RNA–Protein interactions for RNA: ENST00000493335.5

SMTN-219, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-219ENST00000493335 GFPT1Q06210 699 aaPredicted RBP16.42■□□□□ 0.22
SMTN-219ENST00000493335 NNTQ13423 1086 aa16.42■□□□□ 0.22
SMTN-219ENST00000493335 TTMPQ5BVD1 217 aa16.42■□□□□ 0.22
SMTN-219ENST00000493335 SWT1Q5T5J6 900 aaKnown RBP16.42■□□□□ 0.22
SMTN-219ENST00000493335 PROCA1Q8NCQ7 364 aaPredicted RBP16.42■□□□□ 0.22
SMTN-219ENST00000493335 ZIM3Q96PE6 472 aa16.42■□□□□ 0.22
SMTN-219ENST00000493335 VAT1LQ9HCJ6 419 aa16.42■□□□□ 0.22
SMTN-219ENST00000493335 EPB41L5Q9HCM4 733 aa16.42■□□□□ 0.22
SMTN-219ENST00000493335 TCP11L1Q9NUJ3 509 aa16.42■□□□□ 0.22
SMTN-219ENST00000493335 STIM2Q9P246 746 aa16.42■□□□□ 0.22
SMTN-219ENST00000493335 ARHGAP20Q9P2F6 1191 aa16.42■□□□□ 0.22
SMTN-219ENST00000493335 STX8Q9UNK0 236 aa16.42■□□□□ 0.22
SMTN-219ENST00000493335 ADAMTS7Q9UKP4 1686 aa16.42■□□□□ 0.22
SMTN-219ENST00000493335 TECP42680 631 aa16.42■□□□□ 0.22
SMTN-219ENST00000493335 CARSP49589 748 aaKnown RBP16.42■□□□□ 0.22
SMTN-219ENST00000493335 CFAP58Q5T655 872 aa16.42■□□□□ 0.22
SMTN-219ENST00000493335 CCDC170Q8IYT3 715 aa16.42■□□□□ 0.22
SMTN-219ENST00000493335 NUP58Q9BVL2 599 aa16.42■□□□□ 0.22
SMTN-219ENST00000493335 AKAP11Q9UKA4 1901 aa16.41■□□□□ 0.22
SMTN-219ENST00000493335 ANO9A1A5B4 782 aa16.41■□□□□ 0.22
SMTN-219ENST00000493335 FTCDO95954 541 aa16.41■□□□□ 0.22
SMTN-219ENST00000493335 HNRNPH1P31943 449 aaKnown RBP16.41■□□□□ 0.22
SMTN-219ENST00000493335 SEC24CP53992 1094 aa16.41■□□□□ 0.22
SMTN-219ENST00000493335 MEA1Q16626 185 aa16.41■□□□□ 0.22
SMTN-219ENST00000493335 PFKFB3Q16875 520 aaPredicted RBP16.41■□□□□ 0.22
SMTN-219ENST00000493335 MCTP2Q6DN12 878 aa16.41■□□□□ 0.22
SMTN-219ENST00000493335 CABP7Q86V35 215 aa16.41■□□□□ 0.22
SMTN-219ENST00000493335 SLC4A9Q96Q91 983 aa16.41■□□□□ 0.22
SMTN-219ENST00000493335 KANSL2Q9H9L4 492 aa16.41■□□□□ 0.22
SMTN-219ENST00000493335 SUFUQ9UMX1 484 aa16.41■□□□□ 0.22
SMTN-219ENST00000493335 GOLGA8KD6RF30 607 aa16.41■□□□□ 0.22
SMTN-219ENST00000493335 CCNT1O60563 726 aaKnown RBP16.41■□□□□ 0.22
SMTN-219ENST00000493335 ATP2C2O75185 946 aa16.41■□□□□ 0.22
SMTN-219ENST00000493335 HLTFQ14527 1009 aaKnown RBP eCLIP16.41■□□□□ 0.22
SMTN-219ENST00000493335 TXNRD1Q16881 649 aa16.41■□□□□ 0.22
SMTN-219ENST00000493335 LRRC15Q8TF66 581 aa16.41■□□□□ 0.22
SMTN-219ENST00000493335 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.41■□□□□ 0.22
SMTN-219ENST00000493335 HYOU1Q9Y4L1 999 aa16.41■□□□□ 0.22
SMTN-219ENST00000493335 LRRC53A6NM62 1247 aa16.4■□□□□ 0.22
SMTN-219ENST00000493335 KLRC4O43908 158 aa16.4■□□□□ 0.22
SMTN-219ENST00000493335 FAM153BP0C7A2 387 aa16.4■□□□□ 0.22
SMTN-219ENST00000493335 RCAN1P53805 252 aa16.4■□□□□ 0.22
SMTN-219ENST00000493335 EPHB4P54760 987 aa16.4■□□□□ 0.22
SMTN-219ENST00000493335 FAM153CQ494X1 144 aa16.4■□□□□ 0.22
SMTN-219ENST00000493335 CCDC152Q4G0S7 254 aa16.4■□□□□ 0.22
SMTN-219ENST00000493335 FNBP4Q8N3X1 1017 aaPredicted RBP16.4■□□□□ 0.22
SMTN-219ENST00000493335 GIMAP8Q8ND71 665 aaPredicted RBP16.4■□□□□ 0.22
SMTN-219ENST00000493335 TSGA10Q9BZW7 698 aa16.4■□□□□ 0.22
SMTN-219ENST00000493335 MCM9Q9NXL9 1143 aa16.4■□□□□ 0.22
SMTN-219ENST00000493335 FAM153AQ9UHL3 310 aa16.4■□□□□ 0.22
SMTN-219ENST00000493335 SALL4Q9UJQ4 1053 aa16.4■□□□□ 0.22
SMTN-219ENST00000493335 HEXIM1O94992 359 aaKnown RBP16.4■□□□□ 0.22
SMTN-219ENST00000493335 CYP19A1P11511 503 aaPredicted RBP16.4■□□□□ 0.22
SMTN-219ENST00000493335 CALML3P27482 149 aa16.4■□□□□ 0.22
SMTN-219ENST00000493335 KLHL7Q8IXQ5 586 aa16.4■□□□□ 0.22
SMTN-219ENST00000493335 SH2D4AQ9H788 454 aa16.4■□□□□ 0.22
SMTN-219ENST00000493335 PPANQ9NQ55 473 aaKnown RBP16.4■□□□□ 0.22
SMTN-219ENST00000493335 NIP7Q9Y221 180 aaKnown RBP eCLIP16.4■□□□□ 0.22
SMTN-219ENST00000493335 NID2Q14112 1375 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 DDAH1O94760 285 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 CCNE1P24864 410 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 TRAPPC10P48553 1259 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 LRRC41Q15345 812 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 HAUS3Q68CZ6 603 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 BICDL1Q6ZP65 573 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 RIOK1Q9BRS2 568 aaKnown RBP16.39■□□□□ 0.21
SMTN-219ENST00000493335 ECM29Q5VYK3 1845 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 GRIN2DO15399 1336 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 BICDL2A1A5D9 508 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 SHOX2O60902 331 aaPredicted RBP16.39■□□□□ 0.21
SMTN-219ENST00000493335 SSBP05455 408 aaKnown RBP eCLIP16.39■□□□□ 0.21
SMTN-219ENST00000493335 KIF5BP33176 963 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 HSPA2P54652 639 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 TFAP4Q01664 338 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 SATB1Q01826 763 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 TRADDQ15628 312 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 ARL6IP4Q66PJ3 421 aaKnown RBP16.39■□□□□ 0.21
SMTN-219ENST00000493335 FAM114A1Q8IWE2 563 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 KRT12Q99456 494 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 TTYH3Q9C0H2 523 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 TFCP2L1Q9NZI6 479 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 BACH1O14867 736 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 RHOBTB3O94955 611 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 GLI1P08151 1106 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 SLC1A4P43007 532 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 SETQ01105 290 aaPredicted RBP16.39■□□□□ 0.21
SMTN-219ENST00000493335 CAVIN4Q5BKX8 364 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 RNPC3Q96LT9 517 aaKnown RBP16.39■□□□□ 0.21
SMTN-219ENST00000493335 JPH2Q9BR39 696 aaPredicted RBP16.39■□□□□ 0.21
SMTN-219ENST00000493335 PCDHA4Q9UN74 947 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 KCPQ6ZWJ8 1503 aa16.39■□□□□ 0.21
SMTN-219ENST00000493335 TCP1P17987 556 aaKnown RBP16.38■□□□□ 0.21
SMTN-219ENST00000493335 TXKP42681 527 aa16.38■□□□□ 0.21
SMTN-219ENST00000493335 PNMA1Q8ND90 353 aa16.38■□□□□ 0.21
SMTN-219ENST00000493335 MTMR8Q96EF0 704 aa16.38■□□□□ 0.21
SMTN-219ENST00000493335 DYNLL2Q96FJ2 89 aa16.38■□□□□ 0.21
SMTN-219ENST00000493335 MYH7P12883 1935 aa16.38■□□□□ 0.21
SMTN-219ENST00000493335 USP17L8P0C7I0 530 aa16.38■□□□□ 0.21
SMTN-219ENST00000493335 EGFL6Q8IUX8 553 aa16.38■□□□□ 0.21
SMTN-219ENST00000493335 C4orf32Q8N8J7 132 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms