RNA–Protein interactions for RNA: ENST00000502367.1

NFKB1-203, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-203ENST00000502367 TRMT2AQ8IZ69 625 aaKnown RBP7.88□□□□□ -1.15
NFKB1-203ENST00000502367 REXO1Q8N1G1 1221 aaKnown RBP7.88□□□□□ -1.15
NFKB1-203ENST00000502367 ASIC4Q96FT7 647 aa7.88□□□□□ -1.15
NFKB1-203ENST00000502367 COX4I2Q96KJ9 171 aa7.88□□□□□ -1.15
NFKB1-203ENST00000502367 SLC9A7Q96T83 725 aa7.88□□□□□ -1.15
NFKB1-203ENST00000502367 GPR62Q9BZJ7 368 aa7.88□□□□□ -1.15
NFKB1-203ENST00000502367 KCNK12Q9HB15 430 aa7.88□□□□□ -1.15
NFKB1-203ENST00000502367 METTL5Q9NRN9 209 aaKnown RBP7.88□□□□□ -1.15
NFKB1-203ENST00000502367 DUSP13Q9UII6 198 aa7.88□□□□□ -1.15
NFKB1-203ENST00000502367 PCDHA11Q9Y5I1 949 aa7.88□□□□□ -1.15
NFKB1-203ENST00000502367 USP54Q70EL1 1684 aa7.88□□□□□ -1.15
NFKB1-203ENST00000502367 PTCH1Q13635 1447 aa7.87□□□□□ -1.15
NFKB1-203ENST00000502367 FMN2Q9NZ56 1722 aa7.87□□□□□ -1.15
NFKB1-203ENST00000502367 SCAMP3O14828 347 aaKnown RBP7.87□□□□□ -1.15
NFKB1-203ENST00000502367 ACRP10323 421 aa7.87□□□□□ -1.15
NFKB1-203ENST00000502367 EGR3Q06889 387 aa7.87□□□□□ -1.15
NFKB1-203ENST00000502367 PAK2Q13177 524 aa7.87□□□□□ -1.15
NFKB1-203ENST00000502367 NBPF12Q5TAG4 269 aaPredicted RBP7.87□□□□□ -1.15
NFKB1-203ENST00000502367 MORC1Q86VD1 984 aa7.87□□□□□ -1.15
NFKB1-203ENST00000502367 KRTAP19-1Q8IUB9 90 aa7.87□□□□□ -1.15
NFKB1-203ENST00000502367 LIN37Q96GY3 246 aaPredicted RBP7.87□□□□□ -1.15
NFKB1-203ENST00000502367 ALPK1Q96QP1 1244 aa7.87□□□□□ -1.15
NFKB1-203ENST00000502367 GPATCH2Q9NW75 528 aa7.87□□□□□ -1.15
NFKB1-203ENST00000502367 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.87□□□□□ -1.15
NFKB1-203ENST00000502367 POGKQ9P215 609 aa7.87□□□□□ -1.15
NFKB1-203ENST00000502367 EBF1Q9UH73 591 aa7.87□□□□□ -1.15
NFKB1-203ENST00000502367 KCNH3Q9ULD8 1083 aa7.87□□□□□ -1.15
NFKB1-203ENST00000502367 PPIP5K1Q6PFW1 1433 aa7.86□□□□□ -1.15
NFKB1-203ENST00000502367 ZNF503-AS2A6NEH8 195 aa7.86□□□□□ -1.15
NFKB1-203ENST00000502367 FYB1O15117 783 aa7.86□□□□□ -1.15
NFKB1-203ENST00000502367 NT5DC4Q86YG4 428 aa7.86□□□□□ -1.15
NFKB1-203ENST00000502367 CCDC146Q8IYE0 955 aa7.86□□□□□ -1.15
NFKB1-203ENST00000502367 FLAD1Q8NFF5 587 aa7.86□□□□□ -1.15
NFKB1-203ENST00000502367 TMEM40Q8WWA1 233 aa7.86□□□□□ -1.15
NFKB1-203ENST00000502367 PEAK1Q9H792 1746 aa7.86□□□□□ -1.15
NFKB1-203ENST00000502367 EDC4Q6P2E9 1401 aaKnown RBP7.86□□□□□ -1.15
NFKB1-203ENST00000502367 PNPLA6Q8IY17 1366 aa7.85□□□□□ -1.15
NFKB1-203ENST00000502367 BIN1O00499 593 aa7.85□□□□□ -1.15
NFKB1-203ENST00000502367 VAMP1P23763 118 aa7.85□□□□□ -1.15
NFKB1-203ENST00000502367 RRP1P56182 461 aaKnown RBP7.85□□□□□ -1.15
NFKB1-203ENST00000502367 CHMP4BP1P59074 171 aa7.85□□□□□ -1.15
NFKB1-203ENST00000502367 WDR43Q15061 677 aaKnown RBP eCLIP7.85□□□□□ -1.15
NFKB1-203ENST00000502367 ZYXQ15942 572 aaKnown RBP7.85□□□□□ -1.15
NFKB1-203ENST00000502367 ZNF648Q5T619 568 aaPredicted RBP7.85□□□□□ -1.15
NFKB1-203ENST00000502367 ASPNQ9BXN1 380 aa7.85□□□□□ -1.15
NFKB1-203ENST00000502367 C19orf44Q9H6X5 657 aa7.85□□□□□ -1.15
NFKB1-203ENST00000502367 GINM1Q9NU53 330 aa7.85□□□□□ -1.15
NFKB1-203ENST00000502367 FAM86C1Q9NVL1 165 aa7.85□□□□□ -1.15
NFKB1-203ENST00000502367 SSH2Q76I76 1423 aa7.85□□□□□ -1.15
NFKB1-203ENST00000502367 LRRC7Q96NW7 1537 aa7.84□□□□□ -1.15
NFKB1-203ENST00000502367 RGPD1P0DJD0 1748 aa7.84□□□□□ -1.15
NFKB1-203ENST00000502367 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.84□□□□□ -1.15
NFKB1-203ENST00000502367 MEIS1O00470 390 aa7.84□□□□□ -1.15
NFKB1-203ENST00000502367 MTHFSP49914 203 aa7.84□□□□□ -1.15
NFKB1-203ENST00000502367 GALK1P51570 392 aa7.84□□□□□ -1.15
NFKB1-203ENST00000502367 SLFN5Q08AF3 891 aa7.84□□□□□ -1.15
NFKB1-203ENST00000502367 NBPF9Q3BBW0 867 aa7.84□□□□□ -1.15
NFKB1-203ENST00000502367 ZPBP2Q6X784 338 aa7.84□□□□□ -1.15
NFKB1-203ENST00000502367 TMPRSS7Q7RTY8 843 aa7.84□□□□□ -1.15
NFKB1-203ENST00000502367 SLC6A18Q96N87 628 aa7.84□□□□□ -1.15
NFKB1-203ENST00000502367 PRDM14Q9GZV8 571 aa7.84□□□□□ -1.15
NFKB1-203ENST00000502367 TRIT1Q9H3H1 467 aaKnown RBP7.84□□□□□ -1.15
NFKB1-203ENST00000502367 PIK3C2AO00443 1686 aa7.83□□□□□ -1.16
NFKB1-203ENST00000502367 C9IYK1 514 aa7.83□□□□□ -1.16
NFKB1-203ENST00000502367 APAF1O14727 1248 aa7.83□□□□□ -1.16
NFKB1-203ENST00000502367 GDNFP39905 211 aa7.83□□□□□ -1.16
NFKB1-203ENST00000502367 NMIQ13287 307 aaPredicted RBP7.83□□□□□ -1.16
NFKB1-203ENST00000502367 KCNMB1Q16558 191 aa7.83□□□□□ -1.16
NFKB1-203ENST00000502367 CLEC16AQ2KHT3 1053 aa7.83□□□□□ -1.16
NFKB1-203ENST00000502367 TDRD10Q5VZ19 366 aaKnown RBP7.83□□□□□ -1.16
NFKB1-203ENST00000502367 ZSWIM9Q86XI8 627 aa7.83□□□□□ -1.16
NFKB1-203ENST00000502367 ZNF654Q8IZM8 581 aa7.83□□□□□ -1.16
NFKB1-203ENST00000502367 USHBP1Q8N6Y0 703 aa7.83□□□□□ -1.16
NFKB1-203ENST00000502367 FERD3LQ96RJ6 166 aa7.83□□□□□ -1.16
NFKB1-203ENST00000502367 TERF2IPQ9NYB0 399 aa7.83□□□□□ -1.16
NFKB1-203ENST00000502367 RCAN3Q9UKA8 241 aa7.83□□□□□ -1.16
NFKB1-203ENST00000502367 ZNRF3Q9ULT6 936 aa7.83□□□□□ -1.16
NFKB1-203ENST00000502367 EFR3BQ9Y2G0 817 aa7.83□□□□□ -1.16
NFKB1-203ENST00000502367 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.83□□□□□ -1.16
NFKB1-203ENST00000502367 OVOS2A0A0J9YW53 1432 aa7.83□□□□□ -1.16
NFKB1-203ENST00000502367 OVOS2Q6IE36 1432 aa7.83□□□□□ -1.16
NFKB1-203ENST00000502367 NWD1Q149M9 1564 aa7.83□□□□□ -1.16
NFKB1-203ENST00000502367 CDK12Q9NYV4 1490 aaPredicted RBP7.82□□□□□ -1.16
NFKB1-203ENST00000502367 DLG5Q8TDM6 1919 aa7.82□□□□□ -1.16
NFKB1-203ENST00000502367 CLEC3AO75596 197 aa7.82□□□□□ -1.16
NFKB1-203ENST00000502367 TXKP42681 527 aa7.82□□□□□ -1.16
NFKB1-203ENST00000502367 TNNT2P45379 298 aaPredicted RBP7.82□□□□□ -1.16
NFKB1-203ENST00000502367 TIGD5Q53EQ6 642 aa7.82□□□□□ -1.16
NFKB1-203ENST00000502367 KIRREL1Q96J84 757 aa7.82□□□□□ -1.16
NFKB1-203ENST00000502367 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.82□□□□□ -1.16
NFKB1-203ENST00000502367 ACBD3Q9H3P7 528 aa7.82□□□□□ -1.16
NFKB1-203ENST00000502367 TMEM59LQ9UK28 342 aa7.82□□□□□ -1.16
NFKB1-203ENST00000502367 TBX22Q9Y458 520 aa7.82□□□□□ -1.16
NFKB1-203ENST00000502367 MEIS3P2A8K0S8 358 aa7.81□□□□□ -1.16
NFKB1-203ENST00000502367 TNFRSF10CO14798 259 aa7.81□□□□□ -1.16
NFKB1-203ENST00000502367 PRAMEF1O95521 474 aa7.81□□□□□ -1.16
NFKB1-203ENST00000502367 ZGLP1P0C6A0 271 aa7.81□□□□□ -1.16
NFKB1-203ENST00000502367 AFMP43652 599 aa7.81□□□□□ -1.16
NFKB1-203ENST00000502367 TEKQ02763 1124 aa7.81□□□□□ -1.16
NFKB1-203ENST00000502367 PRR23BQ6ZRT6 265 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms