RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 TAPT1Q6NXT6 567 aa21.26■□□□□ 0.99
TFF3-204ENST00000518498 C22orf23Q9BZE7 217 aa21.26■□□□□ 0.99
TFF3-204ENST00000518498 PDGFCQ9NRA1 345 aa21.26■□□□□ 0.99
TFF3-204ENST00000518498 CTNNA3Q9UI47 895 aa21.26■□□□□ 0.99
TFF3-204ENST00000518498 Q9Y3F1 56 aa21.26■□□□□ 0.99
TFF3-204ENST00000518498 EEPD1Q7L9B9 569 aa21.25■□□□□ 0.99
TFF3-204ENST00000518498 HERVK_113Q902F9 699 aa21.25■□□□□ 0.99
TFF3-204ENST00000518498 GAS2L1Q99501 681 aaPredicted RBP21.25■□□□□ 0.99
TFF3-204ENST00000518498 MTIF3Q9H2K0 278 aaKnown RBP21.25■□□□□ 0.99
TFF3-204ENST00000518498 HIPK3Q9H422 1215 aa21.25■□□□□ 0.99
TFF3-204ENST00000518498 CCPG1Q9ULG6 757 aa21.25■□□□□ 0.99
TFF3-204ENST00000518498 MTMR7Q9Y216 660 aa21.25■□□□□ 0.99
TFF3-204ENST00000518498 CUL9Q8IWT3 2517 aa21.24■□□□□ 0.99
TFF3-204ENST00000518498 PTH1RQ03431 593 aa21.24■□□□□ 0.99
TFF3-204ENST00000518498 ALX1Q15699 326 aa21.24■□□□□ 0.99
TFF3-204ENST00000518498 RNF20Q5VTR2 975 aa21.24■□□□□ 0.99
TFF3-204ENST00000518498 NSMFQ6X4W1 530 aa21.24■□□□□ 0.99
TFF3-204ENST00000518498 MSRAQ9UJ68 235 aa21.24■□□□□ 0.99
TFF3-204ENST00000518498 ANAPC4Q9UJX5 808 aa21.24■□□□□ 0.99
TFF3-204ENST00000518498 DDX49Q9Y6V7 483 aaKnown RBP21.24■□□□□ 0.99
TFF3-204ENST00000518498 GRIN2DO15399 1336 aa21.24■□□□□ 0.99
TFF3-204ENST00000518498 ZMYM6O95789 1325 aa21.24■□□□□ 0.99
TFF3-204ENST00000518498 FOXP2O15409 715 aa21.23■□□□□ 0.99
TFF3-204ENST00000518498 ICAM1P05362 532 aa21.23■□□□□ 0.99
TFF3-204ENST00000518498 NOVP48745 357 aa21.23■□□□□ 0.99
TFF3-204ENST00000518498 RBM25P49756 843 aaKnown RBP21.23■□□□□ 0.99
TFF3-204ENST00000518498 RAB30Q15771 203 aa21.23■□□□□ 0.99
TFF3-204ENST00000518498 CCDC96Q2M329 555 aa21.23■□□□□ 0.99
TFF3-204ENST00000518498 FBXO16Q8IX29 292 aaPredicted RBP21.23■□□□□ 0.99
TFF3-204ENST00000518498 USP38Q8NB14 1042 aa21.23■□□□□ 0.99
TFF3-204ENST00000518498 DCAF4Q8WV16 495 aa21.23■□□□□ 0.99
TFF3-204ENST00000518498 TBC1D32Q96NH3 1257 aa21.23■□□□□ 0.99
TFF3-204ENST00000518498 VTA1Q9NP79 307 aa21.23■□□□□ 0.99
TFF3-204ENST00000518498 ADD3Q9UEY8 706 aaKnown RBP21.23■□□□□ 0.99
TFF3-204ENST00000518498 RBM8AQ9Y5S9 174 aaKnown RBP21.23■□□□□ 0.99
TFF3-204ENST00000518498 LAMA4Q16363 1823 aa21.22■□□□□ 0.99
TFF3-204ENST00000518498 PTGS1P23219 599 aa21.22■□□□□ 0.99
TFF3-204ENST00000518498 HSPA4P34932 840 aa21.22■□□□□ 0.99
TFF3-204ENST00000518498 TMEM63BQ5T3F8 832 aa21.22■□□□□ 0.99
TFF3-204ENST00000518498 MORC4Q8TE76 937 aa21.22■□□□□ 0.99
TFF3-204ENST00000518498 PPM1EQ8WY54 764 aa21.22■□□□□ 0.99
TFF3-204ENST00000518498 PURBQ96QR8 312 aaKnown RBP21.22■□□□□ 0.99
TFF3-204ENST00000518498 TRPV6Q9H1D0 765 aa21.22■□□□□ 0.99
TFF3-204ENST00000518498 PRDM12Q9H4Q4 367 aa21.22■□□□□ 0.99
TFF3-204ENST00000518498 EYSQ5T1H1 3165 aa21.21■□□□□ 0.99
TFF3-204ENST00000518498 ORC4O43929 436 aa21.21■□□□□ 0.99
TFF3-204ENST00000518498 SLC16A2P36021 539 aa21.21■□□□□ 0.99
TFF3-204ENST00000518498 CCL23P55773 120 aa21.21■□□□□ 0.99
TFF3-204ENST00000518498 ANAPC15P60006 121 aa21.21■□□□□ 0.99
TFF3-204ENST00000518498 PSMC6P62333 389 aa21.21■□□□□ 0.99
TFF3-204ENST00000518498 BAATQ14032 418 aaPredicted RBP21.21■□□□□ 0.99
TFF3-204ENST00000518498 TJAP1Q5JTD0 557 aa21.21■□□□□ 0.99
TFF3-204ENST00000518498 VPS53Q5VIR6 699 aa21.21■□□□□ 0.99
TFF3-204ENST00000518498 TTBK2Q6IQ55 1244 aa21.21■□□□□ 0.99
TFF3-204ENST00000518498 BTNL9Q6UXG8 535 aa21.21■□□□□ 0.99
TFF3-204ENST00000518498 RASGRP2Q7LDG7 609 aa21.21■□□□□ 0.99
TFF3-204ENST00000518498 OTOP2Q7RTS6 562 aa21.21■□□□□ 0.99
TFF3-204ENST00000518498 RPUSD2Q8IZ73 545 aaKnown RBP21.21■□□□□ 0.99
TFF3-204ENST00000518498 RANBP17Q9H2T7 1088 aaKnown RBP21.21■□□□□ 0.99
TFF3-204ENST00000518498 TOMM22Q9NS69 142 aa21.21■□□□□ 0.99
TFF3-204ENST00000518498 CXXC1Q9P0U4 656 aaPredicted RBP21.21■□□□□ 0.99
TFF3-204ENST00000518498 UMODL1Q5DID0 1318 aa21.21■□□□□ 0.99
TFF3-204ENST00000518498 B4GALT4O60513 344 aa21.2■□□□□ 0.98
TFF3-204ENST00000518498 FGRP09769 529 aa21.2■□□□□ 0.98
TFF3-204ENST00000518498 NECTIN1Q15223 517 aa21.2■□□□□ 0.98
TFF3-204ENST00000518498 DUSP28Q4G0W2 176 aa21.2■□□□□ 0.98
TFF3-204ENST00000518498 AKNAD1Q5T1N1 836 aa21.2■□□□□ 0.98
TFF3-204ENST00000518498 NOC4LQ9BVI4 516 aaKnown RBP21.2■□□□□ 0.98
TFF3-204ENST00000518498 SLC28A3Q9HAS3 691 aa21.2■□□□□ 0.98
TFF3-204ENST00000518498 PRDM6Q9NQX0 595 aa21.2■□□□□ 0.98
TFF3-204ENST00000518498 TOP1P11387 765 aaKnown RBP21.19■□□□□ 0.98
TFF3-204ENST00000518498 IMMTQ16891 758 aaKnown RBP21.19■□□□□ 0.98
TFF3-204ENST00000518498 RRP12Q5JTH9 1297 aaKnown RBP21.19■□□□□ 0.98
TFF3-204ENST00000518498 SYDE2Q5VT97 1194 aa21.19■□□□□ 0.98
TFF3-204ENST00000518498 TMEM47Q9BQJ4 181 aa21.19■□□□□ 0.98
TFF3-204ENST00000518498 WDR11Q9BZH6 1224 aa21.19■□□□□ 0.98
TFF3-204ENST00000518498 GPCPD1Q9NPB8 672 aa21.19■□□□□ 0.98
TFF3-204ENST00000518498 POLR3EQ9NVU0 708 aa21.19■□□□□ 0.98
TFF3-204ENST00000518498 LOC102724159A0A0B4J2E5 919 aa21.18■□□□□ 0.98
TFF3-204ENST00000518498 FGAP02671 866 aa21.18■□□□□ 0.98
TFF3-204ENST00000518498 ALDH5A1P51649 535 aaPredicted RBP21.18■□□□□ 0.98
TFF3-204ENST00000518498 PWP2Q15269 919 aaKnown RBP21.18■□□□□ 0.98
TFF3-204ENST00000518498 IL27Q8NEV9 243 aa21.18■□□□□ 0.98
TFF3-204ENST00000518498 KCNB2Q92953 911 aa21.18■□□□□ 0.98
TFF3-204ENST00000518498 NKX2-4Q9H2Z4 354 aa21.18■□□□□ 0.98
TFF3-204ENST00000518498 TCP11L1Q9NUJ3 509 aa21.18■□□□□ 0.98
TFF3-204ENST00000518498 PTPDC1A2A3K4 754 aa21.17■□□□□ 0.98
TFF3-204ENST00000518498 SUPT20HL2P0C7V6 817 aa21.17■□□□□ 0.98
TFF3-204ENST00000518498 IGFBP4P22692 258 aa21.17■□□□□ 0.98
TFF3-204ENST00000518498 KRT32Q14532 448 aa21.17■□□□□ 0.98
TFF3-204ENST00000518498 CREB3L3Q68CJ9 461 aa21.17■□□□□ 0.98
TFF3-204ENST00000518498 ATXN2LQ8WWM7 1075 aaKnown RBP21.17■□□□□ 0.98
TFF3-204ENST00000518498 WNT8AQ9H1J5 351 aa21.17■□□□□ 0.98
TFF3-204ENST00000518498 ALDH8A1Q9H2A2 487 aaPredicted RBP21.17■□□□□ 0.98
TFF3-204ENST00000518498 GPHNQ9NQX3 736 aaPredicted RBP21.17■□□□□ 0.98
TFF3-204ENST00000518498 PNMA2Q9UL42 364 aa21.17■□□□□ 0.98
TFF3-204ENST00000518498 SLC4A7Q9Y6M7 1214 aa21.17■□□□□ 0.98
TFF3-204ENST00000518498 FRMPD2Q68DX3 1309 aaPredicted RBP21.17■□□□□ 0.98
TFF3-204ENST00000518498 RBM47A0AV96 593 aaKnown RBP21.16■□□□□ 0.98
TFF3-204ENST00000518498 NFIBO00712 420 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms