RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 FAM49AQ9H0Q0 323 aaPredicted RBP17.45■□□□□ 0.38
PPFIA1-222ENST00000532504 ESPNB1AK53 854 aa17.45■□□□□ 0.38
PPFIA1-222ENST00000532504 ORC4O43929 436 aa17.45■□□□□ 0.38
PPFIA1-222ENST00000532504 LPXNO60711 386 aa17.45■□□□□ 0.38
PPFIA1-222ENST00000532504 HOXD10P28358 340 aa17.45■□□□□ 0.38
PPFIA1-222ENST00000532504 LONP1P36776 959 aaKnown RBP17.45■□□□□ 0.38
PPFIA1-222ENST00000532504 TOB2Q14106 344 aaPredicted RBP17.45■□□□□ 0.38
PPFIA1-222ENST00000532504 MTMR4Q9NYA4 1195 aa17.45■□□□□ 0.38
PPFIA1-222ENST00000532504 PRPF6O94906 941 aaKnown RBP17.45■□□□□ 0.38
PPFIA1-222ENST00000532504 MLKLQ8NB16 471 aa17.45■□□□□ 0.38
PPFIA1-222ENST00000532504 TAB2Q9NYJ8 693 aa17.45■□□□□ 0.38
PPFIA1-222ENST00000532504 TRAPPC10P48553 1259 aa17.45■□□□□ 0.38
PPFIA1-222ENST00000532504 SLC8A3P57103 927 aa17.45■□□□□ 0.38
PPFIA1-222ENST00000532504 EEF2KMTQ96G04 330 aa17.45■□□□□ 0.38
PPFIA1-222ENST00000532504 ZNF215Q9UL58 517 aaPredicted RBP17.45■□□□□ 0.38
PPFIA1-222ENST00000532504 NFE2L3Q9Y4A8 694 aa17.45■□□□□ 0.38
PPFIA1-222ENST00000532504 COL4A3BPQ9Y5P4 624 aa17.45■□□□□ 0.38
PPFIA1-222ENST00000532504 ABCB11O95342 1321 aa17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 COG2Q14746 738 aa17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 RAET1EQ8TD07 263 aa17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 FAM193BQ96PV7 902 aaPredicted RBP17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 KCNQ5Q9NR82 932 aa17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 GSTTP1A0A1W2PQM5 241 aa17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 NDUFB10O96000 172 aa17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 ANKRD13AQ8IZ07 590 aa17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 MYOCDQ8IZQ8 938 aa17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 RETREG2Q8NC44 543 aa17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 NSUN6Q8TEA1 469 aaKnown RBP17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 ACAD9Q9H845 621 aa17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 KRT9P35527 623 aa17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 AXDND1Q5T1B0 1012 aaPredicted RBP17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 RBM46Q8TBY0 533 aaKnown RBP17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 NR1I2O75469 434 aa17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 NT5C2P49902 561 aa17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 GRM4Q14833 912 aa17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 CCDC127Q96BQ5 260 aa17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 IWS1Q96ST2 819 aa17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 TMEM260Q9NX78 707 aa17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 PCDHB6Q9Y5E3 794 aa17.44■□□□□ 0.38
PPFIA1-222ENST00000532504 STX10O60499 249 aa17.43■□□□□ 0.38
PPFIA1-222ENST00000532504 GNG11P61952 73 aa17.43■□□□□ 0.38
PPFIA1-222ENST00000532504 MTMR1Q13613 665 aa17.43■□□□□ 0.38
PPFIA1-222ENST00000532504 MSANTD4Q8NCY6 345 aa17.43■□□□□ 0.38
PPFIA1-222ENST00000532504 SRRTQ9BXP5 876 aaKnown RBP17.43■□□□□ 0.38
PPFIA1-222ENST00000532504 ZNF609O15014 1411 aa17.43■□□□□ 0.38
PPFIA1-222ENST00000532504 SKILP12757 684 aa17.43■□□□□ 0.38
PPFIA1-222ENST00000532504 CDC27P30260 824 aa17.43■□□□□ 0.38
PPFIA1-222ENST00000532504 CTTNQ14247 550 aaKnown RBP17.43■□□□□ 0.38
PPFIA1-222ENST00000532504 SEPT7Q16181 437 aaKnown RBP17.43■□□□□ 0.38
PPFIA1-222ENST00000532504 ZSCAN30Q86W11 494 aa17.43■□□□□ 0.38
PPFIA1-222ENST00000532504 LDHDQ86WU2 507 aa17.43■□□□□ 0.38
PPFIA1-222ENST00000532504 DLATP10515 647 aaKnown RBP17.43■□□□□ 0.38
PPFIA1-222ENST00000532504 NLRP7Q8WX94 980 aa17.43■□□□□ 0.38
PPFIA1-222ENST00000532504 GJA10Q969M2 543 aa17.43■□□□□ 0.38
PPFIA1-222ENST00000532504 MED1Q15648 1581 aaPredicted RBP17.43■□□□□ 0.38
PPFIA1-222ENST00000532504 EPB41L4AQ9HCS5 686 aaPredicted RBP17.43■□□□□ 0.38
PPFIA1-222ENST00000532504 SPDYE2BA6NHP3 402 aa17.42■□□□□ 0.38
PPFIA1-222ENST00000532504 PSAPP07602 524 aa17.42■□□□□ 0.38
PPFIA1-222ENST00000532504 SPDYE6P0CI01 402 aa17.42■□□□□ 0.38
PPFIA1-222ENST00000532504 CMA1P23946 247 aa17.42■□□□□ 0.38
PPFIA1-222ENST00000532504 NDUFA8P51970 172 aa17.42■□□□□ 0.38
PPFIA1-222ENST00000532504 KIF18AQ8NI77 898 aa17.42■□□□□ 0.38
PPFIA1-222ENST00000532504 RFX7Q2KHR2 1363 aa17.42■□□□□ 0.38
PPFIA1-222ENST00000532504 YARSP54577 528 aaKnown RBP17.42■□□□□ 0.38
PPFIA1-222ENST00000532504 STOX1Q6ZVD7 989 aa17.42■□□□□ 0.38
PPFIA1-222ENST00000532504 ABI1Q8IZP0 508 aa17.42■□□□□ 0.38
PPFIA1-222ENST00000532504 AKT1S1Q96B36 256 aa17.42■□□□□ 0.38
PPFIA1-222ENST00000532504 TFDP1Q14186 410 aa17.42■□□□□ 0.38
PPFIA1-222ENST00000532504 PFKFB3Q16875 520 aaPredicted RBP17.42■□□□□ 0.38
PPFIA1-222ENST00000532504 FAM26FQ5R3K3 315 aa17.42■□□□□ 0.38
PPFIA1-222ENST00000532504 HNRNPDLO14979 420 aaKnown RBP17.42■□□□□ 0.38
PPFIA1-222ENST00000532504 NLRP12P59046 1061 aa17.42■□□□□ 0.38
PPFIA1-222ENST00000532504 SLC39A14Q15043 492 aa17.42■□□□□ 0.38
PPFIA1-222ENST00000532504 IFI16Q16666 785 aaKnown RBP17.42■□□□□ 0.38
PPFIA1-222ENST00000532504 LARP4BQ92615 738 aaKnown RBP17.42■□□□□ 0.38
PPFIA1-222ENST00000532504 GOLGA6L10A6NI86 522 aa17.41■□□□□ 0.38
PPFIA1-222ENST00000532504 ARMCX5Q6P1M9 558 aa17.41■□□□□ 0.38
PPFIA1-222ENST00000532504 A0A087WWV3 80 aa17.41■□□□□ 0.38
PPFIA1-222ENST00000532504 UBXN4Q92575 508 aa17.41■□□□□ 0.38
PPFIA1-222ENST00000532504 PROCA1Q8NCQ7 364 aaPredicted RBP17.41■□□□□ 0.38
PPFIA1-222ENST00000532504 BCL2L12Q9HB09 334 aa17.41■□□□□ 0.38
PPFIA1-222ENST00000532504 RASA1P20936 1047 aa17.41■□□□□ 0.38
PPFIA1-222ENST00000532504 POMGNT1Q8WZA1 660 aa17.41■□□□□ 0.38
PPFIA1-222ENST00000532504 NACC1Q96RE7 527 aa17.41■□□□□ 0.38
PPFIA1-222ENST00000532504 ZSWIM4Q9H7M6 989 aa17.41■□□□□ 0.38
PPFIA1-222ENST00000532504 WTIPA6NIX2 430 aaPredicted RBP17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 C19orf81C9J6K1 198 aa17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 LAD1O00515 517 aa17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 ACTN2P35609 894 aa17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 NBPF12Q5TAG4 269 aaPredicted RBP17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 MFSD14CQ5VZR4 134 aa17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 ZFYVE28Q9HCC9 887 aa17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 CYP2B6P20813 491 aa17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 ARHGAP44Q17R89 818 aa17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 SBK1Q52WX2 424 aa17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 PARP2Q9UGN5 583 aa17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 SRGAP2CP0DJJ0 459 aa17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 HDLBPQ00341 1268 aaKnown RBP17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 NFX1Q12986 1120 aaKnown RBP17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 KRBA2Q6ZNG9 492 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms