RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 LOC102724159A0A0B4J2E5 919 aa10.9□□□□□ -0.66
HDAC3-215ENST00000519474 A0A1W2PQ45 241 aaPredicted RBP10.9□□□□□ -0.66
HDAC3-215ENST00000519474 A0A1W2PQY0 241 aa10.9□□□□□ -0.66
HDAC3-215ENST00000519474 RBM47A0AV96 593 aaKnown RBP10.9□□□□□ -0.66
HDAC3-215ENST00000519474 TRIM43BA6NCK2 446 aa10.9□□□□□ -0.66
HDAC3-215ENST00000519474 DYNC1LI2O43237 492 aaPredicted RBP10.9□□□□□ -0.66
HDAC3-215ENST00000519474 ASGR1P07306 291 aa10.9□□□□□ -0.66
HDAC3-215ENST00000519474 C6orf222P0C671 652 aaPredicted RBP10.9□□□□□ -0.66
HDAC3-215ENST00000519474 CST5P28325 142 aaPredicted RBP10.9□□□□□ -0.66
HDAC3-215ENST00000519474 CDK7P50613 346 aa10.9□□□□□ -0.66
HDAC3-215ENST00000519474 ALDH5A1P51649 535 aaPredicted RBP10.9□□□□□ -0.66
HDAC3-215ENST00000519474 MDM2Q00987 491 aaPredicted RBP10.9□□□□□ -0.66
HDAC3-215ENST00000519474 TLE2Q04725 743 aa10.9□□□□□ -0.66
HDAC3-215ENST00000519474 PWP2Q15269 919 aaKnown RBP10.9□□□□□ -0.66
HDAC3-215ENST00000519474 TRIM60Q495X7 471 aa10.9□□□□□ -0.66
HDAC3-215ENST00000519474 GNASQ5JWF2 1037 aa10.9□□□□□ -0.66
HDAC3-215ENST00000519474 SLC30A10Q6XR72 485 aa10.9□□□□□ -0.66
HDAC3-215ENST00000519474 FBXO11Q86XK2 927 aa10.9□□□□□ -0.66
HDAC3-215ENST00000519474 TRIM43Q96BQ3 446 aaPredicted RBP10.9□□□□□ -0.66
HDAC3-215ENST00000519474 TAAR1Q96RJ0 339 aa10.9□□□□□ -0.66
HDAC3-215ENST00000519474 MAF1Q9H063 256 aa10.9□□□□□ -0.66
HDAC3-215ENST00000519474 ADD3Q9UEY8 706 aaKnown RBP10.9□□□□□ -0.66
HDAC3-215ENST00000519474 Q9Y3F1 56 aa10.9□□□□□ -0.66
HDAC3-215ENST00000519474 FRMPD3Q5JV73 1810 aa10.9□□□□□ -0.66
HDAC3-215ENST00000519474 MCM3APO60318 1980 aa10.9□□□□□ -0.66
HDAC3-215ENST00000519474 A0A1W2PPC1 479 aa10.89□□□□□ -0.67
HDAC3-215ENST00000519474 MOXD2PA6NHM9 499 aa10.89□□□□□ -0.67
HDAC3-215ENST00000519474 CYTH3O43739 400 aa10.89□□□□□ -0.67
HDAC3-215ENST00000519474 PPP1R11O60927 126 aaPredicted RBP10.89□□□□□ -0.67
HDAC3-215ENST00000519474 EDNRBP24530 442 aa10.89□□□□□ -0.67
HDAC3-215ENST00000519474 PLCB2Q00722 1185 aa10.89□□□□□ -0.67
HDAC3-215ENST00000519474 BEX3Q00994 111 aa10.89□□□□□ -0.67
HDAC3-215ENST00000519474 GRM4Q14833 912 aa10.89□□□□□ -0.67
HDAC3-215ENST00000519474 WTAPQ15007 396 aa10.89□□□□□ -0.67
HDAC3-215ENST00000519474 TMEM67Q5HYA8 995 aa10.89□□□□□ -0.67
HDAC3-215ENST00000519474 CREB3L3Q68CJ9 461 aa10.89□□□□□ -0.67
HDAC3-215ENST00000519474 NOL8Q76FK4 1167 aaKnown RBP10.89□□□□□ -0.67
HDAC3-215ENST00000519474 RALYLQ86SE5 291 aaKnown RBP10.89□□□□□ -0.67
HDAC3-215ENST00000519474 FBXO16Q8IX29 292 aaPredicted RBP10.89□□□□□ -0.67
HDAC3-215ENST00000519474 PCSK9Q8NBP7 692 aaKnown RBP10.89□□□□□ -0.67
HDAC3-215ENST00000519474 DNERQ8NFT8 737 aa10.89□□□□□ -0.67
HDAC3-215ENST00000519474 SYTL5Q8TDW5 730 aaPredicted RBP10.89□□□□□ -0.67
HDAC3-215ENST00000519474 CCDC136Q96JN2 1154 aa10.89□□□□□ -0.67
HDAC3-215ENST00000519474 MTA3Q9BTC8 594 aa10.89□□□□□ -0.67
HDAC3-215ENST00000519474 VTA1Q9NP79 307 aa10.89□□□□□ -0.67
HDAC3-215ENST00000519474 COL20A1Q9P218 1284 aa10.89□□□□□ -0.67
HDAC3-215ENST00000519474 MRPL11Q9Y3B7 192 aaKnown RBP10.89□□□□□ -0.67
HDAC3-215ENST00000519474 ELP1O95163 1332 aa10.88□□□□□ -0.67
HDAC3-215ENST00000519474 ABCB11O95342 1321 aa10.88□□□□□ -0.67
HDAC3-215ENST00000519474 ERICH2A1L162 156 aa10.88□□□□□ -0.67
HDAC3-215ENST00000519474 SOX1O00570 391 aaPredicted RBP10.88□□□□□ -0.67
HDAC3-215ENST00000519474 OPLAHO14841 1288 aa10.88□□□□□ -0.67
HDAC3-215ENST00000519474 ITGB8P26012 769 aa10.88□□□□□ -0.67
HDAC3-215ENST00000519474 FAAP100Q0VG06 881 aa10.88□□□□□ -0.67
HDAC3-215ENST00000519474 DUSP28Q4G0W2 176 aa10.88□□□□□ -0.67
HDAC3-215ENST00000519474 ANKRD33Q7Z3H0 272 aa10.88□□□□□ -0.67
HDAC3-215ENST00000519474 TMTC2Q8N394 836 aa10.88□□□□□ -0.67
HDAC3-215ENST00000519474 NUP133Q8WUM0 1156 aa10.88□□□□□ -0.67
HDAC3-215ENST00000519474 VTI1AQ96AJ9 217 aa10.88□□□□□ -0.67
HDAC3-215ENST00000519474 TOX2Q96NM4 488 aa10.88□□□□□ -0.67
HDAC3-215ENST00000519474 AMNQ9BXJ7 453 aa10.88□□□□□ -0.67
HDAC3-215ENST00000519474 WDR11Q9BZH6 1224 aa10.88□□□□□ -0.67
HDAC3-215ENST00000519474 UBE2OQ9C0C9 1292 aaKnown RBP10.88□□□□□ -0.67
HDAC3-215ENST00000519474 LY9Q9HBG7 655 aa10.88□□□□□ -0.67
HDAC3-215ENST00000519474 SPC25Q9HBM1 224 aa10.88□□□□□ -0.67
HDAC3-215ENST00000519474 LAMA4Q16363 1823 aa10.88□□□□□ -0.67
HDAC3-215ENST00000519474 ARVCFO00192 962 aa10.87□□□□□ -0.67
HDAC3-215ENST00000519474 ZBTB5O15062 677 aa10.87□□□□□ -0.67
HDAC3-215ENST00000519474 PRC1O43663 620 aa10.87□□□□□ -0.67
HDAC3-215ENST00000519474 DHX16O60231 1041 aaKnown RBP10.87□□□□□ -0.67
HDAC3-215ENST00000519474 MCM5P33992 734 aa10.87□□□□□ -0.67
HDAC3-215ENST00000519474 SART3Q15020 963 aaKnown RBP10.87□□□□□ -0.67
HDAC3-215ENST00000519474 TSGA10IPQ3SY00 556 aa10.87□□□□□ -0.67
HDAC3-215ENST00000519474 CATIPQ7Z7H3 387 aa10.87□□□□□ -0.67
HDAC3-215ENST00000519474 MCF2L2Q86YR7 1114 aa10.87□□□□□ -0.67
HDAC3-215ENST00000519474 RASEFQ8IZ41 740 aa10.87□□□□□ -0.67
HDAC3-215ENST00000519474 SLC43A3Q8NBI5 491 aa10.87□□□□□ -0.67
HDAC3-215ENST00000519474 BADQ92934 168 aa10.87□□□□□ -0.67
HDAC3-215ENST00000519474 TMEM87BQ96K49 555 aa10.87□□□□□ -0.67
HDAC3-215ENST00000519474 PIGSQ96S52 555 aa10.87□□□□□ -0.67
HDAC3-215ENST00000519474 MAP3K14Q99558 947 aa10.87□□□□□ -0.67
HDAC3-215ENST00000519474 AP5M1Q9H0R1 490 aa10.87□□□□□ -0.67
HDAC3-215ENST00000519474 ANO2Q9NQ90 1003 aa10.87□□□□□ -0.67
HDAC3-215ENST00000519474 STARD7Q9NQZ5 370 aa10.87□□□□□ -0.67
HDAC3-215ENST00000519474 PDLIM7Q9NR12 457 aa10.87□□□□□ -0.67
HDAC3-215ENST00000519474 PCDHA1Q9Y5I3 950 aa10.87□□□□□ -0.67
HDAC3-215ENST00000519474 GRIN2DO15399 1336 aa10.86□□□□□ -0.67
HDAC3-215ENST00000519474 PNMA6FA0A0J9YX94 578 aa10.86□□□□□ -0.67
HDAC3-215ENST00000519474 DCDC2CA8MYV0 355 aa10.86□□□□□ -0.67
HDAC3-215ENST00000519474 KIAA0355O15063 1070 aa10.86□□□□□ -0.67
HDAC3-215ENST00000519474 CFBP00751 764 aa10.86□□□□□ -0.67
HDAC3-215ENST00000519474 LIFRP42702 1097 aa10.86□□□□□ -0.67
HDAC3-215ENST00000519474 HSD17B4P51659 736 aa10.86□□□□□ -0.67
HDAC3-215ENST00000519474 EXOSC10Q01780 885 aaKnown RBP10.86□□□□□ -0.67
HDAC3-215ENST00000519474 GHRHRQ02643 423 aa10.86□□□□□ -0.67
HDAC3-215ENST00000519474 PDE4DQ08499 809 aa10.86□□□□□ -0.67
HDAC3-215ENST00000519474 FSCN1Q16658 493 aaKnown RBP10.86□□□□□ -0.67
HDAC3-215ENST00000519474 CCDC62Q6P9F0 684 aa10.86□□□□□ -0.67
HDAC3-215ENST00000519474 CXCL17Q6UXB2 119 aa10.86□□□□□ -0.67
HDAC3-215ENST00000519474 TLK2Q86UE8 772 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms