RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 ELNP15502 786 aa16.36■□□□□ 0.21
RNF4-202ENST00000502316 MCM2P49736 904 aa16.36■□□□□ 0.21
RNF4-202ENST00000502316 HSD17B4P51659 736 aa16.36■□□□□ 0.21
RNF4-202ENST00000502316 RPS6P62753 249 aaKnown RBP16.36■□□□□ 0.21
RNF4-202ENST00000502316 ST3GAL1Q11201 340 aa16.36■□□□□ 0.21
RNF4-202ENST00000502316 BAATQ14032 418 aaPredicted RBP16.36■□□□□ 0.21
RNF4-202ENST00000502316 CCL14Q16627 93 aa16.36■□□□□ 0.21
RNF4-202ENST00000502316 SLC9C1Q4G0N8 1177 aa16.36■□□□□ 0.21
RNF4-202ENST00000502316 PPP1R18Q6NYC8 613 aa16.36■□□□□ 0.21
RNF4-202ENST00000502316 NECAB1Q8N987 351 aa16.36■□□□□ 0.21
RNF4-202ENST00000502316 ARMC5Q96C12 935 aa16.36■□□□□ 0.21
RNF4-202ENST00000502316 SLC26A6Q9BXS9 759 aa16.36■□□□□ 0.21
RNF4-202ENST00000502316 BARHL2Q9NY43 387 aa16.36■□□□□ 0.21
RNF4-202ENST00000502316 FLRT1Q9NZU1 646 aa16.36■□□□□ 0.21
RNF4-202ENST00000502316 PTPDC1A2A3K4 754 aa16.35■□□□□ 0.21
RNF4-202ENST00000502316 STXBP3O00186 592 aa16.35■□□□□ 0.21
RNF4-202ENST00000502316 HMGCRP04035 888 aa16.35■□□□□ 0.21
RNF4-202ENST00000502316 CNTN2Q02246 1040 aa16.35■□□□□ 0.21
RNF4-202ENST00000502316 MAMDC4Q6UXC1 1216 aa16.35■□□□□ 0.21
RNF4-202ENST00000502316 HEATR3Q7Z4Q2 680 aa16.35■□□□□ 0.21
RNF4-202ENST00000502316 TEX2Q8IWB9 1127 aa16.35■□□□□ 0.21
RNF4-202ENST00000502316 TRIM22Q8IYM9 498 aa16.35■□□□□ 0.21
RNF4-202ENST00000502316 MSL3Q8N5Y2 521 aaKnown RBP16.35■□□□□ 0.21
RNF4-202ENST00000502316 TBC1D5Q92609 795 aa16.35■□□□□ 0.21
RNF4-202ENST00000502316 GPKOWQ92917 476 aaPredicted RBP eCLIP16.35■□□□□ 0.21
RNF4-202ENST00000502316 ASTN1O14525 1302 aa16.35■□□□□ 0.21
RNF4-202ENST00000502316 STK36Q9NRP7 1315 aa16.35■□□□□ 0.21
RNF4-202ENST00000502316 LOC102724159A0A0B4J2E5 919 aa16.34■□□□□ 0.21
RNF4-202ENST00000502316 SOWAHBA6NEL2 793 aa16.34■□□□□ 0.21
RNF4-202ENST00000502316 PIK3CDO00329 1044 aa16.34■□□□□ 0.21
RNF4-202ENST00000502316 DEXIO95424 95 aa16.34■□□□□ 0.21
RNF4-202ENST00000502316 AKAP17AQ02040 695 aaKnown RBP16.34■□□□□ 0.21
RNF4-202ENST00000502316 SSRP1Q08945 709 aaKnown RBP16.34■□□□□ 0.21
RNF4-202ENST00000502316 PWP2Q15269 919 aaKnown RBP16.34■□□□□ 0.21
RNF4-202ENST00000502316 MAP3K21Q5TCX8 1036 aa16.34■□□□□ 0.21
RNF4-202ENST00000502316 TYW1BQ6NUM6 668 aa16.34■□□□□ 0.21
RNF4-202ENST00000502316 SYTL5Q8TDW5 730 aaPredicted RBP16.34■□□□□ 0.21
RNF4-202ENST00000502316 SH3TC2Q8TF17 1288 aa16.34■□□□□ 0.21
RNF4-202ENST00000502316 ZNF333Q96JL9 665 aa16.34■□□□□ 0.21
RNF4-202ENST00000502316 PPFIA3O75145 1194 aa16.33■□□□□ 0.2
RNF4-202ENST00000502316 CFBP00751 764 aa16.33■□□□□ 0.2
RNF4-202ENST00000502316 INHAP05111 366 aa16.33■□□□□ 0.2
RNF4-202ENST00000502316 CALML3P27482 149 aa16.33■□□□□ 0.2
RNF4-202ENST00000502316 NSUN7Q8NE18 718 aaKnown RBP16.33■□□□□ 0.2
RNF4-202ENST00000502316 DNERQ8NFT8 737 aa16.33■□□□□ 0.2
RNF4-202ENST00000502316 TINF2Q9BSI4 451 aa16.33■□□□□ 0.2
RNF4-202ENST00000502316 COL20A1Q9P218 1284 aa16.33■□□□□ 0.2
RNF4-202ENST00000502316 ADD3Q9UEY8 706 aaKnown RBP16.33■□□□□ 0.2
RNF4-202ENST00000502316 SYNGAP1Q96PV0 1343 aa16.33■□□□□ 0.2
RNF4-202ENST00000502316 ESYT2A0FGR8 921 aa16.32■□□□□ 0.2
RNF4-202ENST00000502316 GCOM1H8Y6P7 765 aaPredicted RBP16.32■□□□□ 0.2
RNF4-202ENST00000502316 MEIS2O14770 477 aa16.32■□□□□ 0.2
RNF4-202ENST00000502316 POLR2MP0CAP2 368 aa16.32■□□□□ 0.2
RNF4-202ENST00000502316 NAPAP54920 295 aa16.32■□□□□ 0.2
RNF4-202ENST00000502316 MFSD14CQ5VZR4 134 aa16.32■□□□□ 0.2
RNF4-202ENST00000502316 CCDC83Q8IWF9 413 aa16.32■□□□□ 0.2
RNF4-202ENST00000502316 FAM177A1Q8N128 213 aaPredicted RBP16.32■□□□□ 0.2
RNF4-202ENST00000502316 MORC4Q8TE76 937 aa16.32■□□□□ 0.2
RNF4-202ENST00000502316 CCDC12Q8WUD4 166 aaPredicted RBP16.32■□□□□ 0.2
RNF4-202ENST00000502316 TMX3Q96JJ7 454 aa16.32■□□□□ 0.2
RNF4-202ENST00000502316 PURBQ96QR8 312 aaKnown RBP16.32■□□□□ 0.2
RNF4-202ENST00000502316 LLPHQ9BRT6 129 aaKnown RBP16.32■□□□□ 0.2
RNF4-202ENST00000502316 PSTPIP2Q9H939 334 aa16.32■□□□□ 0.2
RNF4-202ENST00000502316 SH3GLB2Q9NR46 395 aa16.32■□□□□ 0.2
RNF4-202ENST00000502316 FDPSP14324 419 aaKnown RBP16.31■□□□□ 0.2
RNF4-202ENST00000502316 EDNRBP24530 442 aa16.31■□□□□ 0.2
RNF4-202ENST00000502316 CYP2C19P33261 490 aa16.31■□□□□ 0.2
RNF4-202ENST00000502316 ALDH5A1P51649 535 aaPredicted RBP16.31■□□□□ 0.2
RNF4-202ENST00000502316 UBXN2AP68543 259 aa16.31■□□□□ 0.2
RNF4-202ENST00000502316 CACNB2Q08289 660 aaPredicted RBP16.31■□□□□ 0.2
RNF4-202ENST00000502316 TRIM32Q13049 653 aa16.31■□□□□ 0.2
RNF4-202ENST00000502316 TNS4Q8IZW8 715 aa16.31■□□□□ 0.2
RNF4-202ENST00000502316 SMARCC2Q8TAQ2 1214 aa16.31■□□□□ 0.2
RNF4-202ENST00000502316 SHISA4Q96DD7 197 aa16.31■□□□□ 0.2
RNF4-202ENST00000502316 ZMYND12Q9H0C1 365 aa16.31■□□□□ 0.2
RNF4-202ENST00000502316 RIC8AQ9NPQ8 531 aa16.31■□□□□ 0.2
RNF4-202ENST00000502316 NRBP1Q9UHY1 535 aa16.31■□□□□ 0.2
RNF4-202ENST00000502316 LRRC37A2A6NM11 1700 aa16.31■□□□□ 0.2
RNF4-202ENST00000502316 FRMPD4Q14CM0 1322 aa16.3■□□□□ 0.2
RNF4-202ENST00000502316 ASB14A6NK59 587 aa16.3■□□□□ 0.2
RNF4-202ENST00000502316 CYBAP13498 195 aa16.3■□□□□ 0.2
RNF4-202ENST00000502316 PRKAR2AP13861 404 aaKnown RBP16.3■□□□□ 0.2
RNF4-202ENST00000502316 HOXA13P31271 388 aaPredicted RBP16.3■□□□□ 0.2
RNF4-202ENST00000502316 USP17L6PQ6QN14 398 aa16.3■□□□□ 0.2
RNF4-202ENST00000502316 ARMCX2Q7L311 632 aa16.3■□□□□ 0.2
RNF4-202ENST00000502316 CCDC148Q8NFR7 591 aa16.3■□□□□ 0.2
RNF4-202ENST00000502316 NSUN6Q8TEA1 469 aaKnown RBP16.3■□□□□ 0.2
RNF4-202ENST00000502316 CUL5Q93034 780 aa16.3■□□□□ 0.2
RNF4-202ENST00000502316 TAAR1Q96RJ0 339 aa16.3■□□□□ 0.2
RNF4-202ENST00000502316 GLT8D2Q9H1C3 349 aa16.3■□□□□ 0.2
RNF4-202ENST00000502316 ORC3Q9UBD5 711 aaPredicted RBP16.3■□□□□ 0.2
RNF4-202ENST00000502316 BIN2Q9UBW5 565 aaPredicted RBP16.3■□□□□ 0.2
RNF4-202ENST00000502316 RPTORQ8N122 1335 aa16.29■□□□□ 0.2
RNF4-202ENST00000502316 SMCO2A6NFE2 343 aa16.29■□□□□ 0.2
RNF4-202ENST00000502316 JAK2O60674 1132 aa16.29■□□□□ 0.2
RNF4-202ENST00000502316 SNAI1O95863 264 aaPredicted RBP16.29■□□□□ 0.2
RNF4-202ENST00000502316 ADCY7P51828 1080 aa16.29■□□□□ 0.2
RNF4-202ENST00000502316 MRPL12P52815 198 aaKnown RBP16.29■□□□□ 0.2
RNF4-202ENST00000502316 WASF1Q92558 559 aa16.29■□□□□ 0.2
RNF4-202ENST00000502316 ABHD8Q96I13 439 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms