RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 RANBP6O60518 1105 aaKnown RBP16.85■□□□□ 0.29
VARS-228ENST00000495010 ICAM1P05362 532 aa16.85■□□□□ 0.29
VARS-228ENST00000495010 FAM47CQ5HY64 1035 aa16.85■□□□□ 0.29
VARS-228ENST00000495010 DEFB128Q7Z7B8 93 aa16.85■□□□□ 0.29
VARS-228ENST00000495010 MPHOSPH6Q99547 160 aaKnown RBP16.85■□□□□ 0.29
VARS-228ENST00000495010 TRMT13Q9NUP7 481 aaKnown RBP16.85■□□□□ 0.29
VARS-228ENST00000495010 TNKSO95271 1327 aa16.85■□□□□ 0.29
VARS-228ENST00000495010 TTC41PQ6P2S7 1318 aa16.85■□□□□ 0.29
VARS-228ENST00000495010 PTPDC1A2A3K4 754 aa16.84■□□□□ 0.29
VARS-228ENST00000495010 CYP2C9P11712 490 aa16.84■□□□□ 0.29
VARS-228ENST00000495010 ALDH5A1P51649 535 aaPredicted RBP16.84■□□□□ 0.29
VARS-228ENST00000495010 CTDSPL2Q05D32 466 aa16.84■□□□□ 0.29
VARS-228ENST00000495010 BAATQ14032 418 aaPredicted RBP16.84■□□□□ 0.29
VARS-228ENST00000495010 TMEM63BQ5T3F8 832 aa16.84■□□□□ 0.29
VARS-228ENST00000495010 C20orf194Q5TEA3 1177 aa16.84■□□□□ 0.29
VARS-228ENST00000495010 RETREG2Q8NC44 543 aa16.84■□□□□ 0.29
VARS-228ENST00000495010 OR6J1Q8NGC5 347 aa16.84■□□□□ 0.29
VARS-228ENST00000495010 MORC4Q8TE76 937 aa16.84■□□□□ 0.29
VARS-228ENST00000495010 DCAF4Q8WV16 495 aa16.84■□□□□ 0.29
VARS-228ENST00000495010 PURBQ96QR8 312 aaKnown RBP16.84■□□□□ 0.29
VARS-228ENST00000495010 MTG1Q9BT17 334 aaPredicted RBP16.84■□□□□ 0.29
VARS-228ENST00000495010 RAD50Q92878 1312 aa16.84■□□□□ 0.29
VARS-228ENST00000495010 LOC102724159A0A0B4J2E5 919 aa16.83■□□□□ 0.28
VARS-228ENST00000495010 LRRC37A2A6NM11 1700 aa16.83■□□□□ 0.28
VARS-228ENST00000495010 NMT2O60551 498 aa16.83■□□□□ 0.28
VARS-228ENST00000495010 TTLL4Q14679 1199 aa16.83■□□□□ 0.28
VARS-228ENST00000495010 PWP2Q15269 919 aaKnown RBP16.83■□□□□ 0.28
VARS-228ENST00000495010 ZMYM1Q5SVZ6 1142 aa16.83■□□□□ 0.28
VARS-228ENST00000495010 IL17RBQ9NRM6 502 aa16.83■□□□□ 0.28
VARS-228ENST00000495010 TOMM22Q9NS69 142 aa16.83■□□□□ 0.28
VARS-228ENST00000495010 RAPGEFL1Q9UHV5 662 aa16.83■□□□□ 0.28
VARS-228ENST00000495010 KIF28PB7ZC32 967 aa16.82■□□□□ 0.28
VARS-228ENST00000495010 CA3P07451 260 aa16.82■□□□□ 0.28
VARS-228ENST00000495010 CALML3P27482 149 aa16.82■□□□□ 0.28
VARS-228ENST00000495010 RFC2P35250 354 aa16.82■□□□□ 0.28
VARS-228ENST00000495010 SLC16A2P36021 539 aa16.82■□□□□ 0.28
VARS-228ENST00000495010 PURAQ00577 322 aaKnown RBP16.82■□□□□ 0.28
VARS-228ENST00000495010 PDE4DQ08499 809 aa16.82■□□□□ 0.28
VARS-228ENST00000495010 SLC9A7Q96T83 725 aa16.82■□□□□ 0.28
VARS-228ENST00000495010 C1QTNF1Q9BXJ1 281 aa16.82■□□□□ 0.28
VARS-228ENST00000495010 FTOQ9C0B1 505 aaKnown RBP eCLIP16.82■□□□□ 0.28
VARS-228ENST00000495010 RANBP17Q9H2T7 1088 aaKnown RBP16.82■□□□□ 0.28
VARS-228ENST00000495010 CERS4Q9HA82 394 aa16.82■□□□□ 0.28
VARS-228ENST00000495010 INCENPQ9NQS7 918 aa16.82■□□□□ 0.28
VARS-228ENST00000495010 NOD1Q9Y239 953 aa16.82■□□□□ 0.28
VARS-228ENST00000495010 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.82■□□□□ 0.28
VARS-228ENST00000495010 NKRFO15226 690 aaKnown RBP eCLIP16.81■□□□□ 0.28
VARS-228ENST00000495010 KPNA6O60684 536 aa16.81■□□□□ 0.28
VARS-228ENST00000495010 TFF2Q03403 129 aa16.81■□□□□ 0.28
VARS-228ENST00000495010 NBPF20Q3BBV1 942 aa16.81■□□□□ 0.28
VARS-228ENST00000495010 SYDE2Q5VT97 1194 aa16.81■□□□□ 0.28
VARS-228ENST00000495010 TTBK2Q6IQ55 1244 aa16.81■□□□□ 0.28
VARS-228ENST00000495010 RASGRP2Q7LDG7 609 aa16.81■□□□□ 0.28
VARS-228ENST00000495010 FAM122AQ96E09 287 aa16.81■□□□□ 0.28
VARS-228ENST00000495010 GPCPD1Q9NPB8 672 aa16.81■□□□□ 0.28
VARS-228ENST00000495010 PNMA2Q9UL42 364 aa16.81■□□□□ 0.28
VARS-228ENST00000495010 FRMPD2Q68DX3 1309 aaPredicted RBP16.8■□□□□ 0.28
VARS-228ENST00000495010 B4DLN1 442 aa16.8■□□□□ 0.28
VARS-228ENST00000495010 RFXAPO00287 272 aa16.8■□□□□ 0.28
VARS-228ENST00000495010 NFIBO00712 420 aa16.8■□□□□ 0.28
VARS-228ENST00000495010 BMP1P13497 986 aa16.8■□□□□ 0.28
VARS-228ENST00000495010 MRPL12P52815 198 aaKnown RBP16.8■□□□□ 0.28
VARS-228ENST00000495010 CHMP4BP1P59074 171 aa16.8■□□□□ 0.28
VARS-228ENST00000495010 BFSP2Q13515 415 aa16.8■□□□□ 0.28
VARS-228ENST00000495010 PPP2R5BQ15173 497 aa16.8■□□□□ 0.28
VARS-228ENST00000495010 DIEXFQ68CQ4 756 aaKnown RBP16.8■□□□□ 0.28
VARS-228ENST00000495010 RNF207Q6ZRF8 634 aa16.8■□□□□ 0.28
VARS-228ENST00000495010 PHOSPHO2Q8TCD6 241 aa16.8■□□□□ 0.28
VARS-228ENST00000495010 PI4K2BQ8TCG2 481 aa16.8■□□□□ 0.28
VARS-228ENST00000495010 NECAB3Q96P71 396 aaPredicted RBP16.8■□□□□ 0.28
VARS-228ENST00000495010 ZBTB47Q9UFB7 747 aaPredicted RBP16.8■□□□□ 0.28
VARS-228ENST00000495010 MTCH2Q9Y6C9 303 aa16.8■□□□□ 0.28
VARS-228ENST00000495010 RBM47A0AV96 593 aaKnown RBP16.79■□□□□ 0.28
VARS-228ENST00000495010 TOP1P11387 765 aaKnown RBP16.79■□□□□ 0.28
VARS-228ENST00000495010 KCNQ1P51787 676 aa16.79■□□□□ 0.28
VARS-228ENST00000495010 RRP12Q5JTH9 1297 aaKnown RBP16.79■□□□□ 0.28
VARS-228ENST00000495010 NFRKBQ6P4R8 1299 aa16.79■□□□□ 0.28
VARS-228ENST00000495010 BTNL9Q6UXG8 535 aa16.79■□□□□ 0.28
VARS-228ENST00000495010 ARNTL2Q8WYA1 636 aa16.79■□□□□ 0.28
VARS-228ENST00000495010 VWCEQ96DN2 955 aa16.79■□□□□ 0.28
VARS-228ENST00000495010 ANAPC4Q9UJX5 808 aa16.79■□□□□ 0.28
VARS-228ENST00000495010 COG5Q9UP83 839 aa16.79■□□□□ 0.28
VARS-228ENST00000495010 PITPNM1O00562 1244 aa16.78■□□□□ 0.28
VARS-228ENST00000495010 ORC4O43929 436 aa16.78■□□□□ 0.28
VARS-228ENST00000495010 IQCF3P0C7M6 154 aa16.78■□□□□ 0.28
VARS-228ENST00000495010 POU3F3P20264 500 aaPredicted RBP16.78■□□□□ 0.28
VARS-228ENST00000495010 MX1P20591 662 aa16.78■□□□□ 0.28
VARS-228ENST00000495010 PLA2G5P39877 138 aa16.78■□□□□ 0.28
VARS-228ENST00000495010 KCNJ6P48051 423 aa16.78■□□□□ 0.28
VARS-228ENST00000495010 PTPN11Q06124 597 aaPredicted RBP16.78■□□□□ 0.28
VARS-228ENST00000495010 SLC30A10Q6XR72 485 aa16.78■□□□□ 0.28
VARS-228ENST00000495010 CCDC155Q8N6L0 562 aa16.78■□□□□ 0.28
VARS-228ENST00000495010 SCFD2Q8WU76 684 aa16.78■□□□□ 0.28
VARS-228ENST00000495010 TCF20Q9UGU0 1960 aaKnown RBP16.78■□□□□ 0.28
VARS-228ENST00000495010 TXNP10599 105 aaKnown RBP16.77■□□□□ 0.28
VARS-228ENST00000495010 HERC6Q8IVU3 1022 aa16.77■□□□□ 0.28
VARS-228ENST00000495010 DNERQ8NFT8 737 aa16.77■□□□□ 0.28
VARS-228ENST00000495010 PPP1R13LQ8WUF5 828 aa16.77■□□□□ 0.28
VARS-228ENST00000495010 TMEM47Q9BQJ4 181 aa16.77■□□□□ 0.28
VARS-228ENST00000495010 LCTP09848 1927 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms