9UHB6 759 aaKnown RBP5.8□□□□□ -1.48
PROM1-220ENST00000540805 KCNJ14Q9UNX9 436 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 PCDHB6Q9Y5E3 794 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 FOCADQ5VW36 1801 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 H0YHG0 523 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 AGPSO00116 658 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 BACH1O14867 736 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 RGL2O15211 777 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 CDC25AP30304 524 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 PHKA1P46020 1223 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 SARNPP82979 210 aaKnown RBP5.8□□□□□ -1.48
PROM1-220ENST00000540805 SPRED3Q2MJR0 410 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 CCDC122Q5T0U0 273 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 CCNI2Q6ZMN8 369 aaPredicted RBP5.8□□□□□ -1.48
PROM1-220ENST00000540805 SMYD4Q8IYR2 804 aaPredicted RBP5.8□□□□□ -1.48
PROM1-220ENST00000540805 ZNF513Q8N8E2 541 aaPredicted RBP5.8□□□□□ -1.48
PROM1-220ENST00000540805 GSDMAQ96QA5 445 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 RUFY1Q96T51 708 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 SENP2Q9HC62 589 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 TAB2Q9NYJ8 693 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 TRIM10Q9UDY6 481 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 FAM184BQ9ULE4 1060 aa5.8□□□□□ -1.48
PROM1-220ENST00000540805 COL11A2P13942 1736 aaPredicted RBP5.79□□□□□ -1.48
PROM1-220ENST00000540805 URB1O60287 2271 aaKnown RBP5.79□□□□□ -1.48
PROM1-220ENST00000540805 UBE2Q2LH0YL09 131 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 KIF1CO43896 1103 aaKnown RBP5.79□□□□□ -1.48
PROM1-220ENST00000540805 OPA1O60313 960 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 SRGAP2O75044 1071 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 ATP2C2O75185 946 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 KIF5BP33176 963 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms