RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 CDC37L1Q7L3B6 337 aa4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 CYFIP1Q7L576 1253 aa4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 GTF2IRD2Q86UP8 949 aa4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 TRIM59Q8IWR1 403 aa4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 MIER2Q8N344 545 aa4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 TMEM145Q8NBT3 493 aa4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 NGDNQ8NEJ9 315 aaKnown RBP4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 SLC35G2Q8TBE7 412 aa4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 ENOX1Q8TC92 643 aaKnown RBP4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 DIO2Q92813 273 aa4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 SLC5A5Q92911 643 aa4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 NUP88Q99567 741 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 DPH2Q9BQC3 489 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 APOL5Q9BWW9 433 aa4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 SMG9Q9H0W8 520 aaKnown RBP4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 CSRNP2Q9H175 543 aa4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 NUCKS1Q9H1E3 243 aaKnown RBP4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 CYP26B1Q9NR63 512 aa4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 RAD18Q9NS91 495 aa4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 SMC4Q9NTJ3 1288 aa4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 TRMT13Q9NUP7 481 aaKnown RBP4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 POLG2Q9UHN1 485 aa4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 COQ6Q9Y2Z9 468 aa4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 EMC9Q9Y3B6 208 aa4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 NOC2LQ9Y3T9 749 aaKnown RBP4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 PCDHGB3Q9Y5G1 929 aa4.39□□□□□ -1.71
HMGB1P22-201ENST00000505315 PRSS47A8MTI9 375 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 TPP1O14773 563 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 CBFA2T2O43439 604 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 ECEL1O95672 775 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 SLFN14P0C7P3 912 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 CD247P20963 164 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 USP14P54578 494 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 DSG1Q02413 1049 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 MAP4K2Q12851 820 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 TBX2Q13207 712 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 SCARF1Q14162 830 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 MYBPC2Q14324 1141 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 NTRK3Q16288 839 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 DPY19L1Q2PZI1 675 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 INAVAQ3KP66 663 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 CCDC93Q567U6 631 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 PPM1JQ5JR12 505 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 PPP4R3AQ6IN85 833 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 TXNDC11Q6PKC3 985 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 KCNT2Q6UVM3 1135 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 MYCT1Q8N699 235 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 ZBTB34Q8NCN2 500 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 CLRN3Q8NCR9 226 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 FAM156AQ8NDB6 213 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 CXorf38Q8TB03 319 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 DCAF4Q8WV16 495 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 ERP27Q96DN0 273 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 OTUD5Q96G74 571 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 ABHD17AQ96GS6 310 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 TMEM87BQ96K49 555 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 MRGPRX3Q96LB0 322 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 CCDC140Q96MF4 163 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 MAP3K14Q99558 947 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 USP26Q9BXU7 913 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 WNT10AQ9GZT5 417 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 VPS11Q9H270 941 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 NOL6Q9H6R4 1146 aaKnown RBP4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 RRN3Q9NYV6 651 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 RTEL1Q9NZ71 1219 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 FNIP2Q9P278 1114 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 TJP2Q9UDY2 1190 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 NOL7Q9UMY1 257 aaKnown RBP4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 ASXL2Q76L83 1435 aa4.38□□□□□ -1.71
HMGB1P22-201ENST00000505315 PTPDC1A2A3K4 754 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 hCG_1984214I3L0E3 225 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 FZD9O00144 591 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 EIF4EBP3O60516 100 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 SNX2O60749 519 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 H2AFYO75367 372 aaKnown RBP4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 UBOX5O94941 541 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 RHOBTB3O94955 611 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 CPP00450 1065 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 ATP2A2P16615 1042 aaKnown RBP4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 EPHA1P21709 976 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 GRK2P25098 689 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 HOXC12P31275 282 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 ECE1P42892 770 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 ALDH5A1P51649 535 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 GFRA1P56159 465 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 ST5P78524 1137 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 NUCB1Q02818 461 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 BTKQ06187 659 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 LBRQ14739 615 aaKnown RBP4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 KRT72Q14CN4 511 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 NBPF12Q5TAG4 269 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 BROXQ5VW32 411 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 SPRYD7Q5W111 196 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 SLC6A19Q695T7 634 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 MZT2AQ6P582 158 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 ABHD17CQ6PCB6 329 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 DARS2Q6PI48 645 aaKnown RBP4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 LVRNQ6Q4G3 990 aa4.37□□□□□ -1.71
HMGB1P22-201ENST00000505315 LDHAL6AQ6ZMR3 332 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms