RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 RCSD1Q6JBY9 416 aa16.6■□□□□ 0.25
SMARCA4-206ENST00000538456 SEZ6LQ9BYH1 1024 aa16.6■□□□□ 0.25
SMARCA4-206ENST00000538456 CERS4Q9HA82 394 aa16.6■□□□□ 0.25
SMARCA4-206ENST00000538456 VTA1Q9NP79 307 aa16.6■□□□□ 0.25
SMARCA4-206ENST00000538456 Q9Y3F1 56 aa16.6■□□□□ 0.25
SMARCA4-206ENST00000538456 TANC1Q9C0D5 1861 aa16.59■□□□□ 0.25
SMARCA4-206ENST00000538456 RFXAPO00287 272 aa16.59■□□□□ 0.25
SMARCA4-206ENST00000538456 CA3P07451 260 aa16.59■□□□□ 0.25
SMARCA4-206ENST00000538456 MYL3P08590 195 aa16.59■□□□□ 0.25
SMARCA4-206ENST00000538456 KCNQ1P51787 676 aa16.59■□□□□ 0.25
SMARCA4-206ENST00000538456 CTDSPL2Q05D32 466 aa16.59■□□□□ 0.25
SMARCA4-206ENST00000538456 CCDC96Q2M329 555 aa16.59■□□□□ 0.25
SMARCA4-206ENST00000538456 LRRFIP1Q32MZ4 808 aaKnown RBP16.59■□□□□ 0.25
SMARCA4-206ENST00000538456 PPP1R13LQ8WUF5 828 aa16.59■□□□□ 0.25
SMARCA4-206ENST00000538456 FSD1Q9BTV5 496 aa16.59■□□□□ 0.25
SMARCA4-206ENST00000538456 INCENPQ9NQS7 918 aa16.59■□□□□ 0.25
SMARCA4-206ENST00000538456 TNKSO95271 1327 aa16.59■□□□□ 0.25
SMARCA4-206ENST00000538456 PLA2G6O60733 806 aa16.58■□□□□ 0.24
SMARCA4-206ENST00000538456 BAATQ14032 418 aaPredicted RBP16.58■□□□□ 0.24
SMARCA4-206ENST00000538456 DUSP28Q4G0W2 176 aa16.58■□□□□ 0.24
SMARCA4-206ENST00000538456 FAM47CQ5HY64 1035 aa16.58■□□□□ 0.24
SMARCA4-206ENST00000538456 TMEM67Q5HYA8 995 aa16.58■□□□□ 0.24
SMARCA4-206ENST00000538456 WDR11Q9BZH6 1224 aa16.58■□□□□ 0.24
SMARCA4-206ENST00000538456 IL17RBQ9NRM6 502 aa16.58■□□□□ 0.24
SMARCA4-206ENST00000538456 RCAN3Q9UKA8 241 aa16.58■□□□□ 0.24
SMARCA4-206ENST00000538456 SCN10AQ9Y5Y9 1956 aa16.57■□□□□ 0.24
SMARCA4-206ENST00000538456 ICAM1P05362 532 aa16.57■□□□□ 0.24
SMARCA4-206ENST00000538456 PFKMP08237 780 aa16.57■□□□□ 0.24
SMARCA4-206ENST00000538456 SUPT20HL2P0C7V6 817 aa16.57■□□□□ 0.24
SMARCA4-206ENST00000538456 BMP1P13497 986 aa16.57■□□□□ 0.24
SMARCA4-206ENST00000538456 SLC16A2P36021 539 aa16.57■□□□□ 0.24
SMARCA4-206ENST00000538456 ALDH5A1P51649 535 aaPredicted RBP16.57■□□□□ 0.24
SMARCA4-206ENST00000538456 PURAQ00577 322 aaKnown RBP16.57■□□□□ 0.24
SMARCA4-206ENST00000538456 PPP4R3BQ5MIZ7 849 aa16.57■□□□□ 0.24
SMARCA4-206ENST00000538456 OR6J1Q8NGC5 347 aa16.57■□□□□ 0.24
SMARCA4-206ENST00000538456 MORC4Q8TE76 937 aa16.57■□□□□ 0.24
SMARCA4-206ENST00000538456 POLR3EQ9NVU0 708 aa16.57■□□□□ 0.24
SMARCA4-206ENST00000538456 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.57■□□□□ 0.24
SMARCA4-206ENST00000538456 PTPDC1A2A3K4 754 aa16.56■□□□□ 0.24
SMARCA4-206ENST00000538456 EPOPA6NHQ4 379 aa16.56■□□□□ 0.24
SMARCA4-206ENST00000538456 NFIBO00712 420 aa16.56■□□□□ 0.24
SMARCA4-206ENST00000538456 GTPBP6O43824 516 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-206ENST00000538456 RANBP6O60518 1105 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-206ENST00000538456 PLA2G5P39877 138 aa16.56■□□□□ 0.24
SMARCA4-206ENST00000538456 CPT1AP50416 773 aa16.56■□□□□ 0.24
SMARCA4-206ENST00000538456 AAK1Q2M2I8 961 aa16.56■□□□□ 0.24
SMARCA4-206ENST00000538456 ZMYM1Q5SVZ6 1142 aa16.56■□□□□ 0.24
SMARCA4-206ENST00000538456 KRT40Q6A162 431 aa16.56■□□□□ 0.24
SMARCA4-206ENST00000538456 TTBK2Q6IQ55 1244 aa16.56■□□□□ 0.24
SMARCA4-206ENST00000538456 SLC30A10Q6XR72 485 aa16.56■□□□□ 0.24
SMARCA4-206ENST00000538456 DCTPP1Q9H773 170 aa16.56■□□□□ 0.24
SMARCA4-206ENST00000538456 GPHNQ9NQX3 736 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-206ENST00000538456 ADD3Q9UEY8 706 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-206ENST00000538456 TET1Q8NFU7 2136 aa16.55■□□□□ 0.24
SMARCA4-206ENST00000538456 FRMPD2Q68DX3 1309 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-206ENST00000538456 FOXP2O15409 715 aa16.55■□□□□ 0.24
SMARCA4-206ENST00000538456 ACTN1P12814 892 aa16.55■□□□□ 0.24
SMARCA4-206ENST00000538456 CALML3P27482 149 aa16.55■□□□□ 0.24
SMARCA4-206ENST00000538456 NBPF20Q3BBV1 942 aa16.55■□□□□ 0.24
SMARCA4-206ENST00000538456 PI4K2BQ8TCG2 481 aa16.55■□□□□ 0.24
SMARCA4-206ENST00000538456 OTUD7AQ8TE49 926 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-206ENST00000538456 ARNTL2Q8WYA1 636 aa16.55■□□□□ 0.24
SMARCA4-206ENST00000538456 FAM122AQ96E09 287 aa16.55■□□□□ 0.24
SMARCA4-206ENST00000538456 MTG1Q9BT17 334 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-206ENST00000538456 RANBP17Q9H2T7 1088 aaKnown RBP16.55■□□□□ 0.24
SMARCA4-206ENST00000538456 MTCH2Q9Y6C9 303 aa16.55■□□□□ 0.24
SMARCA4-206ENST00000538456 COL4A4P53420 1690 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-206ENST00000538456 TRIP12Q14669 1992 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-206ENST00000538456 TTC41PQ6P2S7 1318 aa16.54■□□□□ 0.24
SMARCA4-206ENST00000538456 ERC2O15083 957 aa16.54■□□□□ 0.24
SMARCA4-206ENST00000538456 ARHGEF15O94989 841 aa16.54■□□□□ 0.24
SMARCA4-206ENST00000538456 CHMP4BP1P59074 171 aa16.54■□□□□ 0.24
SMARCA4-206ENST00000538456 SYDE2Q5VT97 1194 aa16.54■□□□□ 0.24
SMARCA4-206ENST00000538456 DCAF4Q8WV16 495 aa16.54■□□□□ 0.24
SMARCA4-206ENST00000538456 FTOQ9C0B1 505 aaKnown RBP eCLIP16.54■□□□□ 0.24
SMARCA4-206ENST00000538456 GPCPD1Q9NPB8 672 aa16.54■□□□□ 0.24
SMARCA4-206ENST00000538456 TOMM22Q9NS69 142 aa16.54■□□□□ 0.24
SMARCA4-206ENST00000538456 PTPRSQ13332 1948 aa16.54■□□□□ 0.24
SMARCA4-206ENST00000538456 RAD50Q92878 1312 aa16.53■□□□□ 0.24
SMARCA4-206ENST00000538456 PDE4DQ08499 809 aa16.53■□□□□ 0.24
SMARCA4-206ENST00000538456 PPP2R5BQ15173 497 aa16.53■□□□□ 0.24
SMARCA4-206ENST00000538456 BRDTQ58F21 947 aaPredicted RBP16.53■□□□□ 0.24
SMARCA4-206ENST00000538456 SLC9A7Q96T83 725 aa16.53■□□□□ 0.24
SMARCA4-206ENST00000538456 C1QTNF1Q9BXJ1 281 aa16.53■□□□□ 0.24
SMARCA4-206ENST00000538456 RBM47A0AV96 593 aaKnown RBP16.52■□□□□ 0.24
SMARCA4-206ENST00000538456 IQCF3P0C7M6 154 aa16.52■□□□□ 0.24
SMARCA4-206ENST00000538456 RFC2P35250 354 aa16.52■□□□□ 0.24
SMARCA4-206ENST00000538456 TAP1Q03518 808 aa16.52■□□□□ 0.24
SMARCA4-206ENST00000538456 RRP12Q5JTH9 1297 aaKnown RBP16.52■□□□□ 0.24
SMARCA4-206ENST00000538456 VPS53Q5VIR6 699 aa16.52■□□□□ 0.24
SMARCA4-206ENST00000538456 RNF207Q6ZRF8 634 aa16.52■□□□□ 0.24
SMARCA4-206ENST00000538456 HERC6Q8IVU3 1022 aa16.52■□□□□ 0.24
SMARCA4-206ENST00000538456 RETREG2Q8NC44 543 aa16.52■□□□□ 0.24
SMARCA4-206ENST00000538456 COPS5Q92905 334 aa16.52■□□□□ 0.24
SMARCA4-206ENST00000538456 NOD1Q9Y239 953 aa16.52■□□□□ 0.24
SMARCA4-206ENST00000538456 BRWD1Q9NSI6 2320 aa16.52■□□□□ 0.23
SMARCA4-206ENST00000538456 PITPNM1O00562 1244 aa16.51■□□□□ 0.23
SMARCA4-206ENST00000538456 NFRKBQ6P4R8 1299 aa16.51■□□□□ 0.23
SMARCA4-206ENST00000538456 SPRED2Q7Z698 418 aa16.51■□□□□ 0.23
SMARCA4-206ENST00000538456 CLEC4DQ8WXI8 215 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms