RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 CRIP3Q6Q6R5 217 aa5.49□□□□□ -1.53
PHC3-216ENST00000497171 SPRED1Q7Z699 444 aa5.49□□□□□ -1.53
PHC3-216ENST00000497171 TMEM192Q8IY95 271 aa5.49□□□□□ -1.53
PHC3-216ENST00000497171 CCDC144CPQ8IYA2 1237 aa5.49□□□□□ -1.53
PHC3-216ENST00000497171 MRS2Q9HD23 443 aa5.49□□□□□ -1.53
PHC3-216ENST00000497171 ST6GALNAC2Q9UJ37 374 aa5.49□□□□□ -1.53
PHC3-216ENST00000497171 PLA2G2DQ9UNK4 145 aa5.49□□□□□ -1.53
PHC3-216ENST00000497171 CYP2C8P10632 490 aa5.48□□□□□ -1.53
PHC3-216ENST00000497171 ACVRL1P37023 503 aa5.48□□□□□ -1.53
PHC3-216ENST00000497171 TMC4Q7Z404 712 aa5.48□□□□□ -1.53
PHC3-216ENST00000497171 C7orf61Q8IZ16 206 aa5.48□□□□□ -1.53
PHC3-216ENST00000497171 NETO2Q8NC67 525 aa5.48□□□□□ -1.53
PHC3-216ENST00000497171 NLGN2Q8NFZ4 835 aa5.48□□□□□ -1.53
PHC3-216ENST00000497171 GIPC2Q8TF65 315 aa5.48□□□□□ -1.53
PHC3-216ENST00000497171 SRRTQ9BXP5 876 aaKnown RBP5.48□□□□□ -1.53
PHC3-216ENST00000497171 VPS11Q9H270 941 aa5.48□□□□□ -1.53
PHC3-216ENST00000497171 EHMT1Q9H9B1 1298 aa5.48□□□□□ -1.53
PHC3-216ENST00000497171 INVSQ9Y283 1065 aa5.48□□□□□ -1.53
PHC3-216ENST00000497171 ZBTB7AO95365 584 aa5.47□□□□□ -1.53
PHC3-216ENST00000497171 CTSHP09668 335 aa5.47□□□□□ -1.53
PHC3-216ENST00000497171 GLI4P10075 376 aa5.47□□□□□ -1.53
PHC3-216ENST00000497171 NME1P15531 152 aaKnown RBP5.47□□□□□ -1.53
PHC3-216ENST00000497171 SMAD4Q13485 552 aaKnown RBP5.47□□□□□ -1.53
PHC3-216ENST00000497171 FAM26FQ5R3K3 315 aa5.47□□□□□ -1.53
PHC3-216ENST00000497171 PTCHD1Q96NR3 888 aa5.47□□□□□ -1.53
PHC3-216ENST00000497171 NOX5Q96PH1 765 aa5.47□□□□□ -1.53
PHC3-216ENST00000497171 SPATA6Q9NWH7 488 aaPredicted RBP5.47□□□□□ -1.53
PHC3-216ENST00000497171 SUCOQ9UBS9 1254 aaKnown RBP5.47□□□□□ -1.53
PHC3-216ENST00000497171 VTI1BQ9UEU0 232 aa5.47□□□□□ -1.53
PHC3-216ENST00000497171 SF3B6Q9Y3B4 125 aaKnown RBP5.47□□□□□ -1.53
PHC3-216ENST00000497171 MROH6A6NGR9 719 aa5.46□□□□□ -1.54
PHC3-216ENST00000497171 H0Y8X5 98 aa5.46□□□□□ -1.54
PHC3-216ENST00000497171 TNFRSF10CO14798 259 aa5.46□□□□□ -1.54
PHC3-216ENST00000497171 SORBS3O60504 671 aa5.46□□□□□ -1.54
PHC3-216ENST00000497171 GARTP22102 1010 aa5.46□□□□□ -1.54
PHC3-216ENST00000497171 RPL13P26373 211 aaKnown RBP5.46□□□□□ -1.54
PHC3-216ENST00000497171 MCM4P33991 863 aa5.46□□□□□ -1.54
PHC3-216ENST00000497171 ZNF165P49910 485 aa5.46□□□□□ -1.54
PHC3-216ENST00000497171 POU4F1Q01851 419 aa5.46□□□□□ -1.54
PHC3-216ENST00000497171 ZNF326Q5BKZ1 582 aaKnown RBP5.46□□□□□ -1.54
PHC3-216ENST00000497171 GK5Q6ZS86 529 aa5.46□□□□□ -1.54
PHC3-216ENST00000497171 PLEKHH3Q7Z736 793 aa5.46□□□□□ -1.54
PHC3-216ENST00000497171 LZTR1Q8N653 840 aa5.46□□□□□ -1.54
PHC3-216ENST00000497171 SMARCC1Q92922 1105 aaPredicted RBP5.46□□□□□ -1.54
PHC3-216ENST00000497171 CD3EP07766 207 aa5.45□□□□□ -1.54
PHC3-216ENST00000497171 REXO1Q8N1G1 1221 aaKnown RBP5.45□□□□□ -1.54
PHC3-216ENST00000497171 BCAS3Q9H6U6 928 aa5.45□□□□□ -1.54
PHC3-216ENST00000497171 KBTBD4Q9NVX7 518 aa5.45□□□□□ -1.54
PHC3-216ENST00000497171 MEIS3P2A8K0S8 358 aa5.44□□□□□ -1.54
PHC3-216ENST00000497171 E9PSI1 815 aa5.44□□□□□ -1.54
PHC3-216ENST00000497171 LAMTOR5O43504 91 aa5.44□□□□□ -1.54
PHC3-216ENST00000497171 EIF4A3P38919 411 aaKnown RBP5.44□□□□□ -1.54
PHC3-216ENST00000497171 SEZ6Q53EL9 994 aa5.44□□□□□ -1.54
PHC3-216ENST00000497171 FBXL19Q6PCT2 694 aa5.44□□□□□ -1.54
PHC3-216ENST00000497171 Q8N1X5 172 aa5.44□□□□□ -1.54
PHC3-216ENST00000497171 LINC00482Q8N8I6 264 aa5.44□□□□□ -1.54
PHC3-216ENST00000497171 USP33Q8TEY7 942 aa5.44□□□□□ -1.54
PHC3-216ENST00000497171 DDX11Q96FC9 970 aa5.44□□□□□ -1.54
PHC3-216ENST00000497171 LCORQ96JN0 433 aaPredicted RBP5.44□□□□□ -1.54
PHC3-216ENST00000497171 KLC2Q9H0B6 622 aa5.44□□□□□ -1.54
PHC3-216ENST00000497171 DEF6Q9H4E7 631 aa5.44□□□□□ -1.54
PHC3-216ENST00000497171 RXFP1Q9HBX9 757 aa5.44□□□□□ -1.54
PHC3-216ENST00000497171 FHOD1Q9Y613 1164 aa5.44□□□□□ -1.54
PHC3-216ENST00000497171 ITGA4P13612 1032 aa5.43□□□□□ -1.54
PHC3-216ENST00000497171 ZNF16P17020 682 aaPredicted RBP5.43□□□□□ -1.54
PHC3-216ENST00000497171 TAGLNQ01995 201 aaKnown RBP5.43□□□□□ -1.54
PHC3-216ENST00000497171 EEF1DP3Q658K8 133 aa5.43□□□□□ -1.54
PHC3-216ENST00000497171 LIMS2Q7Z4I7 341 aa5.43□□□□□ -1.54
PHC3-216ENST00000497171 ZC3H18Q86VM9 953 aaKnown RBP5.43□□□□□ -1.54
PHC3-216ENST00000497171 FIBCD1Q8N539 461 aa5.43□□□□□ -1.54
PHC3-216ENST00000497171 TTLL6Q8N841 843 aa5.43□□□□□ -1.54
PHC3-216ENST00000497171 BRF1Q92994 677 aa5.43□□□□□ -1.54
PHC3-216ENST00000497171 MRRFQ96E11 262 aaKnown RBP5.43□□□□□ -1.54
PHC3-216ENST00000497171 FAM161BQ96MY7 647 aa5.43□□□□□ -1.54
PHC3-216ENST00000497171 ZNF747Q9BV97 191 aa5.43□□□□□ -1.54
PHC3-216ENST00000497171 BCL11AQ9H165 835 aa5.43□□□□□ -1.54
PHC3-216ENST00000497171 KCNQ5Q9NR82 932 aa5.43□□□□□ -1.54
PHC3-216ENST00000497171 NPEPPSL1A6NEC2 478 aa5.42□□□□□ -1.54
PHC3-216ENST00000497171 THBS2P35442 1172 aa5.42□□□□□ -1.54
PHC3-216ENST00000497171 PMS1P54277 932 aaKnown RBP5.42□□□□□ -1.54
PHC3-216ENST00000497171 APOBRQ0VD83 1088 aa5.42□□□□□ -1.54
PHC3-216ENST00000497171 MCTP2Q6DN12 878 aa5.42□□□□□ -1.54
PHC3-216ENST00000497171 CIR1Q86X95 450 aaPredicted RBP5.42□□□□□ -1.54
PHC3-216ENST00000497171 KYQ8NBH2 561 aa5.42□□□□□ -1.54
PHC3-216ENST00000497171 RNF34Q969K3 372 aa5.42□□□□□ -1.54
PHC3-216ENST00000497171 FCRL3Q96P31 734 aaPredicted RBP5.42□□□□□ -1.54
PHC3-216ENST00000497171 PCED1AQ9H1Q7 454 aa5.42□□□□□ -1.54
PHC3-216ENST00000497171 GP6Q9HCN6 339 aa5.42□□□□□ -1.54
PHC3-216ENST00000497171 TCAF1Q9Y4C2 921 aa5.42□□□□□ -1.54
PHC3-216ENST00000497171 FAM86C2PA6NEL3 165 aa5.41□□□□□ -1.54
PHC3-216ENST00000497171 GREM1O60565 184 aa5.41□□□□□ -1.54
PHC3-216ENST00000497171 AMHP03971 560 aa5.41□□□□□ -1.54
PHC3-216ENST00000497171 ZNF445P59923 1031 aa5.41□□□□□ -1.54
PHC3-216ENST00000497171 CLCQ05315 142 aa5.41□□□□□ -1.54
PHC3-216ENST00000497171 WWC2Q6AWC2 1192 aa5.41□□□□□ -1.54
PHC3-216ENST00000497171 ETV3LQ6ZN32 361 aa5.41□□□□□ -1.54
PHC3-216ENST00000497171 ZNF296Q8WUU4 475 aaPredicted RBP5.41□□□□□ -1.54
PHC3-216ENST00000497171 ZDHHC15Q96MV8 337 aa5.41□□□□□ -1.54
PHC3-216ENST00000497171 SLC9A7Q96T83 725 aa5.41□□□□□ -1.54
PHC3-216ENST00000497171 GORASP1Q9BQQ3 440 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms