RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 UMODL1Q5DID0 1318 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 MOXD2PA6NHM9 499 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 USP17L12C9JPN9 530 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 USP17L21D6R901 530 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 AXIN1O15169 862 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 WFS1O76024 890 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 ASGR1P07306 291 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 IGFBP4P22692 258 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 CYP2C18P33260 490 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 ADD2P35612 726 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 SMCPP49901 116 aaPredicted RBP8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 BEX3Q00994 111 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 PPIGQ13427 754 aaKnown RBP eCLIP8.33□□□□□ -1.083e-9■□□□□ 9.2
CHCHD3-206ENST00000496427 C12orf60Q5U649 245 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 MFSD5Q6N075 450 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 ZNF365Q70YC5 407 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 ERC1Q8IUD2 1116 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 CYP4X1Q8N118 509 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 CPXCR1Q8N123 301 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 MICALL1Q8N3F8 863 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 PANK1Q8TE04 598 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 ADAMTS19Q8TE59 1207 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 NUP133Q8WUM0 1156 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 NECAB3Q96P71 396 aaPredicted RBP8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 TSEN34Q9BSV6 310 aaKnown RBP8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 BOLA2Q9H3K6 86 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 GOPCQ9HD26 462 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 PAG1Q9NWQ8 432 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 TOR4AQ9NXH8 423 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 CXXC1Q9P0U4 656 aaPredicted RBP8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 FAM184BQ9ULE4 1060 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 DIS3Q9Y2L1 958 aaKnown RBP8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 DDX49Q9Y6V7 483 aaKnown RBP8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 XIRP2A4UGR9 3374 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 MYH7BA7E2Y1 1941 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 ATG2AQ2TAZ0 1938 aa8.33□□□□□ -1.08
CHCHD3-206ENST00000496427 ZBED9Q6R2W3 1325 aa8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 SYNGAP1Q96PV0 1343 aa8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 SIP14410 1827 aa8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 DNAJC25-GNG10A0A024R161 153 aa8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 CDK7P50613 346 aa8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 CCDC144BQ3MJ40 725 aa8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 RASIP1Q5U651 963 aa8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 TMED8Q6PL24 325 aaPredicted RBP8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 FAM126BQ8IXS8 530 aa8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 VTI1AQ96AJ9 217 aa8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 CHMP4CQ96CF2 233 aa8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 DDX11Q96FC9 970 aa8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 CCDC17Q96LX7 622 aa8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 GLT1D1Q96MS3 346 aa8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 TOX2Q96NM4 488 aa8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 SLF1Q9BQI6 1058 aa8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 TEX13BQ9BXU2 312 aa8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 RAVER2Q9HCJ3 691 aaKnown RBP8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 ATP8A2Q9NTI2 1148 aa8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 STK17AQ9UEE5 414 aa8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 YBX2Q9Y2T7 364 aaKnown RBP8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 SLC4A4Q9Y6R1 1079 aa8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 KIAA1217Q5T5P2 1943 aa8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 BDP1A6H8Y1 2624 aa8.32□□□□□ -1.08
CHCHD3-206ENST00000496427 SCN10AQ9Y5Y9 1956 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 ASTN1O14525 1302 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 MROH7Q68CQ1 1323 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 TRANK1O15050 2925 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 A0A0U1RQG5 324 aaPredicted RBP8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 ARVCFO00192 962 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 CTAGE5O15320 804 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 DUSP11O75319 330 aaKnown RBP8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 NDUFB10O96000 172 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 IFIT2P09913 472 aaKnown RBP8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 MYOGP15173 224 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 RASA1P20936 1047 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 CST5P28325 142 aaPredicted RBP8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 COPB2P35606 906 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 RABGGTBP53611 331 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 ACVR2BQ13705 512 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 CTR9Q6PD62 1173 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 PSRC1Q6PGN9 363 aaPredicted RBP8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 ARMCX2Q7L311 632 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 AMOTL1Q8IY63 956 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 CLASRPQ8N2M8 674 aaKnown RBP8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 TMEM199Q8N511 208 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 KIFC2Q96AC6 838 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 ASB2Q96Q27 587 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 UHRF1Q96T88 793 aaPredicted RBP8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 KATNBL1Q9H079 304 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 PUS7LQ9H0K6 701 aaKnown RBP8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 UPF3AQ9H1J1 476 aaKnown RBP8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 KANSL2Q9H9L4 492 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 HOMER2Q9NSB8 354 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 NLRC5Q86WI3 1866 aa8.31□□□□□ -1.08
CHCHD3-206ENST00000496427 ELP1O95163 1332 aa8.3□□□□□ -1.08
CHCHD3-206ENST00000496427 RBAK-RBAKDNI3L0D1 243 aa8.3□□□□□ -1.08
CHCHD3-206ENST00000496427 TLR3O15455 904 aaKnown RBP8.3□□□□□ -1.08
CHCHD3-206ENST00000496427 CCL23P55773 120 aa8.3□□□□□ -1.08
CHCHD3-206ENST00000496427 GJA9P57773 515 aa8.3□□□□□ -1.08
CHCHD3-206ENST00000496427 INSM1Q01101 510 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms