RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 LCTP09848 1927 aa16.66■□□□□ 0.26
USP11-212ENST00000497179 DOCK3Q8IZD9 2030 aa16.65■□□□□ 0.26
USP11-212ENST00000497179 POTEB2H3BUK9 544 aa16.65■□□□□ 0.26
USP11-212ENST00000497179 JAK2O60674 1132 aa16.65■□□□□ 0.26
USP11-212ENST00000497179 HSD17B4P51659 736 aa16.65■□□□□ 0.26
USP11-212ENST00000497179 NAPAP54920 295 aa16.65■□□□□ 0.26
USP11-212ENST00000497179 RPS6P62753 249 aaKnown RBP16.65■□□□□ 0.26
USP11-212ENST00000497179 SMARCC2Q8TAQ2 1214 aa16.65■□□□□ 0.26
USP11-212ENST00000497179 NPLOC4Q8TAT6 608 aa16.65■□□□□ 0.26
USP11-212ENST00000497179 RAET1EQ8TD07 263 aa16.65■□□□□ 0.26
USP11-212ENST00000497179 FGD4Q96M96 766 aa16.65■□□□□ 0.26
USP11-212ENST00000497179 MAP3K20Q9NYL2 800 aaKnown RBP16.65■□□□□ 0.26
USP11-212ENST00000497179 ORC3Q9UBD5 711 aaPredicted RBP16.65■□□□□ 0.26
USP11-212ENST00000497179 PLXNA1Q9UIW2 1896 aa16.65■□□□□ 0.26
USP11-212ENST00000497179 CFBP00751 764 aa16.64■□□□□ 0.25
USP11-212ENST00000497179 FDPSP14324 419 aaKnown RBP16.64■□□□□ 0.25
USP11-212ENST00000497179 ZNF467Q7Z7K2 595 aaPredicted RBP16.64■□□□□ 0.25
USP11-212ENST00000497179 TEX2Q8IWB9 1127 aa16.64■□□□□ 0.25
USP11-212ENST00000497179 TRMT44Q8IYL2 757 aaKnown RBP16.64■□□□□ 0.25
USP11-212ENST00000497179 FAM177A1Q8N128 213 aaPredicted RBP16.64■□□□□ 0.25
USP11-212ENST00000497179 SLAIN1Q8ND83 568 aa16.64■□□□□ 0.25
USP11-212ENST00000497179 PXYLP1Q8TE99 480 aa16.64■□□□□ 0.25
USP11-212ENST00000497179 CCDC12Q8WUD4 166 aaPredicted RBP16.64■□□□□ 0.25
USP11-212ENST00000497179 TBC1D5Q92609 795 aa16.64■□□□□ 0.25
USP11-212ENST00000497179 MAML3Q96JK9 1138 aa16.64■□□□□ 0.25
USP11-212ENST00000497179 SH3GLB2Q9NR46 395 aa16.64■□□□□ 0.25
USP11-212ENST00000497179 ZNFX1Q9P2E3 1918 aaKnown RBP16.64■□□□□ 0.25
USP11-212ENST00000497179 ESYT2A0FGR8 921 aa16.63■□□□□ 0.25
USP11-212ENST00000497179 SOWAHBA6NEL2 793 aa16.63■□□□□ 0.25
USP11-212ENST00000497179 GCOM1H8Y6P7 765 aaPredicted RBP16.63■□□□□ 0.25
USP11-212ENST00000497179 PIK3CDO00329 1044 aa16.63■□□□□ 0.25
USP11-212ENST00000497179 ADCY3O60266 1144 aa16.63■□□□□ 0.25
USP11-212ENST00000497179 DTNBO60941 627 aa16.63■□□□□ 0.25
USP11-212ENST00000497179 IGHA2P01877 340 aa16.63■□□□□ 0.25
USP11-212ENST00000497179 POLR2MP0CAP2 368 aa16.63■□□□□ 0.25
USP11-212ENST00000497179 CALML3P27482 149 aa16.63■□□□□ 0.25
USP11-212ENST00000497179 CNTN2Q02246 1040 aa16.63■□□□□ 0.25
USP11-212ENST00000497179 OLFML2BQ68BL8 750 aa16.63■□□□□ 0.25
USP11-212ENST00000497179 CCDC148Q8NFR7 591 aa16.63■□□□□ 0.25
USP11-212ENST00000497179 SYTL5Q8TDW5 730 aaPredicted RBP16.63■□□□□ 0.25
USP11-212ENST00000497179 TRIB2Q92519 343 aa16.63■□□□□ 0.25
USP11-212ENST00000497179 WASF1Q92558 559 aa16.63■□□□□ 0.25
USP11-212ENST00000497179 SHISA4Q96DD7 197 aa16.63■□□□□ 0.25
USP11-212ENST00000497179 PSTPIP2Q9H939 334 aa16.63■□□□□ 0.25
USP11-212ENST00000497179 ASTN1O14525 1302 aa16.63■□□□□ 0.25
USP11-212ENST00000497179 K7ELQ4 463 aaPredicted RBP16.62■□□□□ 0.25
USP11-212ENST00000497179 MEIS2O14770 477 aa16.62■□□□□ 0.25
USP11-212ENST00000497179 ELNP15502 786 aa16.62■□□□□ 0.25
USP11-212ENST00000497179 ADCY7P51828 1080 aa16.62■□□□□ 0.25
USP11-212ENST00000497179 HMGN5P82970 282 aaKnown RBP16.62■□□□□ 0.25
USP11-212ENST00000497179 CUL4AQ13619 759 aa16.62■□□□□ 0.25
USP11-212ENST00000497179 CCL14Q16627 93 aa16.62■□□□□ 0.25
USP11-212ENST00000497179 MSL3Q8N5Y2 521 aaKnown RBP16.62■□□□□ 0.25
USP11-212ENST00000497179 CUL5Q93034 780 aa16.62■□□□□ 0.25
USP11-212ENST00000497179 AIFM3Q96NN9 605 aa16.62■□□□□ 0.25
USP11-212ENST00000497179 MCOLN1Q9GZU1 580 aa16.62■□□□□ 0.25
USP11-212ENST00000497179 GLT8D2Q9H1C3 349 aa16.62■□□□□ 0.25
USP11-212ENST00000497179 RIC8AQ9NPQ8 531 aa16.62■□□□□ 0.25
USP11-212ENST00000497179 FLRT1Q9NZU1 646 aa16.62■□□□□ 0.25
USP11-212ENST00000497179 VPS54Q9P1Q0 977 aa16.62■□□□□ 0.25
USP11-212ENST00000497179 COL20A1Q9P218 1284 aa16.62■□□□□ 0.25
USP11-212ENST00000497179 ADD3Q9UEY8 706 aaKnown RBP16.62■□□□□ 0.25
USP11-212ENST00000497179 LOC102724159A0A0B4J2E5 919 aa16.61■□□□□ 0.25
USP11-212ENST00000497179 SMCO2A6NFE2 343 aa16.61■□□□□ 0.25
USP11-212ENST00000497179 HMGCRP04035 888 aa16.61■□□□□ 0.25
USP11-212ENST00000497179 HOXA13P31271 388 aaPredicted RBP16.61■□□□□ 0.25
USP11-212ENST00000497179 GRK4P32298 578 aa16.61■□□□□ 0.25
USP11-212ENST00000497179 MRPL12P52815 198 aaKnown RBP16.61■□□□□ 0.25
USP11-212ENST00000497179 PWP2Q15269 919 aaKnown RBP16.61■□□□□ 0.25
USP11-212ENST00000497179 MAMDC4Q6UXC1 1216 aa16.61■□□□□ 0.25
USP11-212ENST00000497179 HSCBQ8IWL3 235 aa16.61■□□□□ 0.25
USP11-212ENST00000497179 DNERQ8NFT8 737 aa16.61■□□□□ 0.25
USP11-212ENST00000497179 PURBQ96QR8 312 aaKnown RBP16.61■□□□□ 0.25
USP11-212ENST00000497179 ALG1Q9BT22 464 aa16.61■□□□□ 0.25
USP11-212ENST00000497179 ZMYND12Q9H0C1 365 aa16.61■□□□□ 0.25
USP11-212ENST00000497179 LRRC37A2A6NM11 1700 aa16.61■□□□□ 0.25
USP11-212ENST00000497179 ALDH5A1P51649 535 aaPredicted RBP16.6■□□□□ 0.25
USP11-212ENST00000497179 UBE2SQ16763 222 aa16.6■□□□□ 0.25
USP11-212ENST00000497179 SLC9C1Q4G0N8 1177 aa16.6■□□□□ 0.25
USP11-212ENST00000497179 USP17L6PQ6QN14 398 aa16.6■□□□□ 0.25
USP11-212ENST00000497179 MORC4Q8TE76 937 aa16.6■□□□□ 0.25
USP11-212ENST00000497179 TAAR1Q96RJ0 339 aa16.6■□□□□ 0.25
USP11-212ENST00000497179 TINF2Q9BSI4 451 aa16.6■□□□□ 0.25
USP11-212ENST00000497179 C6orf50Q9HD87 102 aa16.6■□□□□ 0.25
USP11-212ENST00000497179 FRMPD4Q14CM0 1322 aa16.6■□□□□ 0.25
USP11-212ENST00000497179 SYNGAP1Q96PV0 1343 aa16.6■□□□□ 0.25
USP11-212ENST00000497179 ASB14A6NK59 587 aa16.59■□□□□ 0.25
USP11-212ENST00000497179 XBP1P17861 261 aa16.59■□□□□ 0.25
USP11-212ENST00000497179 EDNRBP24530 442 aa16.59■□□□□ 0.25
USP11-212ENST00000497179 GNA11P29992 359 aa16.59■□□□□ 0.25
USP11-212ENST00000497179 COL13A1Q5TAT6 717 aaPredicted RBP16.59■□□□□ 0.25
USP11-212ENST00000497179 MFSD14CQ5VZR4 134 aa16.59■□□□□ 0.25
USP11-212ENST00000497179 NSUN6Q8TEA1 469 aaKnown RBP16.59■□□□□ 0.25
USP11-212ENST00000497179 SH3TC2Q8TF17 1288 aa16.59■□□□□ 0.25
USP11-212ENST00000497179 ARMC5Q96C12 935 aa16.59■□□□□ 0.25
USP11-212ENST00000497179 RMDN3Q96TC7 470 aa16.59■□□□□ 0.25
USP11-212ENST00000497179 INHAP05111 366 aa16.58■□□□□ 0.24
USP11-212ENST00000497179 CYP2C19P33261 490 aa16.58■□□□□ 0.24
USP11-212ENST00000497179 CLK2P49760 499 aaKnown RBP16.58■□□□□ 0.24
USP11-212ENST00000497179 MAP3K21Q5TCX8 1036 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms