RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 CDK8P49336 464 aa20.03■□□□□ 0.8
RAB40C-203ENST00000535977 AMIGO3Q86WK7 504 aa20.03■□□□□ 0.8
RAB40C-203ENST00000535977 SEPT12Q8IYM1 358 aa20.03■□□□□ 0.8
RAB40C-203ENST00000535977 CCDC47Q96A33 483 aaKnown RBP20.03■□□□□ 0.8
RAB40C-203ENST00000535977 EYA3Q99504 573 aa20.03■□□□□ 0.8
RAB40C-203ENST00000535977 hCG_1984214I3L0E3 225 aa20.03■□□□□ 0.8
RAB40C-203ENST00000535977 PPP1R2P41236 205 aa20.03■□□□□ 0.8
RAB40C-203ENST00000535977 COPB1P53618 953 aaKnown RBP20.03■□□□□ 0.8
RAB40C-203ENST00000535977 GPSM2P81274 684 aa20.03■□□□□ 0.8
RAB40C-203ENST00000535977 FAM196AQ6ZSG2 479 aa20.03■□□□□ 0.8
RAB40C-203ENST00000535977 RASGRP2Q7LDG7 609 aa20.03■□□□□ 0.8
RAB40C-203ENST00000535977 MAPKAPK5Q8IW41 473 aa20.03■□□□□ 0.8
RAB40C-203ENST00000535977 TEX11Q8IYF3 940 aa20.03■□□□□ 0.8
RAB40C-203ENST00000535977 ZNF713Q8N859 430 aaPredicted RBP20.03■□□□□ 0.8
RAB40C-203ENST00000535977 CEP112Q8N8E3 955 aa20.03■□□□□ 0.8
RAB40C-203ENST00000535977 NOC3LQ8WTT2 800 aaKnown RBP20.03■□□□□ 0.8
RAB40C-203ENST00000535977 ADGRG1Q9Y653 693 aa20.03■□□□□ 0.8
RAB40C-203ENST00000535977 PRR5LQ6MZQ0 368 aa20.02■□□□□ 0.8
RAB40C-203ENST00000535977 TYW1BQ6NUM6 668 aa20.02■□□□□ 0.8
RAB40C-203ENST00000535977 ADSSL1Q8N142 457 aa20.02■□□□□ 0.8
RAB40C-203ENST00000535977 RASSF8Q8NHQ8 419 aa20.02■□□□□ 0.8
RAB40C-203ENST00000535977 RRP36Q96EU6 259 aaKnown RBP20.02■□□□□ 0.8
RAB40C-203ENST00000535977 MRPL44Q9H9J2 332 aaKnown RBP20.02■□□□□ 0.8
RAB40C-203ENST00000535977 KCNJ18B7U540 433 aa20.02■□□□□ 0.79
RAB40C-203ENST00000535977 UFL1O94874 794 aa20.02■□□□□ 0.79
RAB40C-203ENST00000535977 TUBB4BP68371 445 aa20.02■□□□□ 0.79
RAB40C-203ENST00000535977 KCNJ12Q14500 433 aa20.02■□□□□ 0.79
RAB40C-203ENST00000535977 SLC4A8Q2Y0W8 1093 aa20.02■□□□□ 0.79
RAB40C-203ENST00000535977 KBTBD4Q9NVX7 518 aa20.02■□□□□ 0.79
RAB40C-203ENST00000535977 TTF2Q9UNY4 1162 aaKnown RBP20.02■□□□□ 0.79
RAB40C-203ENST00000535977 ADAMTS3O15072 1205 aa20.01■□□□□ 0.79
RAB40C-203ENST00000535977 NONOQ15233 471 aaKnown RBP eCLIP20.01■□□□□ 0.791e-6■■■■□ 24.9
RAB40C-203ENST00000535977 INF2Q27J81 1249 aa20.01■□□□□ 0.79
RAB40C-203ENST00000535977 SEC63Q9UGP8 760 aaKnown RBP20.01■□□□□ 0.79
RAB40C-203ENST00000535977 CDC23Q9UJX2 597 aa20.01■□□□□ 0.79
RAB40C-203ENST00000535977 RHOBTB3O94955 611 aa20.01■□□□□ 0.79
RAB40C-203ENST00000535977 CASP14P31944 242 aa20.01■□□□□ 0.79
RAB40C-203ENST00000535977 USP8P40818 1118 aa20.01■□□□□ 0.79
RAB40C-203ENST00000535977 PRCPP42785 496 aa20.01■□□□□ 0.79
RAB40C-203ENST00000535977 NOVP48745 357 aa20.01■□□□□ 0.79
RAB40C-203ENST00000535977 TMC4Q7Z404 712 aa20.01■□□□□ 0.79
RAB40C-203ENST00000535977 THAP9Q9H5L6 903 aa20.01■□□□□ 0.79
RAB40C-203ENST00000535977 BCCIPQ9P287 314 aaKnown RBP eCLIP20.01■□□□□ 0.79
RAB40C-203ENST00000535977 KIF5CO60282 957 aa20■□□□□ 0.79
RAB40C-203ENST00000535977 GYPCP04921 128 aa20■□□□□ 0.79
RAB40C-203ENST00000535977 EEF1GP26641 437 aaKnown RBP20■□□□□ 0.79
RAB40C-203ENST00000535977 NAPAP54920 295 aa20■□□□□ 0.79
RAB40C-203ENST00000535977 GRIK5Q16478 980 aa20■□□□□ 0.79
RAB40C-203ENST00000535977 SOGA3Q5TF21 947 aa20■□□□□ 0.79
RAB40C-203ENST00000535977 RASGRP4Q8TDF6 673 aa20■□□□□ 0.79
RAB40C-203ENST00000535977 ACBD3Q9H3P7 528 aa20■□□□□ 0.79
RAB40C-203ENST00000535977 SAP30BPQ9UHR5 308 aaKnown RBP20■□□□□ 0.79
RAB40C-203ENST00000535977 FAM169AQ9Y6X4 670 aa20■□□□□ 0.79
RAB40C-203ENST00000535977 ESYT2A0FGR8 921 aa20■□□□□ 0.79
RAB40C-203ENST00000535977 SOWAHDA6NJG2 315 aa20■□□□□ 0.79
RAB40C-203ENST00000535977 PSMA7O14818 248 aa20■□□□□ 0.79
RAB40C-203ENST00000535977 SYF2O95926 243 aaKnown RBP20■□□□□ 0.79
RAB40C-203ENST00000535977 TFRCP02786 760 aaKnown RBP20■□□□□ 0.79
RAB40C-203ENST00000535977 CCT5P48643 541 aa20■□□□□ 0.79
RAB40C-203ENST00000535977 SLC35G1Q2M3R5 365 aa20■□□□□ 0.79
RAB40C-203ENST00000535977 CYP26C1Q6V0L0 522 aa20■□□□□ 0.79
RAB40C-203ENST00000535977 SLC44A5Q8NCS7 719 aa20■□□□□ 0.79
RAB40C-203ENST00000535977 CPLX3Q8WVH0 158 aa20■□□□□ 0.79
RAB40C-203ENST00000535977 GAKO14976 1311 aa19.99■□□□□ 0.79
RAB40C-203ENST00000535977 NAALADL2Q58DX5 795 aa19.99■□□□□ 0.79
RAB40C-203ENST00000535977 DHTKD1Q96HY7 919 aaPredicted RBP19.99■□□□□ 0.79
RAB40C-203ENST00000535977 TMEM60Q9H2L4 133 aa19.99■□□□□ 0.79
RAB40C-203ENST00000535977 PRPF6O94906 941 aaKnown RBP19.99■□□□□ 0.79
RAB40C-203ENST00000535977 OR52Z1P0C646 297 aa19.99■□□□□ 0.79
RAB40C-203ENST00000535977 HMGB2P26583 209 aaKnown RBP19.99■□□□□ 0.79
RAB40C-203ENST00000535977 CCT6AP40227 531 aaKnown RBP19.99■□□□□ 0.79
RAB40C-203ENST00000535977 AMPD3Q01432 767 aa19.99■□□□□ 0.79
RAB40C-203ENST00000535977 RAD9BQ6WBX8 426 aa19.99■□□□□ 0.79
RAB40C-203ENST00000535977 GBP3Q9H0R5 595 aa19.99■□□□□ 0.79
RAB40C-203ENST00000535977 A0A1W2PQC6 194 aa19.98■□□□□ 0.79
RAB40C-203ENST00000535977 RPAINQ86UA6 219 aa19.98■□□□□ 0.79
RAB40C-203ENST00000535977 GIMAP8Q8ND71 665 aaPredicted RBP19.98■□□□□ 0.79
RAB40C-203ENST00000535977 LZTFL1Q9NQ48 299 aa19.98■□□□□ 0.79
RAB40C-203ENST00000535977 MYO1AQ9UBC5 1043 aa19.98■□□□□ 0.79
RAB40C-203ENST00000535977 SUGT1Q9Y2Z0 365 aa19.98■□□□□ 0.79
RAB40C-203ENST00000535977 FLT1P17948 1338 aa19.98■□□□□ 0.79
RAB40C-203ENST00000535977 SMCO2A6NFE2 343 aa19.98■□□□□ 0.79
RAB40C-203ENST00000535977 HOXA10P31260 410 aaPredicted RBP19.98■□□□□ 0.79
RAB40C-203ENST00000535977 HOXA7P31268 230 aaPredicted RBP19.98■□□□□ 0.79
RAB40C-203ENST00000535977 MTF1Q14872 753 aa19.98■□□□□ 0.79
RAB40C-203ENST00000535977 NEK8Q86SG6 692 aa19.98■□□□□ 0.79
RAB40C-203ENST00000535977 CRAMP1Q96RY5 1269 aa19.98■□□□□ 0.79
RAB40C-203ENST00000535977 VPS16Q9H269 839 aa19.98■□□□□ 0.79
RAB40C-203ENST00000535977 MAGEC2Q9UBF1 373 aaPredicted RBP19.98■□□□□ 0.79
RAB40C-203ENST00000535977 CDC25AP30304 524 aa19.97■□□□□ 0.79
RAB40C-203ENST00000535977 NUP88Q99567 741 aaPredicted RBP19.97■□□□□ 0.79
RAB40C-203ENST00000535977 ABHD10Q9NUJ1 306 aa19.97■□□□□ 0.79
RAB40C-203ENST00000535977 GDAQ9Y2T3 454 aa19.97■□□□□ 0.79
RAB40C-203ENST00000535977 SNED1Q8TER0 1413 aa19.97■□□□□ 0.79
RAB40C-203ENST00000535977 KLRC4O43908 158 aa19.97■□□□□ 0.79
RAB40C-203ENST00000535977 SERPINB2P05120 415 aa19.97■□□□□ 0.79
RAB40C-203ENST00000535977 SCP2P22307 547 aa19.97■□□□□ 0.79
RAB40C-203ENST00000535977 FXR1P51114 621 aaKnown RBP eCLIP19.97■□□□□ 0.79
RAB40C-203ENST00000535977 RHBDL3P58872 404 aa19.97■□□□□ 0.79
RAB40C-203ENST00000535977 MFSD14BQ5SR56 506 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms